Gene

KWMTBOMO01043

Pre Gene Modal

BGIBMGA007397

Annotation

PREDICTED:_protein_charybde-like_[Papilio_polytes]

Location

Bomo_Chr3(+):847546-848649      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.722

CDS

ATGGAGATCCTGCCGGTCACCAATCAATTTAATGTGGGATTCAACAGCGAAAAAGCGTGGAGCGGGCCGACATGGCGGGAAGCGCCGGCGCCGGTGCCGACGGAAGCGGCGCTGGCCCAGAGGCTCGAGAGAGAACTACGAGCGGCCAAAGGAGCCAGCGAGCTCGCCACCGCGGAGGTCTTAGTGCCGGCGGAGCTGCTCGCGAGGGCGTCGCGGCAGACCCTCGCGCTAGCGGAGGGAGAGCCCTGTGGGTCCCGGGGCGCAGCCGTCATCATCGACGTCGCGGGACGAAGACTAGCAGCCTTCAAAATAGACCCGAATACGTTGACCACGCACGAAATACATCTACACCTTGAACACGACCCCACGAACTGGACGAGTCTGTTGCCGCAATTCTTAAAAAATTTAACGCGAGGCGGCACCATCATCATCAGCCCCCAGTTCACGATAGAGAAGAAGAAATTGTTCAGGAGCCAGGCGGAGTGA

Protein

MEILPVTNQFNVGFNSEKAWSGPTWREAPAPVPTEAALAQRLERELRAAKGASELATAEVLVPAELLARASRQTLALAEGEPCGSRGAAVIIDVAGRRLAAFKIDPNTLTTHEIHLHLEHDPTNWTSLLPQFLKNLTRGGTIIISPQFTIEKKKLFRSQAE

Uniprot

S4PWM8   A0A2W1BMH8   A0A2A4JTF8   A0A2H1VGD8   A0A194R565   A0A194QAH1   + More
A0A212FAY9   A0A0L7LKL3   H9JD00   A0A2P8ZNR6   A0A2J7QHF0   A0A088A6Z5   V9IDE3   E2AY67   A0A310SBM8   A0A067R397   A0A0J7KLU1   A0A1Y1JRU0   A0A2A3E2E8   A0A1B6CKS5   A0A2R7WRS3   A0A0M8ZNK1   A0A195FJK7   A0A158P205   E2BBQ3   A0A0P4VUK8   A0A3L8DSG2   A0A0V0G8C1   A0A0K8TN00   A0A195AVM2   A0A224XRD4   A0A069DNH5   A0A0T6BGG6   A0A0A9XKL4   A0A1B6D1N8   A0A0A9XQZ5   A0A023F4V4   D6WVR1   A0A1B6EUB9   A0A1B6MSH3   A0A0K8SDB0   A0A1W4WLE2   A0A1Y1LPS5   U5ETA3   F4W677   A0A151IKL6   A0A182FBH7   A0A1B6L203   A0A2M4BZV2   A0A2M4BZS4   A0A1B6GMC8   A0A1B0GHK0   A0A2M4BYG6   A0A1B0DC45   A0A2M4A0C6   A0A084WGN3   A0A182Q3I6   A0A2M3YX96   A0A2M3YXD4   A0A1L8DMZ6   W5J274   A0A336M831   N6TMR8   A0A0T6BCT6   A0A2S2Q4L2   A0A336KWL7   A0A182MXP6   A0A1I8MQM3   A0A1I8MQM4   A0A2S2PZ77   A0A1Y1MV34   A0A182H3R4   A0A182VL46   A0A023ELR9   A0A1A9WG84   Q7QGL3   A0A2S2N9E4   A0A1S4H717   A0A182HN67   A0A182Y628   C4WXQ7   T1E2W8   A0A1B0ANK0   A0A1S3CWT8   A0A1Q3FZ39   A0A182WEQ0   A0A1A9UPC7   A0A182RAN9   A0A1A9XCJ4   A0A182XB80   A0A1A9ZBS8   A0A1B0FG47   A0A1I8P860   A0A2H8TDK3   A0A182J3T3   B4MKN8   A0A182MHR4   B4J2V2   A0A0M5IYK9  

Pubmed

23622113    28756777    26354079    22118469    26227816    19121390    + More
29403074    20798317    24845553    28004739    21347285    27129103    30249741    26369729    26334808    25401762    26823975    25474469    18362917    19820115    21719571    24438588    20920257    23761445    23537049    25315136    26483478    24945155    12364791    25244985    24330624    17994087   

EMBL

GAIX01006513    JAA86047.1    KZ150078    PZC73920.1    NWSH01000690    PCG74753.1    + More
ODYU01002417    SOQ39866.1    KQ460685    KPJ12822.1    KQ459232    KPJ02472.1    AGBW02009414    OWR50883.1    JTDY01000723    KOB76093.1    BABH01027638    PYGN01000008    PSN58152.1    NEVH01013976    PNF28012.1    JR038626    JR038627    AEY58349.1    AEY58350.1    GL443762    EFN61602.1    KQ761783    OAD57050.1    KK852785    KDR16565.1    LBMM01005624    KMQ91363.1    GEZM01102330    JAV51912.1    KZ288445    PBC25654.1    GEDC01023272    JAS14026.1    KK855375    PTY22257.1    KQ435989    KOX67707.1    KQ981523    KYN40442.1    ADTU01006923    GL447151    EFN86829.1    GDKW01000214    JAI56381.1    QOIP01000005    RLU22698.1    GECL01001788    JAP04336.1    GDAI01002092    JAI15511.1    KQ976731    KYM76288.1    GFTR01002762    JAW13664.1    GBGD01003266    JAC85623.1    LJIG01000500    KRT86440.1    GBHO01022337    GDHC01009535    JAG21267.1    JAQ09094.1    GEDC01017700    JAS19598.1    GBHO01022336    GBRD01014761    GDHC01021827    JAG21268.1    JAG51065.1    JAP96801.1    GBBI01002693    JAC16019.1    KQ971358    EFA08259.1    GECZ01028217    JAS41552.1    GEBQ01001086    JAT38891.1    GBRD01014762    JAG51064.1    GEZM01055676    JAV72987.1    GANO01002870    JAB57001.1    GL887707    EGI70212.1    KQ977199    KYN05004.1    GEBQ01022302    JAT17675.1    GGFJ01009455    MBW58596.1    GGFJ01009438    MBW58579.1    GECZ01006157    JAS63612.1    AJWK01005253    GGFJ01008986    MBW58127.1    AJVK01005019    GGFK01000880    MBW34201.1    ATLV01023647    KE525345    KFB49377.1    AXCN02001050    GGFM01000148    MBW20899.1    GGFM01000160    MBW20911.1    GFDF01006258    JAV07826.1    ADMH02002136    ETN58357.1    UFQT01000531    SSX25039.1    APGK01058555    APGK01058556    KB741291    ENN70515.1    LJIG01001798    KRT85142.1    GGMS01003474    MBY72677.1    UFQS01000895    UFQT01000895    SSX07533.1    SSX27873.1    GGMS01001481    MBY70684.1    GEZM01023442    JAV88390.1    JXUM01107896    KQ565182    KXJ71246.1    GAPW01003397    JAC10201.1    AAAB01008834    EAA05686.4    GGMR01001235    MBY13854.1    APCN01001866    ABLF02033096    AK342777    BAH72677.1    GALA01000905    JAA93947.1    JXJN01000870    JXJN01000871    JXJN01000872    GFDL01002206    JAV32839.1    CCAG010003863    GFXV01000350    MBW12155.1    CH963847    EDW72744.2    AXCM01008162    CH916366    EDV97122.1    CP012525    ALC43706.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000007151    UP000037510    UP000005204    + More
UP000245037    UP000235965    UP000005203    UP000000311    UP000027135    UP000036403    UP000242457    UP000053105    UP000078541    UP000005205    UP000008237    UP000279307    UP000078540    UP000007266    UP000192223    UP000007755    UP000078542    UP000069272    UP000092461    UP000092462    UP000030765    UP000075886    UP000000673    UP000019118    UP000075884    UP000095301    UP000069940    UP000249989    UP000075903    UP000091820    UP000007062    UP000075840    UP000076408    UP000007819    UP000092460    UP000079169    UP000075920    UP000078200    UP000075900    UP000092443    UP000076407    UP000092445    UP000092444    UP000095300    UP000075880    UP000007798    UP000075883    UP000001070    UP000092553   

