SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01086
Pre Gene Modal
BGIBMGA007423
Annotation
PREDICTED:_S-adenosylmethionine_decarboxylase_proenzyme_[Bombyx_mori]
Full name
S-adenosylmethionine decarboxylase proenzyme      
Location in the cell
Mitochondrial   Reliability : 1.038
 

Sequence

CDS
ATGTTTGTTTCACGAAGACGCTGGATACTGAAGACATGCGGGACGACCACCCCGCTGCGGTGCGTCCGCGCTGTGCTGGCTCTCGCACAGGACGTGGCGGGCCATTCGTGCGTGCACAACGTGTTCTACTCCAGGAGAGAATTCGCCCGTCCCGAAGTCCAGCTCAAACCGCACGACAACTTTGATTCAGAGGTAAAACTTCTGGATTCATTTTTCGGGGATGGGCGCGCCTATATCATGGGCCCGGAAAAAGACTGTTGGTATTTGTATACCCTGCTGCCGTTGGAAGGTACAGTGGCAGCGGTGGAGAAAGAGCAGCAGGAAGCTGAGTCGGGACGCGGGGAGCCCGACCAGACCATTGAGATTCTCATGTCCGATCTCGATCCTCAGGTCATGGACATATTTACCCGGGAACATTCCCACGATGCTGCGTATGCCACTAAAGAGTCTGGCATAGACAAAATATTACCAGGAATGGTCATAGACGATTTCCTGTTTGACCCCTGCGGCTACTCTATGAACGGGGTCGCTAAAGATGGTTGCTACATGACGATCCACATAACGCCCGAGAGGGCCTGCTCGTACGTGTCGTTCGAGTCCAACGTGCCCGTGTCCAGCTACGACGAGGTGATAGCGCGCGTGCTGGCCGCCTTCCGCCCCGCCAAGTTCGTGCTCACCATCTTCGCCACGCCGGACTCCCCGGCGGCGGACGCGTACCGGCAGCTGCGCAAGTACCGCTCGCTGAGCGCGTACGAGGAGCAGGAGGCGCAGTACTGCCGGTTCTCTGGGTACGAGCTGCAGTACGCGCTGTACTGCAATATATGGCGAGCTCGGCGTGTAGCGCGCAGACTCGCGGGCCGGGGCGGGTCGCCGGCGCAGGCCGCTCCTGAGCGCGGGCCGAAATTATTATCGATGATTTTAAAAATCAAATAA
Protein
MFVSRRRWILKTCGTTTPLRCVRAVLALAQDVAGHSCVHNVFYSRREFARPEVQLKPHDNFDSEVKLLDSFFGDGRAYIMGPEKDCWYLYTLLPLEGTVAAVEKEQQEAESGRGEPDQTIEILMSDLDPQVMDIFTREHSHDAAYATKESGIDKILPGMVIDDFLFDPCGYSMNGVAKDGCYMTIHITPERACSYVSFESNVPVSSYDEVIARVLAAFRPAKFVLTIFATPDSPAADAYRQLRKYRSLSAYEEQEAQYCRFSGYELQYALYCNIWRARRVARRLAGRGGSPAQAAPERGPKLLSMILKIK

