Gene

KWMTBOMO01073  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007350

Annotation

PREDICTED:_vesicle_transport_through_interaction_with_t-SNAREs_homolog_1A_[Bombyx_mori]

Location

Bomo_Chr3(-):1653716-1657085      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.612 Nuclear   Reliability : 1.19

CDS

ATGGCCACATTAGTGCAATCTTATGAGCAGCAATATTCGGTGCTTACTGCCGACATCACCGCAAAAATAGGACGATTAAAAAATGGCACTGCAGAAAACCGAGAACAATTATCAAGAGAAATACAGTCAAACTTTGAAGAGGCAAATGATTTGTTGGAACAGTTGGAGTTGGAAGCACGAGGTCCCCGTGTAGCTGCTTACCGTGCTGAACTGCAGCGAGTCAAACAACAGTTCAAAACTACACTCGGAACCAATGGACATTTAGTGGGTGAGGTGTCGGAGAGCGAGGACTGGGGTGCGGGCGATGAGCGCCGACAGTTGCTCGACAACTCAGAGCGCCTTGAACGCGGAGGCCGAGTTTTGTCTGAAGGATATAGAGTCCTACTCGAGACTGAACAGGTGGGAGCAGCTGTGCTGCAGGATCTCAGCGTACAGCGGGAGACCATACAGCGGTCGCGCGCTCGGCTGCGCGAGACCGACGAGGAGCTGGATCGGTCGTGGCGGGTGGCGGCGGGCATGTCGGCGCGCGCGCTGCGGCACCGCGCGCTGCTGCTGGCGGCGCTGGGCGCGCTGGCGCTGCTCACGGGGCTGGCGCTCTACCTGGCGCTGTCCTGA

Protein

MATLVQSYEQQYSVLTADITAKIGRLKNGTAENREQLSREIQSNFEEANDLLEQLELEARGPRVAAYRAELQRVKQQFKTTLGTNGHLVGEVSESEDWGAGDERRQLLDNSERLERGGRVLSEGYRVLLETEQVGAAVLQDLSVQRETIQRSRARLRETDEELDRSWRVAAGMSARALRHRALLLAALGALALLTGLALYLALS

Uniprot

H9JCV3   A0A2H1WYR5   A0A2A4IV57   A0A194QAJ6   A0A2W1BKP3   A0A0L7L6L3   + More
A0A2P8YVS4   A0A195CS93   E2AHH8   F4WFN9   A0A195FTA6   A0A195BMH5   A0A151WI70   A0A151J0S5   A0A154PS69   A0A026WLW4   A0A067RW17   A0A0N0BGG5   E9JDA9   A0A2A3E722   U5EVQ1   A0A088AEL5   A0A158NZ28   A0A1B6KD15   A0A0T6B8I9   G3MFP1   V5GLN7   B0WIR4   D6WX27   A0A224ZB35   A0A1B6CML2   A0A1E1X647   G3MLH9   J9HZ85   A0A1W4WCP8   L7LYV7   A0A131X8A7   A0A1B0CT51   A0A1Q3F555   J3JW19   N6UGU0   A0A1L8DVM3   E0VGP5   A0A0K8TT03   A0A1Q3F350   A0A182G5P1   A0A2M4AU90   T1I8I6   A0A023F019   A0A0C9R103   A0A1Y1MTU4   T1DH11   A0A2M4BZB9   W5JFP3   A0A1S3HIM2   A0A1B6IZ89   A0A0L7QMZ8   A0A3L8DY47   A0A182UE90   A0A240PP07   A0A182YNG3   A0A2M3ZJR0   A0A1C7CZQ0   Q7QGG0   A0A2T7PYW9   A0A182K1S2   A0A182F5M2   A0A182P9H9   C3Z5P8   A0A293M453   A0A182NER5   E2B8X4   A0A210QX71   A0A182QRB1   A7SUK0   A0A023GGA9   A0A0A9WWB9   A0A0K8T6F6   A0A0K8RHS5   B7P4P6   A0A182HGC4   A0A131XNF7   A0A182V0S2   R7V1F2   A0A1W2W6P4   B4LGK2   A0A0P5F9Q6   A0A0P5S2D5   A0A0N8BWQ1   A0A3B3R9B5   A0A0K0FCP2   B4HVI9   A0A0N5CGD5   A0A1D5NYL6   V5IET9   E1BYU6   A0A061QFV2   B4QLE4   A0A0P5AS05  

