Gene

KWMTBOMO01027

Pre Gene Modal

BGIBMGA007388

Annotation

PREDICTED:_Ig-like_and_fibronectin_type-III_domain-containing_protein_T04A11.3_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr3(+):309116-366121      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.737 PlasmaMembrane   Reliability : 1.626

CDS

ATGAGAACGACATGGAGCTTGGTGCTTTTGGCGCTTTTTGTCATCGTCTTAGCTGACTCGACTGAAGAACTCAAAACTTCAGTGGAGAATACAAGTACGTCTACGGACAGCTCTCAAGAAGATGTCGAGCCCAAAGAAGCCTGGATGCGAGCTCCGGGCGGAGGCGTAACAGTAAAGAGTGGCGAAGATGCCTTATTAACTTGCGTGGTACTTGGAGCTAGAGGACGTCCAGTCTTCTGGAGGAGAGCCAGAGACCTCCAGTTATTAACAGCTGGAGCTGTAAGAGTCACAAGAGACGACAGAATACAGGTGCTTCATGATGACTCTGAAGAGCCGCTCCAAGGTCCCGGAATCAAGAAGGGCGGCGACGTGTGGGCGCTGGTCATCAAATCTGTGAAGCCTTCAGACGCTGGTCTTTACATGTGTGAACTGAACACTGAGCCTCCAGTTAGAAGCTTTCACAGACTTACTGTGATATCAAGAGGTCTTACTCCTCCCGAGAACCGCAACATTACAGACACGTATTCAGCCTACACTCCCACGCTGTCGTCAGTGGCCATGGCACATAACTACACGGATTGCTGTCTCTCTTCTAATGTCAGTAAAAGCTGCCTGGGATTCTGCAGCATCCAGACTATACTCGAAGGCACTGGACAGGACCCGGAGACTTGCCAGCCGGATTTTCCTGCTATAGTCAAGTGTATGGCGGACGGTCGCAACCACGTGCCCTGCTGCGTCCAGGAGCATGTCCCGGATATATGCCAGGACGTGTGCCGAGGAGAGTTCACTCCGGTCACCGATAACATCAAGACTCATTACTCTTGTGCTTCCTACATGGAGAAGACATTAGCTTGCATTGTCGAGGGGATCGAACTTCTGCCAAGTCCTCCAGAAGACGTGGAAGTCGAGCCACTGAATGAGAAACAGTTGAATGTCTCGTGGAATCCACCAGTCCAGAACGCCGACACTATAACCGAATACATAGTCAATGTCACAACTTTGAGGTCTTTTGATGCTCACCTCATTGACCCGTCCGAAAGTTCTATTAGGAATAACACAGTGAGCAAGCCTATTACAGTTAAGGTACCTGCTAGTAAATCGTTCCTAGTGCTGGACGATCTACTGCCTTTCACGATGTATGAAATAACTGTGACTTCGTATAATATTCACGGGTCGAGTCTGCCCAGTTACGCTATCAGGTCATTAACATTAACTCCTGGGAAGATGAAGACCACAGAAGTAGCAGCAGCTCCCAAGTTACCGGACGTGAAGAAATGCTGTGAAGCAGGCGGAGTCAATCATTATGGTTGCATCAGTAAACTGTGTGATCCTACTAAGACTTTTGAAATTGAGCTGCAGGTGACAGATCTGATGATATGCGCGCCCTGGGCTGGGATCACGTTTGGATGCCTAGCTAATGGAATGGACCACACCCCTTGCTGCCGAGCTCGCGGTCTACCTGACTCCTGTCTTCCCCTGTGCAGTGGAAATATTACGTCGATTGACTTCAATCACTTTAAATGCCTTCGCTACATGAAGTCCTACACCAACTGTCTGCTCCAAGGGTACGGGGTTCTACCAGGGCCACCATCTAAGCTATACCTGACAAACATCGACACAGACTACGCCGTGGTTCATTGGTCACCCCCTACCGTCCTTGCAGACACGGTGCAAGCCTACAACTTATACTATCGCTCGCTGCAAGTTGATGACGATTACAGAGCTTTGGAGTTTGTTCACTCACCGTACATACTAGAAGATCTGGAGTCGAATACCGACTATGAGATATACGTGGAGGCTGTGAACGAGCACGGTGTTGGGGATCCTTCACCCAGACTCATATTTAGAACACAAAGTCAGGTAATAGAAGAAGAAATAGAAGAGGCAAACGCTTATAACGTAACTGCGTGCTGCGAAAGAGTTCAGCTCGCAGGAGTGTGCATGCCGCTCTGTTCTTACGATGCCAAAATGTCGGACCTCAGGACCTTGGCTCCGCTGTGCGCTCAGGAGTTCCACAAGATACTGCGATGTGGTGCTGGAGGTCGAAACCACGAGACCTGCTGCGCCAGGAGGGGCGTCCCCGGGATCTGTCGCGGAGTGTGCGCCGGCGCCTACACGGGGAGCGTCAATACTTGCGTGCCTTACATCGGCAATATCGTGCAGTGCTTTGAGGAAGGCACTGGTATACTGCCCGGTCCCCCTCGAGAGCTCCACGCGGTCATCTCGTCGAAGAACTTGTATTTGGACTGGGCGGCACCACAAGACGGTGCCAATGCTACATCCTACATTGTCTTCTGGCAAAAACTGGATAACAACACCCAGCCGTACAGCTACAACACCATGCAGTCCACTTACAACCAAATCAAAACAAATGACACGATGGTCACCATCCAACACGAGAGCTTGGAGGTGAACAGCACGTGCCACGCGTTCGTGGTGGCCGTCAACGAGCACGGCTCCTCGCTGCCATCCAGCATGCTGCTGTTTAACGTTACCGAAGAGGAGCAAGAAGTTTCTGGTATCCCATCCCACCCACATTCGCTGTCCGTATCGTCACACTCCGCCACGTGGCTTACCCTGACCTGGCAGCCACCGCAGTTCTCGCAAGCTGACGAGAAGATCACCTACACATTATTCTTCAAATCTCCAACTCAAATGGGTGCAAATATCACGAATATCACCACCACAGTACCTGGATATACGTTGGAGAAGCTTACCCCGAACACCCAGTACATAGTGTGGGTGAAAGCTCACGCTACAGCTGGAGACTCCTTGCCTTCTGAGACTTTACTGGCTTGGACGGATCCAGCATATCCTGCTTATGTAGAACCCCCGACGGTAAACCCCGTGAACCTGGTGATGGAAGGCTCCAGCATGACAATCCTTTGCATCGCCATGGGAACACCAACCCCAACAATATCTCTATATATATCTGGTCGTTTAGTGAGGCAGGATGTTACCAGACATATGGTGACAGTGATTCATAACGTTACCCGGGATATGGACCAGATCTCCTGCTACGCTGACAACGGGTACGGCACACCCATGCAGGCTTCCAGAAAGATTAATATATCTCATGTGCCATCGATCCAAGCGTCAGGCATCACAATGGCGGCGGCCGGTGACTCCGTTATCCTGGAATGCAGAGTGGAGGCACTTCCCAAACCTACCGTAGCCTTCTGGAGGGACCCTAACGGTAGAACTCCCGTTATTGATGGACCTAACTACAGTATACAGCTTCAACCGGACCTGGAGGAACCAACCAAATATACCATGCGTCTGATCATCAAGAAGATATCAGAAGCTGACGAAGGAGACTACTTCTGCCACGCTGAGAACGCCTTCGGGAAAGCCCTGAGGCCAGTCTCGGTTAGACTACGACCTACGACTCCTCATCACAATGTCACCGAGTGCTGCGCTCAGATGAACGTGTCCTCGCAGTGCATAGACGCCTGCAGCTTCCACCTCGACATGGACAATATCATGGACCGTCCGGAGTGCATGAACGACTTCGACAAGCTCATGAAGTGCGCTGCCGATGGATCCGATCATCGTAGTTGCTGCGCCTCTTGGGGCGTTCCGCGTAGTTGCTTGGAGCTGTGCCGAGGAGGGTCAGTGACCAGGTCGTGCGCGCTGCAACACGCCCGGCGCGCCCTGGCCTGCTTCAGGGACGCGGGCGGGAAGCTGCCCGGCCCACCCAGGAACTTAAAGGCACATGTAGCTCCGACCCCTAACGCTGTACTATTAAGTTGGGATCCTCCAGTCAAGAACCCTCAAACCGTGTACCTATATCGCGTGTTCTGGCGCGCCTACGGAGCCAAAGTCCCGGAGAAGCTGGACACCAGCGAGACCAGCGTCGTGCTGACCGGTCTCCAAGATGACATCAGATATGAATGCGTCGTGAAAGCTGCTAATGACGTCGGAACCTCTTCTCTCAGCCCGTCAATAATGTTCACAACCAGCGGCCAAGAGTCTTCAGCCGCAGCAGCCCCAGTGGCGACTGGATCCGCAGCACCTGCAGTGGGCGTCGCCATGGCCTGCGTTGTTGTTGCCGCTATTCTACTTGCAGCCGGATTCTACTACAGACACAGAAAGAATCTCCGACTGAAGGCGCAAGGTGGAGTGGCGTTTGAGAACCCAAGTTACCTGAGAGAACCAAACCCTGATACCGTCATTAATGGCACCGTACCTAACGGCAATGCCAATGGCGGAAACGGAGTCACAAACGGCGTCTCCAACAGCGCAGCTTGGAGACAAGAAACCCTTCAGAATCCCGGCACAGCAGTGCCCACCGCCAGGGAGGTGGAGCCTACTCTTTATGAGGAATTGAAGCTTGGACAGGACGGAGCTGGTTTCAAGAGGCTGAAACCATAG

