Gene

KWMTBOMO01100

Annotation

PREDICTED:_rho-related_GTP-binding_protein_RhoN-like_[Bombyx_mori]

Location

Bomo_Chr3(-):2101009-2121177      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.158 Extracellular   Reliability : 1.679

CDS

ATGTGGTCGAATAGAAAATGCGAAACCGGTACAGCTGGTACTCCTACAGCAGAAGAAGAGATCAAAGTAGTCCTTGTAGGAGATACTCAGTGTGGGAAGACGTCGCTGGTCCAAAGATTTGTGTCCGATACATTTATTGAGGCCTACACTCCGACCGGCTTCGAGAAGTACAGCTACACATGCTCAGTGGCCGATTACAAAGTAAACTTTTCAATCTGGGATACGTCCGGAACGACGTCCTACGACACGGTCAGACCTTTAGCGTACCAAGACGCGAAGCTGTTTATGCTGTGCTTCAACGTAGCCGAACCTGAGACCTTACACAACGCCGCAGCCAAATGGTACAAGGAGGTGAGGACCCACGGTGGCTCAGCGCCTGTGGTTCTGTGCGGATGCAAAGCGGACCTGAGACACGACAAGGAAACGCTCACAGTTCTGTCCAAACTAAAAACACATCCAGTCACCAGTGAAGAGTAG

Protein

MWSNRKCETGTAGTPTAEEEIKVVLVGDTQCGKTSLVQRFVSDTFIEAYTPTGFEKYSYTCSVADYKVNFSIWDTSGTTSYDTVRPLAYQDAKLFMLCFNVAEPETLHNAAAKWYKEVRTHGGSAPVVLCGCKADLRHDKETLTVLSKLKTHPVTSEE

Uniprot

A0A212FJ52   A0A194R6K8   A0A2H1V979   A0A2A4JEL7   A0A2P8Z5H8   A0A0N1IN71   + More
A0A1B6CR53   A0A2J7PI92   A0A067QJ14   A0A1W7R9T0   T1JA45   T1JA46   A0A087SZL0   K1QCI4   V5GVZ3   B7P1J6   A0A131XVL3   A0A293M309   A0A1Z5L7L5   A0A2R5LKR0   A0A1E1XKQ6   A0A0K8RNM7   A0A1E1X8G6   A0A224Z010   L7MFP7   A0A0N9HHJ4   A0A0N9HGZ5   C3YW53   V3ZMI5   A0A2D0S7T4   A0A2T7P8L3   A0A3B4DT00   A0A3P8XQQ9   A0A3B1JG08   A0A3B4DZ49   H3AP85   A0A3P9KJZ8   A0A3P9H1M9   W5UE43   A0A3B3H890   A0A2D4FCE1   A0A3P8WI60   A0A1S3NFK8   A0A3B5AXM9   I3IX41   A0A3B4G3S8   A0A3P8NBX6   A0A3P9D8K5   A0A0B7A8L5   A0A3N0Y237   A0A2I4CDW9   A0A2C9LHN7   G1KNT4   F1RCR8   Q0P4B0   A0A3B3VGS3   A0A3P9NS29   A0A3B5Q347   A0A1W5AWK4   W5N058   A0A087XT01   G3P321   A0A151PC09   A0A1U7RVF4   A0A3P8YNC6   A0A3P9AA65   H3BB75   A0A1A7WKW7   A0A1A8RK84   A0A1A8QIT7   A0A1A8E1Y4   A0A1A8FQ43   A0A1A8V9F3   A0A2U9CM92   A0A3B4VPK7   H0YXC3   A0A3B3ZEF9   A0A3P8RXS3   A0A1S3R848   H2LIC6   A0A3P9IAG4   A0A0B7A6C1   A0A2U9CT72   A0A0P6JDM6   A0A3B3D1B3   A0A146W456   A0A3B3BJ30   A0A1S3GF04   A0A286XMT5   A0A3B3DYV4   H3AP86   H2UY56   H2MA67   I3LQJ8   A0A3P8VFY0   A0A0S7L170   A0A2P4TG55   A0A226MJ23   A0A3M0JKQ7   A0A226NUX2  

