SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01093
Annotation
PREDICTED:_protein_bicaudal_C_homolog_1-A_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.54
 

Sequence

CDS
ATGAACGCATTGTGTTTTTATACAGCGCTGTCTAACAACAACGAAATAAGTGGACTGCCACAAACGATGTTAATGCAGCAACCCTACCAGCAAGCGCCGGCTGAAAACCGACCCAGCACGCTGAGCCAACTGCTGAACTCGAGCTCGCAGGCGAGCAGCGGCTACCAGAGCAACTTCACCGGCAGCTGCGTCTCCCTTGACGCGCACAACATGTCCGGAGGCGAAGGCAGTAACGTCGGCTCCCCCTCAGTGTCCCCCATCAGCAAGACTCACAGCCCCGCGCACGCCGACGCCGAACGATCCCAAGAGTTGGCTAGTATAATATCGGACATACCGCTGTCCGAGCGGCGCGCTGTGGGCTGCGAGAAGAAGACGCTGGAGACTCTCAACAAGCTGTCGCCCCTCACCGAGTACAGGAAGATGAAGCAGGAAGCCACTAAGGCGATGCGGGAGAGCGTGTGCGGCGGCGGGTACCGGGTGCCCACGCCGCGCTGGGCCGGCTACTACTTCAGCCACACGTCGCCGGGGCCCATCAACCTGCACGATAACGAAGGAATCACTTCGGTTAGCTTCACTAAAACAACATAA
Protein
MNALCFYTALSNNNEISGLPQTMLMQQPYQQAPAENRPSTLSQLLNSSSQASSGYQSNFTGSCVSLDAHNMSGGEGSNVGSPSVSPISKTHSPAHADAERSQELASIISDIPLSERRAVGCEKKTLETLNKLSPLTEYRKMKQEATKAMRESVCGGGYRVPTPRWAGYYFSHTSPGPINLHDNEGITSVSFTKTT

Summary

Pfam
PF00536   SAM_1        + More
PF00013   KH_1
Interpro
IPR013761   SAM/pointed_sf        + More
IPR001660   SAM       
IPR036612   KH_dom_type_1_sf       
IPR009069   Cys_alpha_HP_mot_SF       
IPR004088   KH_dom_type_1       
IPR004087   KH_dom       
SUPFAM
SSF47769   SSF47769        + More
SSF47072   SSF47072       
SSF54791   SSF54791       
Gene 3D

Ontologies

Topology

Length:
195
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.000460000000000001
Exp number, first 60 AAs:
0.00022
Total prob of N-in:
0.06672
outside
1  -  195
 
 

Population Genetic Test Statistics

Pi
196.651238
Theta
161.208949
Tajima's D
0.462111
CLR
0.069449
CSRT
0.503674816259187
Interpretation
Uncertain
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