PRIDE

H9JD00   

Pfam

PF07809   RTP801_C

Interpro

IPR012918   RTP801-like        + More
IPR038281   RTP801-like_C_sf       

Gene 3D

1.10.490.100    

ProteinModelPortal

S4PWM8   A0A2W1BMH8   A0A2A4JTF8   A0A2H1VGD8   A0A194R565   A0A194QAH1   + More
A0A212FAY9   A0A0L7LKL3   H9JD00   A0A2P8ZNR6   A0A2J7QHF0   A0A088A6Z5   V9IDE3   E2AY67   A0A310SBM8   A0A067R397   A0A0J7KLU1   A0A1Y1JRU0   A0A2A3E2E8   A0A1B6CKS5   A0A2R7WRS3   A0A0M8ZNK1   A0A195FJK7   A0A158P205   E2BBQ3   A0A0P4VUK8   A0A3L8DSG2   A0A0V0G8C1   A0A0K8TN00   A0A195AVM2   A0A224XRD4   A0A069DNH5   A0A0T6BGG6   A0A0A9XKL4   A0A1B6D1N8   A0A0A9XQZ5   A0A023F4V4   D6WVR1   A0A1B6EUB9   A0A1B6MSH3   A0A0K8SDB0   A0A1W4WLE2   A0A1Y1LPS5   U5ETA3   F4W677   A0A151IKL6   A0A182FBH7   A0A1B6L203   A0A2M4BZV2   A0A2M4BZS4   A0A1B6GMC8   A0A1B0GHK0   A0A2M4BYG6   A0A1B0DC45   A0A2M4A0C6   A0A084WGN3   A0A182Q3I6   A0A2M3YX96   A0A2M3YXD4   A0A1L8DMZ6   W5J274   A0A336M831   N6TMR8   A0A0T6BCT6   A0A2S2Q4L2   A0A336KWL7   A0A182MXP6   A0A1I8MQM3   A0A1I8MQM4   A0A2S2PZ77   A0A1Y1MV34   A0A182H3R4   A0A182VL46   A0A023ELR9   A0A1A9WG84   Q7QGL3   A0A2S2N9E4   A0A1S4H717   A0A182HN67   A0A182Y628   C4WXQ7   T1E2W8   A0A1B0ANK0   A0A1S3CWT8   A0A1Q3FZ39   A0A182WEQ0   A0A1A9UPC7   A0A182RAN9   A0A1A9XCJ4   A0A182XB80   A0A1A9ZBS8   A0A1B0FG47   A0A1I8P860   A0A2H8TDK3   A0A182J3T3   B4MKN8   A0A182MHR4   B4J2V2   A0A0M5IYK9  

PDB

3LQ9     E-value=9.63248e-05,     Score=103

KEGG

101739441    no KO assigned | (RefSeq) protein charybde-like

GO

GO:0005737   GO:0009968   GO:0032006   GO:0006915   GO:0006979   GO:0008258   GO:0045926   GO:0006508   GO:0016020   GO:0007016   GO:0005856   GO:0007155   GO:0051015   GO:0003779   GO:0016021  

PANTHER

PTHR12478  

Length:

161

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00117

Exp number, first 60 AAs:

0.0001

Total prob of N-in:

0.06066

outside

1  -  161

 

 

Pi

201.163499

Theta

168.603573

Tajima's D

0.607417

CLR

0

CSRT

0.547422628868557

Interpretation

Uncertain