Pubmed

19121390    26354079    28756777    26227816    29403074    20798317    + More
21719571    24508170    24845553    21282665    21347285    22216098    18362917    19820115    28797301    28503490    17510324    25576852    28049606    22516182    23537049    20566863    26369729    26483478    25474469    26131772    28004739    20920257    23761445    30249741    25244985    20966253    12364791    14747013    17210077    18563158    28812685    17615350    25401762    26823975    23254933    17994087    29240929    25765539    22936249   

EMBL

BABH01027707    ODYU01012102    SOQ58220.1    NWSH01006514    PCG63386.1    KQ459232    + More
KPJ02497.1    KZ150062    PZC74204.1    JTDY01002675    KOB70964.1    PYGN01000333    PSN48346.1    KQ977329    KYN03515.1    GL439543    EFN67106.1    GL888120    EGI67016.1    KQ981276    KYN43537.1    KQ976444    KYM86231.1    KQ983089    KYQ47542.1    KQ980591    KYN15209.1    KQ435124    KZC14765.1    KK107161    EZA56616.1    KK852428    KDR24064.1    KQ435782    KOX74768.1    GL771866    EFZ09227.1    KZ288358    PBC27082.1    GANO01001776    JAB58095.1    ADTU01004533    GEBQ01030637    JAT09340.1    LJIG01009144    KRT83667.1    JO840692    AEO32309.1    GALX01005954    JAB62512.1    DS231951    EDS28641.1    KQ971361    EFA08782.2    GFPF01013297    MAA24443.1    GEDC01022589    JAS14709.1    GFAC01004439    JAT94749.1    JO842730    AEO34347.1    CH477575    EJY57800.1    GACK01007773    JAA57261.1    GEFH01004877    JAP63704.1    AJWK01027095    GFDL01012359    JAV22686.1    BT127437    AEE62399.1    APGK01035587    KB740928    KB632064    ENN77867.1    ERL88487.1    GFDF01003621    JAV10463.1    DS235150    EEB12551.1    GDAI01000330    JAI17273.1    GFDL01013061    JAV21984.1    JXUM01146432    KQ570172    KXJ68432.1    GGFK01011029    MBW44350.1    ACPB03002742    GBBI01003872    JAC14840.1    GBZX01002155    JAG90585.1    GEZM01021491    JAV88979.1    GAMD01002556    JAA99034.1    GGFJ01009275    MBW58416.1    ADMH02001356    GGFL01004480    ETN62886.1    MBW68658.1    GECU01015487    JAS92219.1    KQ414864    KOC60000.1    QOIP01000003    RLU24869.1    GGFM01008066    MBW28817.1    AAAB01008835    EAA05799.2    PZQS01000001    PVD38626.1    GG666583    EEN52161.1    GFWV01009036    MAA33765.1    GL446390    EFN87873.1    NEDP02001389    OWF53325.1    AXCN02000844    DS469814    EDO32619.1    GBBM01002489    JAC32929.1    GBHO01034489    GDHC01017987    JAG09115.1    JAQ00642.1    GBRD01004709    GDHC01014984    JAG61112.1    JAQ03645.1    GADI01003739    JAA70069.1    ABJB010276328    ABJB010281412    ABJB010341993    ABJB010617370    DS636786    EEC01568.1    APCN01004213    GEFM01006812    JAP68984.1    AMQN01000950    KB297742    ELU10032.1    CH940647    EDW69440.1    GDIP01150112    GDIQ01031431    LRGB01002536    JAJ73290.1    JAN63306.1    KZS07224.1    GDIQ01110654    JAL41072.1    GDIQ01137451    JAL14275.1    CH480817    EDW49954.1    GANP01009607    JAB74861.1    GBFC01000086    JAC59252.1    CM000363    CM002912    EDX08717.1    KMY96709.1    GDIP01209303    JAJ14099.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000037510    UP000245037    UP000078542    + More
UP000000311    UP000007755    UP000078541    UP000078540    UP000075809    UP000078492    UP000076502    UP000053097    UP000027135    UP000053105    UP000242457    UP000005203    UP000005205    UP000002320    UP000007266    UP000008820    UP000192223    UP000092461    UP000019118    UP000030742    UP000009046    UP000069940    UP000249989    UP000015103    UP000000673    UP000085678    UP000053825    UP000279307    UP000075902    UP000075880    UP000076408    UP000075882    UP000007062    UP000245119    UP000075881    UP000069272    UP000075885    UP000001554    UP000075884    UP000008237    UP000242188    UP000075886    UP000001593    UP000001555    UP000075840    UP000075903    UP000014760    UP000008792    UP000076858    UP000261540    UP000035680    UP000001292    UP000046392    UP000000304   