Protein

MRTTWSLVLLALFVIVLADSTEELKTSVENTSTSTDSSQEDVEPKEAWMRAPGGGVTVKSGEDALLTCVVLGARGRPVFWRRARDLQLLTAGAVRVTRDDRIQVLHDDSEEPLQGPGIKKGGDVWALVIKSVKPSDAGLYMCELNTEPPVRSFHRLTVISRGLTPPENRNITDTYSAYTPTLSSVAMAHNYTDCCLSSNVSKSCLGFCSIQTILEGTGQDPETCQPDFPAIVKCMADGRNHVPCCVQEHVPDICQDVCRGEFTPVTDNIKTHYSCASYMEKTLACIVEGIELLPSPPEDVEVEPLNEKQLNVSWNPPVQNADTITEYIVNVTTLRSFDAHLIDPSESSIRNNTVSKPITVKVPASKSFLVLDDLLPFTMYEITVTSYNIHGSSLPSYAIRSLTLTPGKMKTTEVAAAPKLPDVKKCCEAGGVNHYGCISKLCDPTKTFEIELQVTDLMICAPWAGITFGCLANGMDHTPCCRARGLPDSCLPLCSGNITSIDFNHFKCLRYMKSYTNCLLQGYGVLPGPPSKLYLTNIDTDYAVVHWSPPTVLADTVQAYNLYYRSLQVDDDYRALEFVHSPYILEDLESNTDYEIYVEAVNEHGVGDPSPRLIFRTQSQVIEEEIEEANAYNVTACCERVQLAGVCMPLCSYDAKMSDLRTLAPLCAQEFHKILRCGAGGRNHETCCARRGVPGICRGVCAGAYTGSVNTCVPYIGNIVQCFEEGTGILPGPPRELHAVISSKNLYLDWAAPQDGANATSYIVFWQKLDNNTQPYSYNTMQSTYNQIKTNDTMVTIQHESLEVNSTCHAFVVAVNEHGSSLPSSMLLFNVTEEEQEVSGIPSHPHSLSVSSHSATWLTLTWQPPQFSQADEKITYTLFFKSPTQMGANITNITTTVPGYTLEKLTPNTQYIVWVKAHATAGDSLPSETLLAWTDPAYPAYVEPPTVNPVNLVMEGSSMTILCIAMGTPTPTISLYISGRLVRQDVTRHMVTVIHNVTRDMDQISCYADNGYGTPMQASRKINISHVPSIQASGITMAAAGDSVILECRVEALPKPTVAFWRDPNGRTPVIDGPNYSIQLQPDLEEPTKYTMRLIIKKISEADEGDYFCHAENAFGKALRPVSVRLRPTTPHHNVTECCAQMNVSSQCIDACSFHLDMDNIMDRPECMNDFDKLMKCAADGSDHRSCCASWGVPRSCLELCRGGSVTRSCALQHARRALACFRDAGGKLPGPPRNLKAHVAPTPNAVLLSWDPPVKNPQTVYLYRVFWRAYGAKVPEKLDTSETSVVLTGLQDDIRYECVVKAANDVGTSSLSPSIMFTTSGQESSAAAAPVATGSAAPAVGVAMACVVVAAILLAAGFYYRHRKNLRLKAQGGVAFENPSYLREPNPDTVINGTVPNGNANGGNGVTNGVSNSAAWRQETLQNPGTAVPTAREVEPTLYEELKLGQDGAGFKRLKP

Uniprot

H9JCZ1   A0A194R598   A0A194QAE3   A0A212FC12   D6WUX6   A0A2J7Q911   + More
A0A2J7Q910   A0A2J7Q905   A0A2J7Q904   A0A067R523   A0A1Y1JVS9   A0A1B6LE30   A0A2H8TI33   A0A2S2NH72   E0VKS0   X1WIM8   A0A2M4CPR7   A0A182QM78   A0A182Y724   A0A182HY31   A0A182V090   A0A182LH69   A0A1Q3FP62   A0A0P6K0T8   A0A182IJX7   E9G8I6   A0A1J1HXH7   A0A182N3A5   W5JBS4   A0A0P5U3I0   A0A0P5YHN5   A0A0P4Y9G3   A0A0N8CSU1   A0A0P4Y1L2   A0A0P5UQ81   A0A0P5UZQ9   A0A0P4YD55   A0A182WXF4   A0A182P390   A0A0P5NKK6   A0A0P5V5J0   A0A0P5VBJ1   A0A182KAY3   A0A0P5HKS8   A0A0P6FRZ0   A0A0P6E9R5   A0A182TRG8   A0A0P5NE43   A0A0P5U7T3   A0A0P6H4R4   A0A0P5JV32   A0A0P5H1G0   A0A182FBX9   A0A0P5YF10   A0A0P5PQ51   A0A0N8C100   A0A0P6A804   A0A182W1P3   A0A182RLH3   A0A182M1H3   A0A0P6HVV0   A0A0N8CRS8   A0A0P5RS72   A0A0P5EUI8   A0A0P5J579   A0A0P6GGQ5   A0A0P5LLH8   A0A0P5TF35   A0A0P4ZGC3   A0A0P6ESG0   A0A336L0N9   A0A1B0CAU0   A0A0P6FXX4   A0A0P5Z1M5   A0A0P4XZ49   A0A0P4ZWM5   A0A0P5TCG4   A0A0P5UBM0   A0A0P4YJ52   A0A0P6FH27   A0A0P5V9I4   A0A084VHZ0   A0A0P4XJ75   A0A0P5NEI0   A0A0P5VLN8   A0A0P6EKR7   A0A0P6EN21   A0A0P5QST5   A0A0P6F5D9   A0A0P5KBX1   A0A0P5NHE0   A0A0P5C4F6   A0A0P5NSW7   A0A0P5S629   B0WTZ4   A0A0P5IUE1   A0A0P5HCS6   A0A0P5HDC8   A0A0P5H9V8  

Pubmed

19121390    26354079    22118469    18362917    19820115    24845553    + More
28004739    20566863    25244985    20966253    26999592    21292972    20920257    23761445    24438588   

