Gene

KWMTBOMO01082

Pre Gene Modal

BGIBMGA007347

Annotation

olfactory_receptor_39_[Bombyx_mori]

Location

Bomo_Chr3(-):1727742-1729805      View in EpiBrowser

Full name

Odorant receptor      

Location in the cell

PlasmaMembrane   Reliability : 4.382

CDS

ATGCAGTCCGTTAAGAAGCGCGGCGTAATTTTCTGGCTAGTGATAATTAGTAATGGAGTTGTCTACCTCGTGAAGCCAATCGTGACGCCCGGCAGGCATTTCATGGAAGACCAATTCATCATTTTAGGTCTCGAACCTAAGTACGAAACACCGAATTACGAGATAGGATTTTTTATGATGGCGGTCGGAGTTTGTGTGACTTGCTACTTGCCAGCCAACATCACGGCTTACCTGATAACCGTAGCCGGATATTCAGAAGCACAGTTTTTGGCACTTGGACACGAACTCGCAAACCTGTGGCCGGACGCTCAACTACACTGCCGCGCAATGAACTTGAGCCAATCAGTAAATGAGCAAGCTAACGAATACGTGAAAATGCGATTGAGAGAATTAGTAAAAATACATTCCACCAATGTTAACCTTTTGAGGGATATAGAGGGAGCTTTTAGAGGAGCTATTGCTGTTGAATTTTTACTATTGATTGTGGGCCTTATAGCTGAGTTGCTGGGGGGCTTGGAGAATACATACATGCAGGTGCCTTTTGCGCTGATTCAGGTCTCGGTGGACTGCCTCACGGGACAGCGGGTGATGGATGCGAACTTGGCTCTAGAACGCGCAGTTTACGATTGTCGGTGGGAAGAGTTCGATGCTAGTAACCGTCGGGTCGTGTTGCTACTGTTGCAGAACGCACAGAAAGTAGCCACGCTGTCGGCGGGCGGCATCGCCACCCTCAACTTCAGCTGTCTCATGGCTGTGATCAAATCTATCTACTCTGCCTACACCACGCTTAGAACTACCATGAAATAA

Protein

MQSVKKRGVIFWLVIISNGVVYLVKPIVTPGRHFMEDQFIILGLEPKYETPNYEIGFFMMAVGVCVTCYLPANITAYLITVAGYSEAQFLALGHELANLWPDAQLHCRAMNLSQSVNEQANEYVKMRLRELVKIHSTNVNLLRDIEGAFRGAIAVEFLLLIVGLIAELLGGLENTYMQVPFALIQVSVDCLTGQRVMDANLALERAVYDCRWEEFDASNRRVVLLLLQNAQKVATLSAGGIATLNFSCLMAVIKSIYSAYTTLRTTMK

Similarity

Belongs to the insect chemoreceptor superfamily. Heteromeric odorant receptor channel (TC 1.A.69) family.

Uniprot

B1B1Q7   H9JCV0   A0A0L7LGZ8   A0A0E4B595   A0A1Y9TJT9   A0A0E4B599   + More
B1B1Q1   A7E3H6   A0A2H1WCF2   A0A3G6V6V3   H9JCZ2   C4B7W9   I3Y3H8   A0A345BEW0   A7E3H9   A0A2W1BR24   A0A076E626   A0A076E5Z5   A0A0V0J1D8   A0A1V1WC68   A0A2A4J488   A0A2L1TG79   A0A2W1BGJ8   A0A0S1TPK5   A0A1S5XXM9   A0A2L1TG85   A0A1V1WC56   A0A1S5XXN2   A0A2K8GL41   A0A1B3B749   A0A0K8TVD3   A0A146JVP7   A0A1S5XXN8   A0A3G6V712   A0A2H1WDS1   A0A0L7K4E6   A0A1Y9TJJ5   A0A146JWS3   A0A2A4J308   A0A075T2Z3   A0A0B5CSS9   A0A2W1BIS7   A0A0B5GQ12   A0A2L1TG44   A0A1X9P7J6   A0A097ITU7   A0A097IYM0   A0A146JYU4   A0A0K8TU65   A0A0B5A1T0   A0A2A4JBA0   A0A097IYN8   A0A0B5GR64   A0A0B5CUS1   A0A097ITT9   A0A2H1WC45   A0A076E9A9   A0A2K8GKT9   A0A076E995   A0A2A4JAT4   H9A5Q5   A0A2H1WC18   A0A345BEX0   A7E3H8   C4B7W8   A0A0S1TRB2   A0A1B3B753   A0A2W1BH90   A0A1S5XXN3   A0A2L1TG55   A0A2A4JA14   A0A1B3P5T0   H9A5Q6   A0A223HDE2   A2T872   A0A345BEX3   A0A2K8GKS3   A0A223HD72   A0A1S5XXN5   A0A223HD20   A0A1B2G2M2   A0A223HD73   A0A212FKR6   A0A0E4B423   A0A212ERN2   A0A386H9N9   A0A212FC05   A0A212FC10   H9J5G9   I3Y3H7   A0A212FC17   A0A0U2RFI8   A0A345BEV9  

