Gene

KWMTBOMO01039

Pre Gene Modal

BGIBMGA007371

Annotation

Bm8_interacting_protein_2d-2_[Bombyx_mori]

Location

Bomo_Chr3(-):651438-654075      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.872

CDS

ATGAACTCAAACTCGAGACAATATCGCGAAAGGTTGATCGATGAAGTCAAAAAATACCCCGTTTTGTGGGACACGAAACATGAAAATCATAGGGACATCGACGTGCGAGACCGATGCTGGTTAGAGATATCCGAGCGCATGGGAGCTAACAGTGAAGTCCTTAAGCGAGAATGGAAGATCCTAAGGGACTCTATGCGTCAGGCCCTGAAGCGGATGAAAAGGGGTGACACAACAAAAGCTGGTGTTCCTTCCAAGAAGTGGCAGTACCAGAGTAGGATGGCGTTTGTTCTGCCTCACATGACCATGAGGAGGAACCAGAGGCACGCAATCCGCGAAGATATCAAAATGGACGAGACCGAGGTTCAATCAGACCAGGAGCAAGAGATCTGGGACCCCGGTAACGCCGATCAAGATTCGCTGGATTTATTCTTCGCCAGCGTATGTCAGAGTACGAAGCGCTTACCCAAAAAATACCAAGGTTTGGTCAAGAGACAAGTCCTCGACGTTTTGCTGAAGGTTGAGGAGGAGTGTGAGAGTGAACATGGGGAGTCAAAGGTAGGAGTCGCAAAGGGCTTTGAGTGA

Protein

MNSNSRQYRERLIDEVKKYPVLWDTKHENHRDIDVRDRCWLEISERMGANSEVLKREWKILRDSMRQALKRMKRGDTTKAGVPSKKWQYQSRMAFVLPHMTMRRNQRHAIREDIKMDETEVQSDQEQEIWDPGNADQDSLDLFFASVCQSTKRLPKKYQGLVKRQVLDVLLKVEEECESEHGESKVGVAKGFE

Uniprot

D5MTP4   A0A212FAV3   A0A194R560   A0A194QBU6   A0A2W1BJN8   A0A0L7LED1   + More
A0A2A4JMZ9   T1IF58   A0A2W1BI08   A0A212EL14   A0A2A4JZM3   A0A2H1VBW8   A0A194RCP8   A0A194PQL9   A0A0L7LCP5   A0A194Q8M9   A0A194R4X7   A0A194QAA4   A0A1Y1KAU4   A0A2P8Y7S1   A0A2S2N6T0   A0A2A4IZ15   A0A1E1W2E1   A0A2H1WDZ1   A0A1Y1KAP0   V5G9V6   D6W8Y3   V5GQM7   B4KR31   A0A2H1VIR4   B3MAE8   A0A1A8LKB3   A0A1I8MB62   T1PJ97   A0A0C9RD70   A0A3B0IZL6   A0A2H1W8L6   A0A3B0J3L3   A0A3P9I971   B4GCV9  

Pubmed

19121390    22752911    22118469    26354079    28756777    26227816    + More
28004739    29403074    18362917    19820115    17994087    25315136    17554307   

EMBL

BABH01027625    AB559581    BAJ07615.1    AGBW02009414    OWR50872.1    KQ460685    + More
KPJ12817.1    KQ459232    KPJ02465.1    KZ150078    PZC73915.1    JTDY01001496    KOB73729.1    NWSH01001017    PCG73098.1    ACPB03001353    ACPB03001354    PZC73911.1    AGBW02014166    OWR42161.1    NWSH01000353    PCG77094.1    ODYU01001734    SOQ38338.1    KQ460615    KPJ13681.1    KQ459602    KPI93430.1    JTDY01001685    KOB73164.1    KQ459299    KPJ01892.1    KQ460761    KPJ12564.1    KPJ02463.1    GEZM01087625    JAV58559.1    PYGN01000835    PSN40204.1    GGMR01000258    MBY12877.1    NWSH01005204    PCG64353.1    GDQN01009907    JAT81147.1    ODYU01007968    SOQ51186.1    GEZM01087623    JAV58562.1    GALX01001556    JAB66910.1    KQ971312    EEZ98234.1    GALX01005908    JAB62558.1    CH933808    EDW10387.1    ODYU01002793    SOQ40730.1    CH902618    EDV40199.1    HAEF01006957    SBR44339.1    KA648195    AFP62824.1    GBYB01011082    JAG80849.1    OUUW01000001    SPP73864.1    ODYU01007041    SOQ49439.1    SPP73862.1    CH479181    EDW32522.1   

Proteomes

UP000005204    UP000007151    UP000053240    UP000053268    UP000037510    UP000218220    + More
UP000015103    UP000245037    UP000007266    UP000009192    UP000007801    UP000095301    UP000268350    UP000265200    UP000008744   

PRIDE

D5MTP4   

Pfam

PF10545   MADF_DNA_bdg        + More
PF02944   BESS

Interpro

IPR004210   BESS_motif        + More
IPR006578   MADF-dom       
IPR039353   TF_Adf1       
IPR013087   Znf_C2H2_type       

ProteinModelPortal

D5MTP4   A0A212FAV3   A0A194R560   A0A194QBU6   A0A2W1BJN8   A0A0L7LED1   + More
A0A2A4JMZ9   T1IF58   A0A2W1BI08   A0A212EL14   A0A2A4JZM3   A0A2H1VBW8   A0A194RCP8   A0A194PQL9   A0A0L7LCP5   A0A194Q8M9   A0A194R4X7   A0A194QAA4   A0A1Y1KAU4   A0A2P8Y7S1   A0A2S2N6T0   A0A2A4IZ15   A0A1E1W2E1   A0A2H1WDZ1   A0A1Y1KAP0   V5G9V6   D6W8Y3   V5GQM7   B4KR31   A0A2H1VIR4   B3MAE8   A0A1A8LKB3   A0A1I8MB62   T1PJ97   A0A0C9RD70   A0A3B0IZL6   A0A2H1W8L6   A0A3B0J3L3   A0A3P9I971   B4GCV9  

KEGG

100500750    no KO assigned | (RefSeq) Bm8 interacting protein 2d-2

GO

GO:0003677   GO:0005634   GO:0001099   GO:0006355   GO:0003700   GO:0003713   GO:0005622   GO:0006508   GO:0016020   GO:0007016   GO:0005856   GO:0007155   GO:0051015   GO:0003779   GO:0016021  

PANTHER

PTHR12243  

Subcellular location

Nucleus  

Length:

193

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.41006

outside

1  -  193

 

 

Pi

60.48165

Theta

81.741922

Tajima's D

-1.111188

CLR

143.171856

CSRT

0.117294135293235

Interpretation

Uncertain