EMBL

BABH01027589    BABH01027590    BABH01027591    KQ460685    KPJ12852.1    KQ459232    + More
KPJ02503.1    AGBW02009241    OWR51271.1    KQ971357    EFA08351.2    NEVH01016943    PNF25066.1    PNF25065.1    PNF25067.1    PNF25064.1    KK852699    KDR18237.1    GEZM01099235    JAV53419.1    GEBQ01018034    JAT21943.1    GFXV01001875    MBW13680.1    GGMR01003911    MBY16530.1    DS235250    EEB13976.1    ABLF02029771    GGFL01003115    MBW67293.1    AXCN02001118    AXCN02001119    AXCN02001120    APCN01004485    APCN01004486    APCN01004487    GFDL01005743    JAV29302.1    GDUN01000782    JAN95137.1    GL732535    EFX84263.1    CVRI01000035    CRK92691.1    ADMH02001690    ETN61421.1    GDIP01120473    JAL83241.1    GDIP01071442    GDIP01071441    JAM32273.1    GDIP01232960    GDIP01109921    GDIP01072741    GDIP01071479    JAI90441.1    GDIP01102319    JAM01396.1    GDIP01234859    JAI88542.1    GDIP01109873    GDIP01069828    JAL93841.1    GDIP01107773    JAL95941.1    GDIP01229156    JAI94245.1    GDIQ01143860    JAL07866.1    GDIP01105222    JAL98492.1    GDIP01102320    JAM01395.1    GDIQ01231677    JAK20048.1    GDIQ01043554    JAN51183.1    GDIQ01268677    GDIQ01239382    GDIQ01179652    GDIQ01068791    GDIQ01068790    GDIQ01065889    GDIQ01064492    GDIQ01048992    GDIQ01047496    JAN28848.1    GDIQ01143857    JAL07869.1    GDIP01118426    JAL85288.1    GDIQ01034646    JAN60091.1    GDIQ01199238    GDIQ01184600    GDIQ01184599    GDIQ01181045    GDIQ01146611    JAK52487.1    GDIQ01233329    JAK18396.1    GDIP01072740    GDIP01045980    GDIP01044437    JAM30975.1    GDIQ01125460    JAL26266.1    GDIQ01125459    JAL26267.1    GDIP01034336    JAM69379.1    AXCM01006843    GDIQ01038046    JAN56691.1    GDIP01105223    JAL98491.1    GDIQ01115773    GDIQ01098128    GDIQ01098127    JAL53599.1    GDIQ01267790    JAJ83934.1    GDIQ01229429    JAK22296.1    GDIQ01053397    JAN41340.1    GDIQ01192784    JAK58941.1    GDIQ01092469    JAL59257.1    GDIP01213662    JAJ09740.1    GDIQ01059046    JAN35691.1    UFQS01001248    UFQT01001248    SSX09910.1    SSX29633.1    AJWK01004268    AJWK01004269    AJWK01004270    GDIQ01059047    JAN35690.1    GDIP01063378    JAM40337.1    GDIP01234860    JAI88541.1    GDIP01207563    GDIP01086029    JAJ15839.1    GDIP01129924    JAL73790.1    GDIP01115368    JAL88346.1    GDIP01229157    JAI94244.1    GDIQ01047449    JAN47288.1    GDIP01118427    JAL85287.1    ATLV01013251    KE524847    KFB37584.1    GDIP01240523    JAI82878.1    GDIQ01146610    JAL05116.1    GDIP01098321    JAM05394.1    GDIQ01061184    JAN33553.1    GDIQ01061185    JAN33552.1    GDIQ01110072    JAL41654.1    GDIQ01061183    JAN33554.1    GDIQ01192785    JAK58940.1    GDIQ01142358    JAL09368.1    GDIP01180362    JAJ43040.1    GDIQ01142359    JAL09367.1    GDIQ01092422    JAL59304.1    DS232096    EDS34701.1    GDIQ01210380    JAK41345.1    GDIQ01229430    JAK22295.1    GDIQ01229432    JAK22293.1    GDIQ01229431    JAK22294.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000007151    UP000007266    UP000235965    + More
UP000027135    UP000009046    UP000007819    UP000075886    UP000076408    UP000075840    UP000075903    UP000075882    UP000075880    UP000000305    UP000183832    UP000075884    UP000000673    UP000076407    UP000075885    UP000075881    UP000075902    UP000069272    UP000075920    UP000075900    UP000075883    UP000092461    UP000030765    UP000002320   

PRIDE

H9JCZ1   

Pfam

PF01682   DB        + More
PF00041   fn3
PF07686   V-set
PF07679   I-set
PF00047   ig