PRIDE

H9JCV3    G3MFP1    G3MLH9   

Pfam

PF05008   V-SNARE        + More
PF01145   Band_7
PF09734   Tau95

Interpro

IPR007705   Vesicle_trsprt_v-SNARE_N        + More
IPR010989   SNARE       
IPR038407   v-SNARE_N_sf       
IPR000727   T_SNARE_dom       
IPR027027   GOSR2/Membrin/Bos1       
IPR001107   Band_7       
IPR000163   Prohibitin       
IPR036013   Band_7/SPFH_dom_sf       
IPR019136   TF_IIIC_su-5_HTH       

SUPFAM

SSF47661   SSF47661        + More
SSF117892   SSF117892       

Gene 3D

1.20.58.400    

CDD

cd03401  SPFH_prohibitin

ProteinModelPortal

H9JCV3   A0A2H1WYR5   A0A2A4IV57   A0A194QAJ6   A0A2W1BKP3   A0A0L7L6L3   + More
A0A2P8YVS4   A0A195CS93   E2AHH8   F4WFN9   A0A195FTA6   A0A195BMH5   A0A151WI70   A0A151J0S5   A0A154PS69   A0A026WLW4   A0A067RW17   A0A0N0BGG5   E9JDA9   A0A2A3E722   U5EVQ1   A0A088AEL5   A0A158NZ28   A0A1B6KD15   A0A0T6B8I9   G3MFP1   V5GLN7   B0WIR4   D6WX27   A0A224ZB35   A0A1B6CML2   A0A1E1X647   G3MLH9   J9HZ85   A0A1W4WCP8   L7LYV7   A0A131X8A7   A0A1B0CT51   A0A1Q3F555   J3JW19   N6UGU0   A0A1L8DVM3   E0VGP5   A0A0K8TT03   A0A1Q3F350   A0A182G5P1   A0A2M4AU90   T1I8I6   A0A023F019   A0A0C9R103   A0A1Y1MTU4   T1DH11   A0A2M4BZB9   W5JFP3   A0A1S3HIM2   A0A1B6IZ89   A0A0L7QMZ8   A0A3L8DY47   A0A182UE90   A0A240PP07   A0A182YNG3   A0A2M3ZJR0   A0A1C7CZQ0   Q7QGG0   A0A2T7PYW9   A0A182K1S2   A0A182F5M2   A0A182P9H9   C3Z5P8   A0A293M453   A0A182NER5   E2B8X4   A0A210QX71   A0A182QRB1   A7SUK0   A0A023GGA9   A0A0A9WWB9   A0A0K8T6F6   A0A0K8RHS5   B7P4P6   A0A182HGC4   A0A131XNF7   A0A182V0S2   R7V1F2   A0A1W2W6P4   B4LGK2   A0A0P5F9Q6   A0A0P5S2D5   A0A0N8BWQ1   A0A3B3R9B5   A0A0K0FCP2   B4HVI9   A0A0N5CGD5   A0A1D5NYL6   V5IET9   E1BYU6   A0A061QFV2   B4QLE4   A0A0P5AS05  

PDB

2NPS     E-value=2.05578e-09,     Score=145

KEGG

101735547    K08493 vesicle transport through interaction with t-SNAREs 1 | (RefSeq) vesicle transport through in

PATHWAY

04130    SNARE interactions in vesicular transport - Bombyx mori (domestic silkworm)

GO

GO:0006886   GO:0005623   GO:0016021   GO:0016192   GO:0016020   GO:0005484   GO:0005794   GO:0006896   GO:0031201   GO:0031902   GO:0006623   GO:0006891   GO:0006888   GO:0005789   GO:0012507   GO:0000149   GO:0042147   GO:0005829   GO:0048280   GO:0008565   GO:0051015   GO:0003779  

PANTHER

PTHR23222  

Length:

204

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

21.33537

Exp number, first 60 AAs:

0.00067

Total prob of N-in:

0.85413

inside

1  -  180

TMhelix

181  -  203

outside

204  -  204

 

 

Pi

213.044629

Theta

163.777374

Tajima's D

0.839502

CLR

0

CSRT

0.611269436528174

Interpretation

Uncertain