Silkworm Genome Informatics Database

Gene

KWMTBOMO01037

Pre Gene Modal

BGIBMGA007394

Annotation

PREDICTED:_uncharacterized_protein_LOC101738925_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr3(+):573676-577151 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.855

CDS

ATGCCCAATGAAGTGATGATAAAACAAGAGTTCGACAGTGACGCTTCCATGTCGCCGCCGGTAGGGCGCTTAGTCGACTGTAACCAAGCTGAAGATCGAAAGATGATAAGGTTGGTGCGGGACCGGCCTTTGCTGTACGCCCGAAGTAATATGCCCGTTGCCAGTTATTACGCGCAAGTCAAAATGCTGTGGCAGGAGGTCGCCGACGATATGGGTTGGAGCGTCCCTGACGTCAGAAGAAAGTGGTCGCACATCAGAAACTCATACTCAAGACACCTTCGCAACGAGATCCACGGCGCCCGCACGGGAAAGGGCCGCATGGTGTCCAGGTGGTACTTAGCTGATGAACTGGAATTCCTCAAAGAGCACATGGCTACCGACGTAAGATCGTCTCCATACCCCACGACATACGCTCCCAGCTACCTAGAAATTGACATGGCGAAAAAAACAGCCGAGGACACCTTGGATCCCTTCATCCATAACCCTTGGTTCACTCTCGCCACCAGTCGCACCAAGATCGAGGACCGGGAAGACTCCAGCTCACCTCACAGCGTGCGGACGGACGCCGTGGGCTCGACCAGCCAGAGTTTCGAAGCTGACGAGAATTCCGCGTACTTCCAATTCTTTAGAGGAATACATAATGATTACCAGGAACTGCCCCCGAAGAAACAGAGACTATTCAGGCGACAGTGTCTTCATTTCCTGCACAACTTGCTGGACGACAGTGACGGCCACGATCAGAGTAGCGCTATTAATTTATCCAATAACGCTGACAGCAATTCCAGTGATACAGATATAAACATCTTGCCTCATTAG

Protein

MPNEVMIKQEFDSDASMSPPVGRLVDCNQAEDRKMIRLVRDRPLLYARSNMPVASYYAQVKMLWQEVADDMGWSVPDVRRKWSHIRNSYSRHLRNEIHGARTGKGRMVSRWYLADELEFLKEHMATDVRSSPYPTTYAPSYLEIDMAKKTAEDTLDPFIHNPWFTLATSRTKIEDREDSSSPHSVRTDAVGSTSQSFEADENSAYFQFFRGIHNDYQELPPKKQRLFRRQCLHFLHNLLDDSDGHDQSSAINLSNNADSNSSDTDINILPH

Uniprot

H9JCZ7 A0A194QAK4 A0A194RAC7 A0A212FAW8 A0A2A4JH56 A0A2W1BQE3 + More
A0A0A1X8G3 A0A0L7QUC5 A0A2C9LX91 A0A1B0CWN6 A0A2S2QD96 A0A2P6KUI8 A0A2A3ELW4 A0A088A172 A0A3B0J814 A0A3Q0IHN0 A0A2P8YNJ0 A0A1B6E2T8 A0A1B6D1X8 A0A1W4WNE2

Pubmed

19121390 26354079 22118469 28756777 25830018 15562597 + More
29403074

EMBL

BABH01027618 KQ459232 KPJ02464.1 KQ460685 KPJ12816.1 AGBW02009414 + More
OWR50870.1 NWSH01001595 PCG70760.1 KZ150078 PZC73913.1 GBXI01007262 JAD07030.1 KQ414735 KOC62164.1 AJWK01032718 GGMS01006496 MBY75699.1 MWRG01005086 PRD29989.1 KZ288215 PBC32697.1 OUUW01000002 SPP76082.1 PYGN01000467 PSN45816.1 GEDC01005084 GEDC01002857 JAS32214.1 JAS34441.1 GEDC01022998 GEDC01017597 JAS14300.1 JAS19701.1

Proteomes

UP000005204 UP000053268 UP000053240 UP000007151 UP000218220 UP000053825 + More
UP000076420 UP000092461 UP000242457 UP000005203 UP000268350 UP000079169 UP000245037 UP000192223

PRIDE

H9JCZ7

Pfam

PF10545   MADF_DNA_bdg        + More
PF02944   BESS
PF03221   HTH_Tnp_Tc5
PF05253   zf-U11-48K

Interpro

IPR006578   MADF-dom        + More
IPR039353   TF_Adf1
IPR004210   BESS_motif
IPR006600   HTH_CenpB_DNA-bd_dom
IPR009057   Homeobox-like_sf
IPR022776   TRM13/UPF0224_CHHC_Znf_dom

SUPFAM

SSF46689 SSF46689

ProteinModelPortal

H9JCZ7 A0A194QAK4 A0A194RAC7 A0A212FAW8 A0A2A4JH56 A0A2W1BQE3 + More
A0A0A1X8G3 A0A0L7QUC5 A0A2C9LX91 A0A1B0CWN6 A0A2S2QD96 A0A2P6KUI8 A0A2A3ELW4 A0A088A172 A0A3B0J814 A0A3Q0IHN0 A0A2P8YNJ0 A0A1B6E2T8 A0A1B6D1X8 A0A1W4WNE2

KEGG

101738925 no KO assigned | (RefSeq) uncharacterized LOC101738925

GO

GO:0016853 GO:0003677 GO:0005634

PANTHER

PTHR12243

Subcellular location

Nucleus

Length:

271

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00999

Exp number, first 60 AAs:

0.00897

Total prob of N-in:

0.04500

outside

1 - 271

Pi

208.206503

Theta

159.369345

Tajima's D

-1.245714

CLR

112.56107

CSRT

0.0970951452427379

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics