Silkworm Genome Informatics Database

Gene

KWMTBOMO01056

Pre Gene Modal

BGIBMGA007407

Annotation

hypothetical_protein_KGM_07711_[Danaus_plexippus]

Location

Bomo_Chr3(+):1298526-1313706 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.743

CDS

ATGTCACAACATGGATGCCCTGAGAGACTTTCGAGTAGATCGAAGGGATTCCAGGAAGAAGGTGGTCAGGCCACGATGGAGGTGCTGGTGGAGACGCTCACGGGTACTGCTTTTGAAATGACCGTGTCACCATCGGACACCGTGTTCGCGATAAAGTCGAAGATATTTAGAGTAGAAGGTATTCCCGTATCACAACAGCACCTAGTCTACAATCTAAAGGAGTTGGAGAACTGGTCGTCACTCGGCGAGCACGCCATCGGGGCCGGAGCGAGATTGCGCCTCGTGCTGGGCATGAGGGGAGGCCCCGTCGCGACCAGGAGACTGCCCCCTCCGGAACCATGGAGGGACATTGAGAGAATGCTCGATACTGACAGAGACGAAGGGGCAAGTTCAAGTCGCGAAGGTGGCTGTAAGATGACGGTGCTGGTGTTCCGAGACGGTGAGCGCGTGAGCATGCTCAGCGTCAGAGAGAACCGCGACGGAACGTATTCGCCGCTGGACCACAACAAGTGTCCACGAGTGAGCGAGGTCAGTCACCTGCCGGATAAGGAGTACAGTTTAGTGGAGGGTCCTTGTCGGGGGGCGCTGCACGACAACGCGGTGACGATGGGCAAGATGATGGATCTGCGGCGCAGGATGGAGACCCTCACGCTGACGCGGCCGCAGCTAGCGGCCAGGAACGATAAAGCGGACATACAAAAGACTCGAAGCGAAGAGACGCTGTCCCGTCAGTACGAGACGCAGCCGGACACGTTCACGCCGACCTACGACGGAGCCTACACTGGATACGAATACGAACCTAATTTCCCCGAAAGAGGCGTGCTGGGCGCGTGGCTGTCGTCGTCCACGTCGCGGCTGGAGACGCTGGGCGCGCTGCCGGCGCTGAGCCGCCACGCCAACCGCGAGCACCTGCACCTCAGCGACGACCTGCTGCACCGCCCGCCGCCCGACAAGAAGCCGCCCCGCCTGCGCTGCGCCTTCTGCAAGAAGCGCCTCAGCATCGCCACCGTGCACAAGTGCCGCTGCGGGGCCAGCTTCTGCGCGCCGCACAGATACGCAGAGGTCCACGGCTGCGCTTACGACTACAAGGCGCGGCCCCACCCCGGCCTCGGCACCGCGCTGCTCGCGCCCAAGCTGCCCAAGATATAG

Protein

MSQHGCPERLSSRSKGFQEEGGQATMEVLVETLTGTAFEMTVSPSDTVFAIKSKIFRVEGIPVSQQHLVYNLKELENWSSLGEHAIGAGARLRLVLGMRGGPVATRRLPPPEPWRDIERMLDTDRDEGASSSREGGCKMTVLVFRDGERVSMLSVRENRDGTYSPLDHNKCPRVSEVSHLPDKEYSLVEGPCRGALHDNAVTMGKMMDLRRRMETLTLTRPQLAARNDKADIQKTRSEETLSRQYETQPDTFTPTYDGAYTGYEYEPNFPERGVLGAWLSSSTSRLETLGALPALSRHANREHLHLSDDLLHRPPPDKKPPRLRCAFCKKRLSIATVHKCRCGASFCAPHRYAEVHGCAYDYKARPHPGLGTALLAPKLPKI

Uniprot

A0A2W1BFE3 A0A2H1WM15 A0A212EUW7 A0A194QBW8 A0A3M6UVG2

Pubmed

28756777 22118469 26354079 30382153

EMBL

KZ150083 PZC73829.1 ODYU01009588 SOQ54123.1 AGBW02012284 OWR45285.1 + More
KQ459232 KPJ02485.1 RCHS01000681 RMX57308.1

Proteomes

UP000007151 UP000053268 UP000275408

Pfam

PF01428 zf-AN1 + More
PF00240 ubiquitin

Interpro

IPR000058   Znf_AN1        + More
IPR029071   Ubiquitin-like_domsf
IPR019956   Ubiquitin
IPR035896   AN1-like_Znf
IPR000626   Ubiquitin_dom

SUPFAM

SSF118310 SSF118310 + More
SSF54236 SSF54236

Gene 3D

4.10.1110.10

ProteinModelPortal

A0A2W1BFE3 A0A2H1WM15 A0A212EUW7 A0A194QBW8 A0A3M6UVG2

PDB

6A42 E-value=7.17644e-12, Score=170

KEGG

101740771 K12163 AN1-type zinc finger and ubiquitin domain-containing protein 1 | (RefSeq) AN1-type zinc finge

GO

GO:0008270 GO:0046872 GO:0005515 GO:0005840 GO:0006412 GO:0051539 GO:0009451 GO:0007155 GO:0051015 GO:0003779 GO:0016021

Length:

382

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00151

Exp number, first 60 AAs:

0.00114

Total prob of N-in:

0.00677

outside

1 - 382

Pi

20.280237

Theta

17.987249

Tajima's D

-0.782748

CLR

5.046909

CSRT

0.186440677966102

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics