Gene

KWMTBOMO01018  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007380

Annotation

PREDICTED:_Golgi-specific_brefeldin_A-resistance_guanine_nucleotide_exchange_factor_1_isoform_X2_[Papilio_xuthus]

Location

Bomo_Chr3(-):56486-76755      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.138

CDS

ATGCCCGGGAATGGAATTTTCGTGGTCCAAGGCGAGATGGCGATGCTGGTCACAGCAATGCGACGGAGTACCAGATGGGGCTCGCATTCATTCCCTAATGAGGAATATGATATGTTAATGCGAACCTTCCAGGACCTAAAGACGATACTGTACCAAGTGGATGACTTGCGGCTATTAGATCCAGCTACTTATCTCAGCCCTTTTCTGGAAGTAATCAGAAGTAAAGAAACAACTGGCCCCGTCACTAACCTTGCACTCTCTGCGGTGCACAAGTTTATGTCTTATGGTCTAATAGATCCAGCCCATCCAAGTGTGCCAGCAACTGTTGAGGACATTGCAGATGCAGTCACACATGCTAGATTTGTTGGCACTGACCATAGCTCAGATGGAGTGGTACTCATGAAGATATTGCAGGTGCTGCGCACTCTTATGCTAAGTCCAGAAGGTGCCATGCTGACTGATGAGAGTGTCTGTGAGATCATGCTCAGCTGTTTCCGGATCTGCTTTGAGACACGACTCACAGAGCTGCTGCGACGGTTCGCGGAGCAGTGCCTGCGCGACATGACGCAGCTCGTGTTCTCGCGCCTGGCGCACTTCCCGCCGGAGCCCGGCGCCGCGACCGACTTCTCCACAGTGGGCAGTCTCTCTCTGAAGAAGAGAGAGAAAACTACCAAAAAGAAGAGCGCCAGTGCCCTCAGTAGTCCTGTGGCCGACAGGAAGGGCGCGGGCGGGGGGCGGGGCAGTCCTGCTGCAGCGCCCGCGGACCACGCCGAGCCCGACAGGACCGATCCGCTGCAACGGCTTCAAGACAAGAACCTCATCAATGAAGCGGAAATAACGATAGAGCCCGTCGAGTCGGCACCCGCCTCCACCAAGCACGCGCGCCACTCCTCCATGGACCTCGCCGCCGAGAACTCTACCATCACGCAGCTACTAGAGAAGTGCGTCGCCGGGGAGTCACACTCCGACTCGCAGCCGGACTCGCGACCCGACCCGGACTCGCAGCCGGACTCGCGGCCGGACCCCGACTCGCAGCCGGACTCGCAGACCGACGCTCCACAAGAGTTGGACCGGACAACGGCGGAGGGGGACGGCGCGACCGGCAGCAAGGCGGACCACGACGCAGAGGCCGCGGAGGAGTTCGTGAACCACAGAGGGATCCGCTTCACTCCACAGCACGACACCGTCACCCTCCGCCCCTACGGAGCGCCCTGCATCAGGGAACTCTTCCGGTTCCTCATCACGCTGTGCAACCCCCTGGACGAGCAGAACACGTCGGCCATGGTGCAGCTGGGCCTGTCCCTGGTGGGCACGGCGCTGGAGGTCGGCGTGGATCAGATCGCCAGGTGTCCGTCCCTGCTGCAACTCGTTAAGGACCCGCTCTGCAGGAACCTCTTAAGTTTGCTGAGCACGGAGCGGATATCGATATTCGCTCTGGACCTCCAAGTCACCTTCCTGCTTTACGAAGCTCTCCGCTTCCATCTGAAATATCAAATCGAGGCGTTCTTCAAGAAGATCATAGAGATAGTGTCTGCCGACACGAGCAAATCCATCTACGAGCTGAAGGAGATCCAGCTCCTCGCCGTGGAGAGCGTCGTCCAGCTGTTCAGGATCCCTGGCTTCTGCGCCGAGCTCTATCTTAACTACGACTGCGACATCTACTGCGCCAACATCTTCGAAGACTTGATCAAGCTCTTGTCCACCAACGTGCTCTCCTCCGCCGCTCACAATATTCACGCGCCGTCCACGGAGGCGCTGCTCGCCGTCATGGAGACGGTCGAGGTCGGTATTCGGCTCGCCGACGCGCAGCCCGGCCAGGACGCACCCCCCGGCCAGGACGCGCCTCCCGGCCAGGACGCGCCCTCCCGCTCGGACGCGCCCCCCCGCCCGCGTGCGCACGTGTCGCTCGAGCTGGGCGGACTCGATGACGTCACGCTCGCGCCCCGGGACCCGCTGCCCACGGACGCCGAGTTAGACAACATCAGAAACTTAAAAAAGTGGGTGAGGCAGGGCACGGAGCTCTTCAACCAGAAGCCGGAGCGCGGCATACAGTTCCTGCAGGAGCACGGCGTGCTGGCGACACCGCTAGACCCTCACGAAGTGGCCATGTTTTTGAGGGAAAATCCTGACTTGGACAAGAAAATGATAGGCGAGTACATCTGCAAGCGCTCGTCCCGCGGCGAGTCGGCGGAGCACTGCGGCGACACGAGCGTGCTCGGCGCCTTCGCCGACAGCTTCGAGTTCGGCGGTCTGCGCATCGAGCAGGCGCTGCGGCTCTACCTAGAGACCTTCCGGCTGCCCGGCGAGGCGCCGCTCATCTTCCTCGTCATGGAGAAGTTCGCCGAGCGCTGGCACTCCACAAACGGATGTCCATTCGCGAACACGGACGCCGCCTTCAGACTGGCCTACGCAGTCATCATGCTGAACATGGACCAGCATAACCACAACGCCAAGAAGCTGAACGTGCCCATGACCGTCGAAGACTTCGTCAGAAACCTTCGCGGGTGCAACGGCTCCGGCGACTTCGACCAGGCGATGCTCGAGCAGGTCTACTACTCCATCAAGAACGAGGAGATGGTGATGCCGGCGGAGCGCGTGGGGCCGGTGCGCGACGCGTACCTGTGGCGCGTGCTGCAGCGCCGCGCCCCCCGCTACCGCGCGCTGCCCCCCGCGCACCCCTACGCCGCGCGCGTGCACGCCGCGCTGGCGCCGCCCGCCGTCGCCGCGCTGTCCGCCGCCTTCGAGCGCGAGCCCGCCGCGCGCAGCCTGGCCGCGCTGGAGCGCTGCGGCGCGCTGCTGGCGCGGCTGCCCGTGGACGAGCTCACGCTGGACTCGCTCGTGCTCACGCTCGTCAAGTTCACGGGCCTGCTGCAGCACCAGAGCTCCTCCTACATCGCCATAGGGGTGTCGCTGGGGCAGTCGGCGCGGAGCCAGCTGGCGCTGGGCGGCGCGTGCGGCATGGTGGCGCGGCACGGCGGCGCGCTGCGGGCGGCGTGGGAGCACGTGCTGCGCGCGGTGGGGGCGCTGTACCGGGGCCGCCTGCTGCCGCAGAGCATGGTGGAAGCCGAGGACTACCTGTCCCCGGACGGCAAGGTGTCGCTGCTGCCGGAGACCGCGCGGGGCCCGGAGTCCGGGCTGCTCTCCAGCCTCTACTCCTACATCGCGCTCGGCGAGACGGGCATGCGAGCTCCCACCCCGCACGAGAGGGCGCTGATGGACGCCGCGGCCAAGTGCGTGGCGGCCTGCAACCTGCCCGCGCTGCTCGTCACCGAGACCAAGTTCCTGCCGCTCGACAGCCTGCAGGCGCTGGTGGACGCGATGGTGACGGTGGGGGCGCCCCCGGACGCCGAGAGCCTGCAGCTCAACCCGGAGCTGGAGGACATGGCCGTGTTCTTCCTGGAGCTGCTCGGACAGACCTTGATACAGAACCGGGACCGGGCGGCGCGCGTGTGGGCGGCGGCGGCGGGCGCGCAGGCGGCGGCGCTGCGCTGGGCGGCGGCGCGGGGCGGCGGGCGGGCGGCGCGGCGCGTGCTGTGTGCCGTGCTGCGCTGTGCCGCGCGCCTCATGCGCGCCGAGCTGTGCGCCGCCGCCGTGCTGCAGCACCTCGCGCTGCTCTTCACTCTGCCGCAGGACGTCTTCCACCGGCACGCCGACGTGATATCGTGCGGGCTGCACGAGGTGGTGCGGACGTCGGCGCAGAACGTGCACGGCGGCGCGGAGTGGCAGCTGGTGCTGGCGCTGCTGTGCGCGGCCGGCGCCGGCGTGTGGCCCGCGGACAGCGCCGCGCTCGACCTGTCCAGCCGGTCGGGCTCGGAGGAGGAGGCCGCCGACCACGAGCTGTCGCAGTCGCCGCACGCACACGGCTGGATCCTGGTGGAGCGCGAGGCGGACCCGCCGGCGCGGGCGGACCCGGCCGTGCTGCAGCGCTGCGTGGAGACCTTGGCGCTGGTGGTGCGCGACCTGGCGCACGTCACCCCCTACAACTGCCGCGCCACCGTCGCCGCGCTGCGCATCGTCGCGCGCGCCGCCATGCGACACGGTCAAGAGAAGAGCCGCGACGACATCAAGTCACGATCCGGCTCGTCCCGGACCCGCGACGACTCCAGCGACGAGGAGACGGAGGACGTGGACCAGTACCACCTCATCAGCATACAGGTGCTGGACCTGATGCACACGCTGCACAGCCGCACGGCGCAGATCTTCGCGTGGTGGCGCGACGAGGCGGAGCAGCGGGGCCCGGCCGACCACGACCTCTGGGACATCGCCTGGAGCCCGCTGCTGCAGGCCATTGCGCTGTTCTGCACCGACCGCCGGAAGCAGGTGTCGAGGTGTGCCATGCGCTACCTGCAGCGCGCCCTGCTGGCGCCCGGGCTCAGCAGCATGGGCGGCGAGGCGTGGGAGGCTTGCTTCTACTCCGTGCTGTTCCCGCTGCTGGGCGGCCTGGGTCGCCGGCCGGACGCCGCCGCGCGCGCCAACACCCTCACCTGCAAGGTGCTGCTGCAGCACCTGGCGGCGCTGGCCTGCCGCCCCACGTTCTCGCGGCTGTGGACCCGCATGCTGCACGTGCAGCGCTCCCTGCTGCAGACCCAGCACGACGCGCTGGCCGAGGCGGCTCTGGAGTCTCTCAAGAACGTCATCCTCGTCATGGACTCTGTGCACATATTTAGGAACGAGGAGGGCTACAACGAGCTCTGGTTCATGACATGGGAGGTCATCGGCGAGTTCCTGCCGACCCTCAAGCAGGACATGTTCCCCGACGTGCCGGACGACGTGAAGCTGCCCACGAACCCGCTGAGCCACATGCAGTCTCTCCCGGCGTCGCTCCCCACCATCGTCCCGCCCACCTCCTCCCGGGATCCTGTCCAGGTACTTCCAGCACAATCCCCTGTGTGCGGCCCCAAGTCACCGCCCGCGGCCGCCGCGCCCCCGGTCAGCGGCATGGTGCCCATCAGGAACCCTCTTTACGACCAAATGGGATTGACTTCGTCTGTTTTACTTCAGCCGTTAAACGAGATGATATCGACCCCGATAGGCGCGTCTAGCGAGCCGCCCCCCGCCCGCCCGGCGCCGCCCCCCGCCCGGCCCGCGCCGCCCCCCGCCCGGCCCGCGCCGCCCCCCGCCCGCCCCGCGCCGCCCCCCGCGCGGCCCCCGCACTCGCTGCTGCTGGACATGGGCGACCAGTGCTCGCTGTACGCCGAGTACCTCTCGGACCCCTACACGGAGGCCGCGCCCTCGGACCGGAAGTCGTGCAGCGAGAGTGCCAGCCCGCTGCGCACCAACAAGACGCAGTTCAGTTCGACTGACAACGTGAGAGAGGACTCTGCCACGTTTACGTTTTCCACGTACTTCGGATCGAGCCACGAGACGTGCGGCTCTGACACATTCGACGCGCTGCTGACCGCGGACCGCAACTAG

Protein

MPGNGIFVVQGEMAMLVTAMRRSTRWGSHSFPNEEYDMLMRTFQDLKTILYQVDDLRLLDPATYLSPFLEVIRSKETTGPVTNLALSAVHKFMSYGLIDPAHPSVPATVEDIADAVTHARFVGTDHSSDGVVLMKILQVLRTLMLSPEGAMLTDESVCEIMLSCFRICFETRLTELLRRFAEQCLRDMTQLVFSRLAHFPPEPGAATDFSTVGSLSLKKREKTTKKKSASALSSPVADRKGAGGGRGSPAAAPADHAEPDRTDPLQRLQDKNLINEAEITIEPVESAPASTKHARHSSMDLAAENSTITQLLEKCVAGESHSDSQPDSRPDPDSQPDSRPDPDSQPDSQTDAPQELDRTTAEGDGATGSKADHDAEAAEEFVNHRGIRFTPQHDTVTLRPYGAPCIRELFRFLITLCNPLDEQNTSAMVQLGLSLVGTALEVGVDQIARCPSLLQLVKDPLCRNLLSLLSTERISIFALDLQVTFLLYEALRFHLKYQIEAFFKKIIEIVSADTSKSIYELKEIQLLAVESVVQLFRIPGFCAELYLNYDCDIYCANIFEDLIKLLSTNVLSSAAHNIHAPSTEALLAVMETVEVGIRLADAQPGQDAPPGQDAPPGQDAPSRSDAPPRPRAHVSLELGGLDDVTLAPRDPLPTDAELDNIRNLKKWVRQGTELFNQKPERGIQFLQEHGVLATPLDPHEVAMFLRENPDLDKKMIGEYICKRSSRGESAEHCGDTSVLGAFADSFEFGGLRIEQALRLYLETFRLPGEAPLIFLVMEKFAERWHSTNGCPFANTDAAFRLAYAVIMLNMDQHNHNAKKLNVPMTVEDFVRNLRGCNGSGDFDQAMLEQVYYSIKNEEMVMPAERVGPVRDAYLWRVLQRRAPRYRALPPAHPYAARVHAALAPPAVAALSAAFEREPAARSLAALERCGALLARLPVDELTLDSLVLTLVKFTGLLQHQSSSYIAIGVSLGQSARSQLALGGACGMVARHGGALRAAWEHVLRAVGALYRGRLLPQSMVEAEDYLSPDGKVSLLPETARGPESGLLSSLYSYIALGETGMRAPTPHERALMDAAAKCVAACNLPALLVTETKFLPLDSLQALVDAMVTVGAPPDAESLQLNPELEDMAVFFLELLGQTLIQNRDRAARVWAAAAGAQAAALRWAAARGGGRAARRVLCAVLRCAARLMRAELCAAAVLQHLALLFTLPQDVFHRHADVISCGLHEVVRTSAQNVHGGAEWQLVLALLCAAGAGVWPADSAALDLSSRSGSEEEAADHELSQSPHAHGWILVEREADPPARADPAVLQRCVETLALVVRDLAHVTPYNCRATVAALRIVARAAMRHGQEKSRDDIKSRSGSSRTRDDSSDEETEDVDQYHLISIQVLDLMHTLHSRTAQIFAWWRDEAEQRGPADHDLWDIAWSPLLQAIALFCTDRRKQVSRCAMRYLQRALLAPGLSSMGGEAWEACFYSVLFPLLGGLGRRPDAAARANTLTCKVLLQHLAALACRPTFSRLWTRMLHVQRSLLQTQHDALAEAALESLKNVILVMDSVHIFRNEEGYNELWFMTWEVIGEFLPTLKQDMFPDVPDDVKLPTNPLSHMQSLPASLPTIVPPTSSRDPVQVLPAQSPVCGPKSPPAAAAPPVSGMVPIRNPLYDQMGLTSSVLLQPLNEMISTPIGASSEPPPARPAPPPARPAPPPARPAPPPARPAPPPARPPHSLLLDMGDQCSLYAEYLSDPYTEAAPSDRKSCSESASPLRTNKTQFSSTDNVREDSATFTFSTYFGSSHETCGSDTFDALLTADRN

Uniprot

A0A194QGD4   A0A1Y1LVG6   D6WW16   A0A1Y1LTV6   A0A0Q5W285   A0A0N8P043   + More
B3NS41   A0A0P8YAH0   B3MCA6   A0A0B4K7N0   A1Z8W9   A1Z8W8   A0A1Q3FBP6   A0A1Q3FER2   A0A1Q3FES7   B4MY66   A0A3B0J239   U4UNW9   A0A1B6C7R4   A0A1B6ECY1   A0A1B6EGB1   A0A0R3NS53   A0A1Q3FES1   A0A1Q3FF13   A0A1Q3FF24   Q292D9   B0W2G3   A0A336L697   B4GDN7  

Pubmed

26354079    28004739    18362917    19820115    17994087    10731132    + More
12537568    12537572    12537573    12537574    16110336    17569856    17569867    23537049    15632085   

EMBL

KQ459232    KPJ02511.1    GEZM01051372    JAV75007.1    KQ971361    EFA08203.1    + More
GEZM01051373    JAV75006.1    CH954179    KQS62847.1    CH902619    KPU76084.1    EDV56343.1    KPU76083.1    EDV36206.1    AE013599    AFH08032.1    AAM68666.1    AAF58532.2    GFDL01010065    JAV24980.1    GFDL01009005    JAV26040.1    GFDL01009000    JAV26045.1    CH963894    EDW77055.2    OUUW01000001    SPP75135.1    KB632382    ERL94183.1    GEDC01028018    JAS09280.1    GEDC01001502    JAS35796.1    GEDC01023981    GEDC01000367    JAS13317.1    JAS36931.1    CM000071    KRT01696.1    GFDL01008996    JAV26049.1    GFDL01008898    JAV26147.1    GFDL01008895    JAV26150.1    EAL24923.1    DS231826    EDS28709.1    UFQS01001748    UFQT01001748    SSX12193.1    SSX31645.1    CH479181    EDW31694.1   

Proteomes

UP000053268    UP000007266    UP000008711    UP000007801    UP000000803    UP000007798    + More
UP000268350    UP000030742    UP000001819    UP000002320    UP000008744   

PRIDE

A1Z8W9    A1Z8W8   

Pfam

PF01369   Sec7        + More
PF12783   Sec7_N

Interpro

IPR000904   Sec7_dom        + More
IPR032691   Sec7_N       
IPR023394   Sec7_C_sf       
IPR035999   Sec7_dom_sf       
IPR016024   ARM-type_fold       

SUPFAM

SSF48425   SSF48425        + More
SSF48371   SSF48371       

Gene 3D

1.10.1000.11    

CDD

cd00171  Sec7

ProteinModelPortal

A0A194QGD4   A0A1Y1LVG6   D6WW16   A0A1Y1LTV6   A0A0Q5W285   A0A0N8P043   + More
B3NS41   A0A0P8YAH0   B3MCA6   A0A0B4K7N0   A1Z8W9   A1Z8W8   A0A1Q3FBP6   A0A1Q3FER2   A0A1Q3FES7   B4MY66   A0A3B0J239   U4UNW9   A0A1B6C7R4   A0A1B6ECY1   A0A1B6EGB1   A0A0R3NS53   A0A1Q3FES1   A0A1Q3FF13   A0A1Q3FF24   Q292D9   B0W2G3   A0A336L697   B4GDN7  

PDB

3LTL     E-value=2.89156e-31,     Score=344

KEGG

101745658    K18443 golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 | (RefSeq) golgi-s

PATHWAY

04144    Endocytosis - Bombyx mori (domestic silkworm)

GO

GO:0032012   GO:0005086   GO:0000902   GO:0017137   GO:0000137   GO:0035158   GO:0009306   GO:0007431   GO:0007030   GO:0043087   GO:0002064   GO:0035149   GO:0005801   GO:0032940   GO:0016020   GO:0004888   GO:0007016   GO:0005856   GO:0007155   GO:0051015   GO:0003779   GO:0016021  

Length:

1804

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0619799999999999

Exp number, first 60 AAs:

0.00832

Total prob of N-in:

0.00048

outside

1  -  1804

 

 

Pi

253.371491

Theta

217.724725

Tajima's D

0.051437

CLR

1.571573

CSRT

0.379181040947953

Interpretation

Uncertain