Pubmed

19427209    19121390    26227816    17257213    30465940    22646846    + More
29727827    28756777    24998398    27006164    26812239    23950722    29375398    26017144    25027790    25252791    28736530    22363688    27538507    28150741    22118469    26657286   

EMBL

AB186516    AB472118    BAG12815.1    BAH66336.1    BABH01027717    BABH01027718    + More
BABH01027719    BABH01027720    BABH01027721    JTDY01001167    KOB74670.1    LC002703    BAR43451.1    KX084505    ARO76460.1    LC002710    BAR43458.1    AB186510    AB472114    BAG12809.1    BAH66332.1    BK005941    DAA05991.1    ODYU01007660    SOQ50636.1    MH193989    AZB49435.1    BABH01027593    AB472117    BAH66335.1    JQ794808    AFL70813.1    MG816599    AXF48784.1    BK005944    DAA05994.1    KZ150062    PZC74193.1    KF487708    AII01106.1    KF487678    AII01076.1    GDKB01000050    JAP38446.1    GENK01000073    JAV45840.1    NWSH01003458    PCG66260.1    KY707234    AVF19676.1    PZC74192.1    KR935736    ALM26228.1    KY399281    AQQ73512.1    KY707208    AVF19650.1    GENK01000057    JAV45856.1    KY399282    AQQ73513.1    KY225496    ARO70508.1    KT588132    AOE48042.1    GCVX01000195    JAI18035.1    GEDO01000034    JAP88592.1    KY399283    AQQ73514.1    MH193983    AZB49429.1    SOQ50634.1    JTDY01012011    KOB52347.1    KX084500    ARO76455.1    GEDO01000058    JAP88568.1    PCG66259.1    KF768704    AIG51898.1    KM678313    AJE25886.1    PZC74191.1    KM892387    AJF23802.1    KY707206    AVF19648.1    KX084467    ARO76422.1    KM597213    AIT69890.1    KM655550    AIT72000.1    GEDO01000057    JAP88569.1    GCVX01000196    JAI18034.1    KJ542684    AJD81568.1    NWSH01002174    PCG68968.1    KM655551    AIT72001.1    KM892388    AJF23803.1    KM678314    AJE25887.1    KM597214    AIT69891.1    SOQ50633.1    KF487680    AII01078.1    KX585338    ARO70231.1    KF487666    AII01064.1    PCG68969.1    JN836705    AFC91745.2    SOQ50635.1    MG816609    AXF48794.1    BK005943    DAA05993.1    AB472116    BAH66334.1    KR935735    ALM26227.1    KT588137    AOE48047.1    PZC74198.1    KY399285    AQQ73516.1    KY707207    AVF19649.1    PCG68967.1    KX655993    AOG12942.1    JN836706    AFC91746.1    KY283740    AST36399.1    DQ991156    ABK27850.1    MG816612    AXF48797.1    KX585345    ARO70238.1    KY283662    AST36321.1    KY399284    AQQ73515.1    KY283620    AST36279.1    KU598896    ANZ03142.1    KY283663    AST36322.1    AGBW02008001    OWR54326.1    LC002711    BAR43459.1    AGBW02012963    OWR44153.1    MG546606    AYD42229.1    AGBW02009241    OWR51276.1    OWR51272.1    BABH01028070    BABH01028071    BABH01028072    BABH01028073    JQ794807    AFL70812.1    OWR51275.1    KP975144    ALT31663.1    MG816598    AXF48783.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000007151   