Interpro

IPR036179   Ig-like_dom_sf        + More
IPR003598   Ig_sub2       
IPR036116   FN3_sf       
IPR002602   DB       
IPR013783   Ig-like_fold       
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR003961   FN3_dom       
IPR013098   Ig_I-set       
IPR013106   Ig_V-set       
IPR006553   Leu-rich_rpt_Cys-con_subtyp       
IPR032675   LRR_dom_sf       
IPR013151   Immunoglobulin       

SUPFAM

SSF48726   SSF48726        + More
SSF49265   SSF49265       

Gene 3D

2.60.40.10     3.80.10.10    

CDD

cd00063  FN3

ProteinModelPortal

H9JCZ1   A0A194R598   A0A194QAE3   A0A212FC12   D6WUX6   A0A2J7Q911   + More
A0A2J7Q910   A0A2J7Q905   A0A2J7Q904   A0A067R523   A0A1Y1JVS9   A0A1B6LE30   A0A2H8TI33   A0A2S2NH72   E0VKS0   X1WIM8   A0A2M4CPR7   A0A182QM78   A0A182Y724   A0A182HY31   A0A182V090   A0A182LH69   A0A1Q3FP62   A0A0P6K0T8   A0A182IJX7   E9G8I6   A0A1J1HXH7   A0A182N3A5   W5JBS4   A0A0P5U3I0   A0A0P5YHN5   A0A0P4Y9G3   A0A0N8CSU1   A0A0P4Y1L2   A0A0P5UQ81   A0A0P5UZQ9   A0A0P4YD55   A0A182WXF4   A0A182P390   A0A0P5NKK6   A0A0P5V5J0   A0A0P5VBJ1   A0A182KAY3   A0A0P5HKS8   A0A0P6FRZ0   A0A0P6E9R5   A0A182TRG8   A0A0P5NE43   A0A0P5U7T3   A0A0P6H4R4   A0A0P5JV32   A0A0P5H1G0   A0A182FBX9   A0A0P5YF10   A0A0P5PQ51   A0A0N8C100   A0A0P6A804   A0A182W1P3   A0A182RLH3   A0A182M1H3   A0A0P6HVV0   A0A0N8CRS8   A0A0P5RS72   A0A0P5EUI8   A0A0P5J579   A0A0P6GGQ5   A0A0P5LLH8   A0A0P5TF35   A0A0P4ZGC3   A0A0P6ESG0   A0A336L0N9   A0A1B0CAU0   A0A0P6FXX4   A0A0P5Z1M5   A0A0P4XZ49   A0A0P4ZWM5   A0A0P5TCG4   A0A0P5UBM0   A0A0P4YJ52   A0A0P6FH27   A0A0P5V9I4   A0A084VHZ0   A0A0P4XJ75   A0A0P5NEI0   A0A0P5VLN8   A0A0P6EKR7   A0A0P6EN21   A0A0P5QST5   A0A0P6F5D9   A0A0P5KBX1   A0A0P5NHE0   A0A0P5C4F6   A0A0P5NSW7   A0A0P5S629   B0WTZ4   A0A0P5IUE1   A0A0P5HCS6   A0A0P5HDC8   A0A0P5H9V8  

PDB

6EG0     E-value=5.58902e-12,     Score=177

KEGG

101746237    no KO assigned | (RefSeq) Ig-like and fibronectin type-III domain-containing protein T04A11.3

GO

GO:0016021   GO:0030017   GO:0005515   GO:0008270   GO:0006511   GO:0004888   GO:0007016   GO:0005856   GO:0007155   GO:0051015   GO:0003779  

SignalP

Position:   1 - 18,         Likelihood:  0.996850

 

 

Length:

1457

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

23.60789

Exp number, first 60 AAs:

0.87095

Total prob of N-in:

0.05015

outside

1  -  1338

TMhelix

1339  -  1361

inside

1362  -  1457

 

 

Pi

206.583137

Theta

175.855158

Tajima's D

0.236344

CLR

0.858313

CSRT

0.438878056097195

Interpretation

Uncertain