SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01052
Pre Gene Modal
BGIBMGA007404
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101747202_[Bombyx_mori]
Location
Bomo_Chr3(+):1271746-1278390      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 4.513
 

Sequence

CDS
ATGTCCCTCGAGAATGGCTGCACAGCATTACAGCGCGCCGCAGCTGACGGACACGTCGAAGTCGTCACACTGCTCCTCCAGCACGGAGCTGATCCGAACAAACAAGATCACTTGCACGGCAATACAGCAGCGCACGAGGCCGCGTGGAAGGGTTACTCCAGGTGTGTGGGGCTGCTGGCGCGGGCCGGAGCCGATCTCCTCGCTAGGAACTCGGCCGGCTTCGTGCCGCTGCATCTTGCCTGTCAGAACGGACACAACCAGTCCTGCAGAGAGATTTTGCTCGCTGGCGCGCCGCCGGACTTACAGAATAATTATGGCGATACATCGTTACACACAGCGGCGCGATACGGCCATGCCGGCGTCACTCGCATCCTCATCTCAGCGCAATGCCGCGTCTCCGAGCAAAACAAGAACGGCGACACGGCTCTCCACATCGCTGCAGCCATGGGAAGAAGGAAATTAACACGCATACTCCTGGAAGCAGGCTGCGACAAATCCATCAGGAACCACCAAGGGGAAACAGCAAGAGATATCGCAACCAGGAAAGGACTCGAAGAGATCATCCAAATACTGAACACTCCTGTCGCTAAACAACAAAAGAAAAAACGAGACAAAAGCAAAGAGAGAACTTTAGATGAACCTGACGACGGAAAGAAGAAAGATAAAGTTAAAGACAAGAAAAAGAAGAACCCTAGGTTGAGCTCGCTACCCACCGAACCATTAAGAAAAGGCGAACAGTACTTCCTAGACTTAGCTGGAAACATAAAAAAGGGCCCAATAGGTGCAGGCTACACGTGCTATTGTGCTCCATTCTTCAAGCATATGGAGGACAAACTGAACGAAGATAAGAAAGACTTAAAGAAACATATAGACAGAGCTCATGAACGATTAGATCAGAAAGTTACCGATCTAGAAATGAAGACTCAAGGACAAATATCTGAACTAACTAGATTCGTGGCAGCAGAAAGGGCGTTGTGTAAAGAACGGCACATACACCTGGAACAGTGGCTTACACGTGGGATGATGTTCAGGGCTTCGGAGCGCGCGAGAAAACCAGACTTTAGTCCTAGATGCTCAATAGACATACCTCCACTGAAAAGAACGAGAAGTCTTGAGTTCTTAGACACTGAAGAACGTACTAGGGTAAATCAAATTGTCAGGAATTTCAATAAAAATGCTGAACATTATGAGAGCGATCCTAAAGACTTAAACGACAGTAAAACGACGTCTAAAAGCACTGAGGGTCTGGATAGCAAAAGCTCACAAAGTCCAAGGCGAAGGCATTTCCTGAAGAATTCCAAGAGTACCGACCATTTAGACGCAGGTCCCAGTCGACTATCGCGACCTCCTCTACCGTTTCATGTACCTCAAGACCCAAACCGCTTACATAACGTTACAGCAGAGATTCATATTAAAGATAATAAAGTGTCCGTGTCCAAATCACCTTCACCGATGACGGTTCAAACGAAACCTACATATAATCAAAGATATGTATCTCCTAGTCGTCTGTCAGATCCTAAGTCACACGTTGCTACCGACCCTGAAGATAGGATACAGCCAGAACCAAATGTATCATGGAAGAGCCAGGTATTGCAAAGAACGGCTGATGACATTCGAAAAAGAGTAGACCTAGAGAAAGAGGTGTCTGGGGTCGCAACTCGAAACCCCAAGGCGTTAGATATTTCTCAAGACGGTTACGTTAAGCTACGAAAACAAAACTACCACGCTAACGAAGGACCCAGGAAATCAGTGCAGGAATTAGTAGCGCAAGTTGAACAGCAGAAAGGAATTGCTCACGAGCAAATGTTAAGAAAACCACCGATTGATAGTCCAGACTTCATAGTACAGCCTAGTCCTAGTGGCATTTTGAAAATGCCCCAACAACCTCAGCGACCCGCTCCAGTATTGAAAGAAAAGCCACCGAAGACCAAACGTTTTAGTTTGCACAACTTAATTCCATTCCCAACGAGAAAATCCTTCCAAAGCCCACCTCAAGAAAATGGGAACAATTCTGAAAGCAGCGACGAAGAGGACAATCCGATACGTAGTTCAGTTCAGCCTGGTCCTATGAGAAATACTAACTTACTACAAACACTTCCCATGCCAAACTACGAGACTATGTCTGGAAAGTCACAATCACCGGCACCAACACAACCTCCCACTTACGACTTACGTACAATGATACCGAAAGATGCATATTTCCACGAAATACCGAATCGACAACCTTACTTGGACAATGGTCACTACACTCAAACGCCATACGACTTTAACCAATCAGGTTTGCCCAACGCGGTCCAAGCTCGAAGCAGGAACCCGCTATACCACAACAACACCGGTGTGTTCGATGCCATGATGCAAGACCATATCTACAGGGAAATGGAACGCATTCCACATTGTTACAGCCAACATTTGGACCAGAACACCGAAGTTGAGATCGCTAATCAGAACGATCTTCGTTATTACGACAATCGTCCAGGAATGTTCCCGAGAAACGTAAGGAAGCCAGCTCCAGACCACAGTTTGTTGCACAGTCGACTGCAATCGTTGGCCATAAACACACATTTGACGGAAACCCAAAGCCAGACCGACCGGGAATCGCACAATGATTCCGGTTACAGTACAAAGGTGTACGGCAGCTCACAAGGCCCTTCTCCGAGTTTATCTGGGCACGTGGACGATAATTTATCTGGTCAACGTGTAAATGTAGGTAGCGGGAAATCTGTCGCACATATGGGTGCATCGAGCTTAGTGTAA
Protein
MSLENGCTALQRAAADGHVEVVTLLLQHGADPNKQDHLHGNTAAHEAAWKGYSRCVGLLARAGADLLARNSAGFVPLHLACQNGHNQSCREILLAGAPPDLQNNYGDTSLHTAARYGHAGVTRILISAQCRVSEQNKNGDTALHIAAAMGRRKLTRILLEAGCDKSIRNHQGETARDIATRKGLEEIIQILNTPVAKQQKKKRDKSKERTLDEPDDGKKKDKVKDKKKKNPRLSSLPTEPLRKGEQYFLDLAGNIKKGPIGAGYTCYCAPFFKHMEDKLNEDKKDLKKHIDRAHERLDQKVTDLEMKTQGQISELTRFVAAERALCKERHIHLEQWLTRGMMFRASERARKPDFSPRCSIDIPPLKRTRSLEFLDTEERTRVNQIVRNFNKNAEHYESDPKDLNDSKTTSKSTEGLDSKSSQSPRRRHFLKNSKSTDHLDAGPSRLSRPPLPFHVPQDPNRLHNVTAEIHIKDNKVSVSKSPSPMTVQTKPTYNQRYVSPSRLSDPKSHVATDPEDRIQPEPNVSWKSQVLQRTADDIRKRVDLEKEVSGVATRNPKALDISQDGYVKLRKQNYHANEGPRKSVQELVAQVEQQKGIAHEQMLRKPPIDSPDFIVQPSPSGILKMPQQPQRPAPVLKEKPPKTKRFSLHNLIPFPTRKSFQSPPQENGNNSESSDEEDNPIRSSVQPGPMRNTNLLQTLPMPNYETMSGKSQSPAPTQPPTYDLRTMIPKDAYFHEIPNRQPYLDNGHYTQTPYDFNQSGLPNAVQARSRNPLYHNNTGVFDAMMQDHIYREMERIPHCYSQHLDQNTEVEIANQNDLRYYDNRPGMFPRNVRKPAPDHSLLHSRLQSLAINTHLTETQSQTDRESHNDSGYSTKVYGSSQGPSPSLSGHVDDNLSGQRVNVGSGKSVAHMGASSLV