Summary

Catalytic Activity
H(+) + S-adenosyl-L-methionine = CO2 + S-adenosyl 3-(methylsulfanyl)propylamine
Cofactor
pyruvate
Similarity
Belongs to the eukaryotic AdoMetDC family.
Keywords
Autocatalytic cleavage   Complete proteome   Decarboxylase   Lyase   Polyamine biosynthesis   Pyruvate   Reference proteome   S-adenosyl-L-methionine   Schiff base   Spermidine biosynthesis   Zymogen  
Feature
chain  S-adenosylmethionine decarboxylase beta chain
EC Number
4.1.1.50
EMBL
BABH01027726    NWSH01002172    PCG68973.1    GDQN01007942    JAT83112.1    KQ459072    + More
KPJ03856.1    KQ460685    KPJ12862.1    ODYU01009000    SOQ53074.1    AGBW02011585    OWR46452.1    NEVH01017557    PNF23869.1    KK852428    KDR24068.1    PNF23870.1    AJWK01014578    AJWK01014579    AJWK01014580    GFDF01006623    JAV07461.1    CVRI01000001    CRK86484.1    CRK86483.1    GANO01001701    JAB58170.1    AAAB01008980    EAA14565.4    AXCM01003770    ATLV01014759    KE524984    KFB39536.1    GALA01001599    JAA93253.1    DS235816    EEB17585.1    KQ971361    EFA07994.1    GEZM01036297    JAV82819.1    GL443653    EFN61772.1    KQ761402    OAD57564.1    GBYB01000518    GBYB01000520    JAG70285.1    JAG70287.1    GBBI01003072    JAC15640.1    UFQT01000114    SSX20224.1    GL768121    EFZ12126.1    JR038906    AEY58449.1    GEBQ01020739    JAT19238.1    GL888116    EGI67056.1    QOIP01000007    RLU20124.1    KQ981147    KYN09106.1    KQ977171    KYN05166.1    ADTU01024665    ADTU01024666    ADTU01024667    ADTU01024668    KQ982883    KYQ49665.1    GECU01036138    GECU01017690    JAS71568.1    JAS90016.1    GECZ01030062    GECZ01014615    JAS39707.1    JAS55154.1    GEDC01018681    JAS18617.1    KK107238    EZA54604.1    KQ976421    KYM89102.1    GL445515    EFN89505.1    KQ981688    KYN37915.1    SSX20223.1    JXJN01021533    GBHO01036570    GBRD01009652    JAG07034.1    JAG56172.1    GALA01001116    JAA93736.1    GEDC01015526    JAS21772.1    CCAG010016028    EZ422822    ADD19098.1    JRES01001143    KNC25159.1    CH940653    EDW62671.2    CAQQ02122322    CP012528    ALC48502.1    JH431303    CH916371    EDV92449.1    KJ136120    AIZ03433.1    CH480818    EDW52407.1    CM000361    EDX04509.1    BT021946    AAX51651.1    APGK01041465    KB740994    ENN75934.1    KA646283    AFP60912.1    Y11216    Y11820    AE014134    ACPB03011086    ACPB03011087    ACPB03011088    ACPB03011089    CH954177    EDV58513.2    KQ435955    KOX68063.1    CM002910    KMY89494.1    LJIG01015993    KRT81936.1    MNPL01010499    OQR73093.1    GBXI01005794    JAD08498.1    HACA01008823    CDW26184.1    CH933811    EDW06523.1    GDHF01000602    JAI51712.1    GEFM01004725    JAP71071.1    GDHF01027931    GDHF01011161    JAI24383.1    JAI41153.1    CH479180    EDW28391.1    CM000157    EDW88798.1    KB630631    KB632280    ENN75935.1    ERL83742.1    ERL91300.1    KZ288347    PBC27555.1    GAKP01007474    GAKP01007473    JAC51479.1    CAEY01000699    KQ434870    KZC09476.1    CAEY01000697    CP012526    ALC47646.1    GAMC01001426    JAC05130.1    GADI01000824    JAA72984.1    GDRN01040355    JAI67159.1    GGLE01004530    MBY08656.1    GFXV01000371    MBW12176.1    OUUW01000006    SPP81630.1    GFWV01021197    MAA45925.1   
Pfam
PF01536   SAM_decarbox
Interpro
IPR001985   S-AdoMet_decarboxylase        + More
IPR016067   S-AdoMet_deCO2ase_core       
IPR018166   S-AdoMet_deCO2ase_CS       
IPR006709   SSU_processome_Utp14       
SUPFAM
SSF56276   SSF56276       
PDB
1JEN     E-value=8.65576e-57,     Score=556

Ontologies

Topology

Length:
310
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.11128
Exp number, first 60 AAs:
0.10444
Total prob of N-in:
0.04970
outside
1  -  310
 
 

Population Genetic Test Statistics

Pi
227.523773
Theta
147.31258
Tajima's D
1.650903
CLR
0.636109
CSRT
0.812509374531273
Interpretation
Uncertain
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