Pubmed

22118469    26354079    29403074    24845553    22992520    25765539    + More
28528879    29209593    28503490    28797301    25576852    26633655    28812685    18563158    23254933    25069045    25329095    9215903    17554307    23127152    24487278    25186727    15562597    23594743    23542700    22293439    20360741    25463417    29451363    21993624    21551351    24621616   

EMBL

AGBW02008315    OWR53761.1    KQ460685    KPJ12875.1    ODYU01001335    SOQ37377.1    + More
NWSH01001863    PCG69880.1    PYGN01000186    PSN51753.1    KQ459072    KPJ03843.1    GEDC01021411    JAS15887.1    NEVH01025128    PNF16060.1    KK853461    KDR07480.1    GFAH01000489    JAV47900.1    JH431984    KK112695    KFM58299.1    JH817257    EKC19221.1    GANP01009923    JAB74545.1    ABJB010491955    ABJB010744779    ABJB010797205    ABJB010901470    ABJB010961825    DS616900    EEC00468.1    GEFM01005548    JAP70248.1    GFWV01008646    MAA33375.1    GFJQ02003611    JAW03359.1    GGLE01005977    MBY10103.1    GFAA01003650    JAT99784.1    GADI01001157    JAA72651.1    GFAC01003633    JAT95555.1    GFPF01008204    MAA19350.1    GACK01001998    JAA63036.1    KT037725    KT037743    ALG00090.1    KT037734    KT037752    NEDP02003109    ALG00117.1    OWF49441.1    GG666559    EEN55507.1    KB204047    ESO82046.1    PZQS01000005    PVD29746.1    AFYH01167400    AFYH01167401    AFYH01167402    AFYH01167403    AFYH01167404    JT407398    AHH37972.1    IACJ01060618    LAA44896.1    AERX01007585    HACG01029465    CEK76330.1    RJVU01053643    ROL27933.1    BX572620    CR855865    BX901909    BX936331    BC122188    BC165068    AAI22189.1    AAI65068.1    AHAT01022968    AHAT01022969    AYCK01007245    AKHW03000499    KYO46469.1    AFYH01034171    AFYH01034172    AFYH01034173    AFYH01034174    HADW01004841    HADX01010466    SBP06241.1    HAEH01015199    HAEI01008717    SBS05783.1    HAEF01007803    HAEG01012696    SBR93014.1    HADZ01011103    HAEA01011503    SBQ39983.1    HAEB01014369    HAEC01005629    SBQ60896.1    HADY01017202    HAEJ01015750    SBS56207.1    CP026260    AWP17744.1    ABQF01052718    ABQF01052719    ABQF01052720    ABQF01052721    HACG01029463    CEK76328.1    CP026261    AWP19323.1    GEBF01001544    JAO02089.1    GCES01062514    JAR23809.1    AAKN02042423    AEMK02000080    GBYX01189704    JAO83280.1    PPHD01000557    POI35336.1    MCFN01000771    OXB55282.1    QRBI01000137    RMC01513.1    AWGT02000662    OXB71112.1   

Proteomes

UP000007151    UP000053240    UP000218220    UP000245037    UP000053268    UP000235965    + More
UP000027135    UP000054359    UP000005408    UP000001555    UP000242188    UP000001554    UP000030746    UP000221080    UP000245119    UP000261440    UP000265140    UP000018467    UP000008672    UP000265180    UP000265200    UP000001038    UP000265120    UP000087266    UP000261400    UP000005207    UP000261460    UP000265100    UP000265160    UP000192220    UP000076420    UP000001646    UP000000437    UP000261500    UP000242638    UP000002852    UP000192224    UP000018468    UP000028760    UP000007635    UP000050525    UP000189705    UP000246464    UP000261420    UP000007754    UP000261520    UP000265080    UP000261560    UP000081671    UP000005447    UP000005226    UP000008227    UP000198323    UP000269221    UP000198419   

PRIDE

L7MFP7   

Pfam

PF00071   Ras

Interpro

IPR005225   Small_GTP-bd_dom        + More
IPR003578   Small_GTPase_Rho       
IPR001806   Small_GTPase       
IPR027417   P-loop_NTPase       
IPR041842   RhoN       

SUPFAM

SSF52540   SSF52540       

CDD

cd04173  Rnd2_Rho7

ProteinModelPortal

A0A212FJ52   A0A194R6K8   A0A2H1V979   A0A2A4JEL7   A0A2P8Z5H8   A0A0N1IN71   + More
A0A1B6CR53   A0A2J7PI92   A0A067QJ14   A0A1W7R9T0   T1JA45   T1JA46   A0A087SZL0   K1QCI4   V5GVZ3   B7P1J6   A0A131XVL3   A0A293M309   A0A1Z5L7L5   A0A2R5LKR0   A0A1E1XKQ6   A0A0K8RNM7   A0A1E1X8G6   A0A224Z010   L7MFP7   A0A0N9HHJ4   A0A0N9HGZ5   C3YW53   V3ZMI5   A0A2D0S7T4   A0A2T7P8L3   A0A3B4DT00   A0A3P8XQQ9   A0A3B1JG08   A0A3B4DZ49   H3AP85   A0A3P9KJZ8   A0A3P9H1M9   W5UE43   A0A3B3H890   A0A2D4FCE1   A0A3P8WI60   A0A1S3NFK8   A0A3B5AXM9   I3IX41   A0A3B4G3S8   A0A3P8NBX6   A0A3P9D8K5   A0A0B7A8L5   A0A3N0Y237   A0A2I4CDW9   A0A2C9LHN7   G1KNT4   F1RCR8   Q0P4B0   A0A3B3VGS3   A0A3P9NS29   A0A3B5Q347   A0A1W5AWK4   W5N058   A0A087XT01   G3P321   A0A151PC09   A0A1U7RVF4   A0A3P8YNC6   A0A3P9AA65   H3BB75   A0A1A7WKW7   A0A1A8RK84   A0A1A8QIT7   A0A1A8E1Y4   A0A1A8FQ43   A0A1A8V9F3   A0A2U9CM92   A0A3B4VPK7   H0YXC3   A0A3B3ZEF9   A0A3P8RXS3   A0A1S3R848   H2LIC6   A0A3P9IAG4   A0A0B7A6C1   A0A2U9CT72   A0A0P6JDM6   A0A3B3D1B3   A0A146W456   A0A3B3BJ30   A0A1S3GF04   A0A286XMT5   A0A3B3DYV4   H3AP86   H2UY56   H2MA67   I3LQJ8   A0A3P8VFY0   A0A0S7L170   A0A2P4TG55   A0A226MJ23   A0A3M0JKQ7   A0A226NUX2  

PDB

2J1L     E-value=6.67556e-31,     Score=329

KEGG

101743819    K07858 Rho family GTPase 2 | (RefSeq) rho-related GTP-binding protein RhoN-like

GO

GO:0005525   GO:0007264   GO:0003924   GO:0030334   GO:0007015   GO:0005938   GO:0007266   GO:0032956   GO:0019901   GO:0005737   GO:0051017   GO:0043231   GO:0008360   GO:0004767   GO:0030950   GO:0032153   GO:0048672   GO:0006825   GO:0016531   GO:0000786   GO:0003677   GO:0005634   GO:0006334   GO:0003779   GO:0016021  

Length:

158

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00102

Exp number, first 60 AAs:

0.00019

Total prob of N-in:

0.39268

outside

1  -  158

 

 

Pi

181.141761

Theta

147.838547

Tajima's D

0.782633

CLR

0.458372

CSRT

0.593770311484426

Interpretation

Uncertain