PRIDE

B1B1Q7    H9JCV0    B1B1Q1    A7E3H6    H9JCZ2    C4B7W9    + More
A7E3H9    A7E3H8    C4B7W8    A2T872    H9J5G9   

Pfam

PF02949   7tm_6

Interpro

IPR004117   7tm6_olfct_rcpt       

ProteinModelPortal

B1B1Q7   H9JCV0   A0A0L7LGZ8   A0A0E4B595   A0A1Y9TJT9   A0A0E4B599   + More
B1B1Q1   A7E3H6   A0A2H1WCF2   A0A3G6V6V3   H9JCZ2   C4B7W9   I3Y3H8   A0A345BEW0   A7E3H9   A0A2W1BR24   A0A076E626   A0A076E5Z5   A0A0V0J1D8   A0A1V1WC68   A0A2A4J488   A0A2L1TG79   A0A2W1BGJ8   A0A0S1TPK5   A0A1S5XXM9   A0A2L1TG85   A0A1V1WC56   A0A1S5XXN2   A0A2K8GL41   A0A1B3B749   A0A0K8TVD3   A0A146JVP7   A0A1S5XXN8   A0A3G6V712   A0A2H1WDS1   A0A0L7K4E6   A0A1Y9TJJ5   A0A146JWS3   A0A2A4J308   A0A075T2Z3   A0A0B5CSS9   A0A2W1BIS7   A0A0B5GQ12   A0A2L1TG44   A0A1X9P7J6   A0A097ITU7   A0A097IYM0   A0A146JYU4   A0A0K8TU65   A0A0B5A1T0   A0A2A4JBA0   A0A097IYN8   A0A0B5GR64   A0A0B5CUS1   A0A097ITT9   A0A2H1WC45   A0A076E9A9   A0A2K8GKT9   A0A076E995   A0A2A4JAT4   H9A5Q5   A0A2H1WC18   A0A345BEX0   A7E3H8   C4B7W8   A0A0S1TRB2   A0A1B3B753   A0A2W1BH90   A0A1S5XXN3   A0A2L1TG55   A0A2A4JA14   A0A1B3P5T0   H9A5Q6   A0A223HDE2   A2T872   A0A345BEX3   A0A2K8GKS3   A0A223HD72   A0A1S5XXN5   A0A223HD20   A0A1B2G2M2   A0A223HD73   A0A212FKR6   A0A0E4B423   A0A212ERN2   A0A386H9N9   A0A212FC05   A0A212FC10   H9J5G9   I3Y3H7   A0A212FC17   A0A0U2RFI8   A0A345BEV9  

PDB

6C70     E-value=0.00610157,     Score=91

KEGG

100127046    K22984 odorant receptor | (RefSeq) Or-39, BmOR-14, BmOr-39, Or39; olfactory receptor 39

GO

GO:0016021   GO:0007165   GO:0004984   GO:0005549   GO:0005886   GO:0007608   GO:0016020   GO:0000786   GO:0003677   GO:0005634   GO:0006334   GO:0003779  

PANTHER

PTHR21137  

Subcellular location

Cell membrane  

Length:

268

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

88.4253

Exp number, first 60 AAs:

26.26359

Total prob of N-in:

0.99829

POSSIBLE N-term signal

sequence

inside

1  -  6

TMhelix

7  -  29

outside

30  -  56

TMhelix

57  -  79

inside

80  -  146

TMhelix

147  -  169

outside

170  -  235

TMhelix

236  -  258

inside

259  -  268

 

 

Pi

206.699383

Theta

147.712681

Tajima's D

-0.585312

CLR

0.244949

CSRT

0.219789010549473

Interpretation

Uncertain