Summary

Uniprot
A0A2A4IYA8   A0A2A4IWY0   A0A2H1VGR2   A0A2W1BHS6   A0A194RAE2   A0A0L7KGD0   + More
A0A212EUZ6  
Pubmed
28756777    26354079    26227816    22118469   
EMBL
NWSH01004652    PCG64815.1    NWSH01005764    PCG63966.1    ODYU01002291    SOQ39582.1    + More
KZ150083    PZC73821.1    KQ460685    KPJ12831.1    JTDY01009984    KOB61964.1    AGBW02012284    OWR45281.1   
Proteomes
UP000218220    UP000053240    UP000037510    UP000007151   
Pfam
PF12796   Ank_2
Interpro
IPR002110   Ankyrin_rpt        + More
IPR020683   Ankyrin_rpt-contain_dom       
IPR036770   Ankyrin_rpt-contain_sf       
SUPFAM
SSF48403   SSF48403       
Gene 3D
1.25.40.20    
CDD
cd00204  ANK
ProteinModelPortal
A0A2A4IYA8   A0A2A4IWY0   A0A2H1VGR2   A0A2W1BHS6   A0A194RAE2   A0A0L7KGD0   + More
A0A212EUZ6  
PDB
6MOL     E-value=3.32664e-22,     Score=263

Ontologies

KEGG
101747202    K21435 ankyrin repeat domain-containing protein 6 | (RefSeq) uncharacterized LOC101747202
GO
GO:0005515   GO:0032481   GO:0006183   GO:0006228   GO:0006241   GO:0005856   GO:0007155   GO:0051015   GO:0003779   GO:0016021  

Topology

Length:
917
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00059
Exp number, first 60 AAs:
0.00031
Total prob of N-in:
0.00003
outside
1  -  917
 
 

Population Genetic Test Statistics

Pi
159.020891
Theta
176.968544
Tajima's D
0.327035
CLR
1.035678
CSRT
0.466826658667067
Interpretation
Uncertain
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