SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01041
Pre Gene Modal
BGIBMGA007396
Annotation
PREDICTED:_uncharacterized_protein_LOC106105275_[Papilio_polytes]
Location in the cell
Nuclear   Reliability : 4.52
 

Sequence

CDS
ATGTCCGAAGTGGAATGGACGAATGACGCTATTATTGAGCTCGTCAAAGAGTACAGCCGTCGTCCCGAGCTGTGGGACTCTAAGCACTCGCTGTACCGGACCCAAGCCGCCAAGTACGACGCGTGGGCGACCTTAGCGCTGCACTTCGACTGCGACATACCGGACCTGAGGAAGAAATTGAATTCGATTTTCGCTTCGCACAGACGCGAAAAGGCAAAAGTTCGCGCCGGCGGTCACTCGACCTGGTTCCTGTATCCTTACATGAAGTTCTGGCCGACGCATTTGGAGAATAACGACGCGGACAATACGACCTCGAAATCGGAGCAAGAGGAACCATCAGTCAACCATCAAGCGTCCGATCAGGCGTCATCATACGACAGCAGCGGTGACAACGAATCCATACAAGTCAAACAGGAGCCCATCGAACGTCCAAGAAAGAGATACATCCAAAGACCGCTTCTCAAGTCCAAGATCCTGAGGCCTATAAAGAAGCTATCACGAGGGAACGCTCACAGGAGTCAACTGGACAGTAGATTGGTAGAAGCTCTAAAGCTCCTCAAGAAATCCGAACAGTCCAGGAAGAAAGATGAGTGTGACAGCTTCGGAGAATACATAGCCACTTCGTTACGTAAACACGATGAACGAACTCAGTCAATGATTAAGCAAGCCATCAACAATATACTCTTCGAGCAAGAGATGAAGAAGTATTCCGCTGGACAGTACACGGTCGTTTTGACGGGAGTGGAGGAGAACCCCTTGATATTGGGAGACCATGAGAGCGACAACTGA
Protein
MSEVEWTNDAIIELVKEYSRRPELWDSKHSLYRTQAAKYDAWATLALHFDCDIPDLRKKLNSIFASHRREKAKVRAGGHSTWFLYPYMKFWPTHLENNDADNTTSKSEQEEPSVNHQASDQASSYDSSGDNESIQVKQEPIERPRKRYIQRPLLKSKILRPIKKLSRGNAHRSQLDSRLVEALKLLKKSEQSRKKDECDSFGEYIATSLRKHDERTQSMIKQAINNILFEQEMKKYSAGQYTVVLTGVEENPLILGDHESDN

Summary

EMBL
BABH01027637    NWSH01000690    PCG74756.1    KZ150078    PZC73918.1    KQ460685    + More
KPJ12821.1    KQ459232    KPJ02471.1    AGBW02009414    OWR50880.1    JTDY01002748    KOB70793.1    GAIX01003565    JAA88995.1    NEVH01002683    PNF41782.1    GEZM01087764    JAV58494.1    KK852432    KDR23985.1    LJIG01001616    KRT85324.1    GBHO01035467    GBHO01006950    GBHO01006949    GBHO01006944    GBHO01006941    GBHO01002371    GBHO01002370    GBHO01002369    GBHO01002368    GBHO01002367    GBHO01002364    GBHO01002363    GBRD01011705    GBRD01011704    GBRD01011703    GBRD01011702    JAG08137.1    JAG36654.1    JAG36655.1    JAG36660.1    JAG36663.1    JAG41233.1    JAG41234.1    JAG41235.1    JAG41236.1    JAG41237.1    JAG41240.1    JAG41241.1    JAG54119.1    APGK01049447    APGK01049448    KB741154    ENN73653.1    NEVH01016943    PNF25136.1    PNF25137.1    GGMR01014028    MBY26647.1    NEVH01016945    PNF25029.1    KQ459988    KPJ18795.1    GL763924    EFZ19065.1    GGMS01003176    MBY72379.1    ADTU01008311    KQ978589    KYN29977.1    KQ460650    KPJ13131.1    GEBQ01000940    JAT39037.1    KQ981880    KYN33967.1    ODYU01005868    SOQ47194.1    KQ982174    KYQ59369.1    NWSH01006266    PCG63547.1    GAIX01009087    JAA83473.1    KZ150071    PZC74050.1    MWRG01006897    PRD28603.1    BABH01032319    KQ460949    KPJ10492.1    ODYU01004940    SOQ45326.1    ABLF02018800    GGMS01002510    MBY71713.1    KQ459579    KPI99467.1    LJIG01002611    KRT84329.1    NEVH01012030    PNF31028.1    GEDC01013756    JAS23542.1    ABLF02020255    KQ460106    KPJ17744.1    KZ149893    PZC78951.1    KQ971338    EFA01674.1    GGMS01011227    MBY80430.1    KK853625    KDR04205.1    GGMS01016655    MBY85858.1    GBHO01039940    JAG03664.1    GDHC01009490    JAQ09139.1    ABLF02014879    ODYU01009635    SOQ54205.1    GEDC01003828    JAS33470.1    GL445574    EFN89378.1    JTDY01007687    KOB65013.1    KQ434773    KZC03949.1    ACPB03000414    ACPB03000415    KQ414914    KOC59506.1    KB632166    ERL89307.1    NEVH01004410    PNF39635.1    NEVH01008231    PNF34374.1    GGMS01017438    MBY86641.1    GDQN01006052    JAT85002.1    GEDC01003999    JAS33299.1    NWSH01000409    PCG76610.1    GGMR01009518    MBY22137.1    GEDC01017363    JAS19935.1    NWSH01004534    PCG64978.1    KK114398    KFM62349.1    APGK01028431    KB740687    ENN79498.1   
Pfam
PF10545   MADF_DNA_bdg
Interpro
IPR006578   MADF-dom        + More
IPR017877   Myb-like_dom       

Ontologies

GO

Topology

Length:
262
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0036
Exp number, first 60 AAs:
0.00018
Total prob of N-in:
0.06280
outside
1  -  262
 
 

Population Genetic Test Statistics

Pi
200.314737
Theta
172.948453
Tajima's D
0.518526
CLR
0
CSRT
0.51962401879906
Interpretation
Uncertain
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