Gene

KWMTBOMO01015  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002359

Annotation

Zinc_finger_DNA_binding_protein_[Operophtera_brumata]

Location

Bomo_Chr3(+):27806-28736      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.054

CDS

ATGGAATCGATCAGCGGGCAAGTGACCTTGGAGAGCATAGGGCAGCTTCTCGGTATGAAACTAGCGCCTGGCTCTTCGTTCATGACTCATTTGCGATCCTCGCTTAGGAAGGATATCACAGAAATGGTGTCTAAGGAGGTTAATCGTGCTGTTGAGGGCTTGAGAGTGGATTTCTCGCAAACGACGGATTTCATGTCTGCTGAGCAGAAAAGTATCCGATCCAAAATTTGTGATAAGGAAAAAGAAATCGAGTTACTCAGACTACAACTTAATAAAACCGGGGAATCTTTACACAGGCTTCAGAATCGAGTTTCTATGGTGGAGAAAATTTCTCGAGACCTCAATATTGAGATTCACGAAGTTCCGGAGAATAATCATGAGAACCTTAATCACTTATTTAAAAAACTTTGTGAGTGTTTGAGTGTCAACATATCTGATGCAGATATCAAATCTTGTCGTCGAGTTGCTAAAATGAATCCTGACTCGAGAAGGCCAAGAAATATACTAATCTCACTGTCATCCCAGCGTCTTCGTGATGAGGTTCTATCTGCGGTTACTAGGTATAACAAGTCTAATTCAAAAGATAAGCTTGGAACCGCTCACGTCGGCTTAACATGCGAGGTTTCAAGGATTTATGTATCTGAGCATCTTTCTCCTGAGGCTAAGGAACTTCATAGCATGGCTAGAAAACTGAGCAAAGAGAAAAATTATAAATTTGTTTGGGTTCGTTTTGGTCAAATTTATATTCGAAAGGACGAGAAATGTCCCGCAGTTCATATTAAAAATATTGAAATTATTAATAAACTGAGAAACGAGTAA

Protein

MESISGQVTLESIGQLLGMKLAPGSSFMTHLRSSLRKDITEMVSKEVNRAVEGLRVDFSQTTDFMSAEQKSIRSKICDKEKEIELLRLQLNKTGESLHRLQNRVSMVEKISRDLNIEIHEVPENNHENLNHLFKKLCECLSVNISDADIKSCRRVAKMNPDSRRPRNILISLSSQRLRDEVLSAVTRYNKSNSKDKLGTAHVGLTCEVSRIYVSEHLSPEAKELHSMARKLSKEKNYKFVWVRFGQIYIRKDEKCPAVHIKNIEIINKLRNE

Similarity

Belongs to the mitochondrial carrier (TC 2.A.29) family.

Uniprot

A0A0L7K2U8   A0A0L7LTI6   A0A0L7K1T2   H9J507   A0A2A4IUX2   A0A194Q9C4   + More
A0A2A4K1S6   A0A194QEB0   A0A2H1W956   A0A2A4IXU4   A0A2A4JD60   A0A0L7L0X6   A0A0L7K3N5   A0A2A4JC78   A0A2H1VP34   A0A0L7L1J8   A0A0L7LEU2   A0A2A4IUU8   A0A0L7LEV4   A0A2H1W117   A0A2H1VD37   A0A0L7K4I6   A0A0L7L3E9   A0A212EWC1   A0A2H1VAR2   A0A2A4IU35   A0A2H1VRS8   A0A0L7KQ92   A0A0L7K4K4   A0A0L7K3E6   A0A0L7KN20   A0A2A4J0C3   A0A2A4JBL7   A0A2H1W5G4   A0A2W1BYU6   A0A0L7KTU7   A0A2W1BT87   A0A0L7LT36   A0A2A4IYB9   A0A2A4IYL3   A0A2H1WYV3   A0A2H1VJZ0   A0A2H1V7J6   A0A0L7KQY0   A0A2H1X1K9   A0A0L7K2E3   A0A0L7LF48   A0A0L7L7A2   A0A0L7KY55   A0A1S3DH78   A0A2H1V922   A0A2W1BXY4   A0A2A4IYM6   A0A0L7LG83   A0A0L7KV77   A0A0L7KMZ2   A0A1S4ENY8   A0A1S3DCU0   A0A0L7LLD5   A0A0L7LQ84   A0A2A4IX07   A0A2A4IX81   A0A0L7LU57   A0A1Y1JXQ1   A0A2A4JSX1   A0A0L7LIN9   A0A1E1W9J6   A0A0L7L1P7   A0A0L7L3D0   A0A0L7KYP3  

Pubmed

26227816    19121390    26354079    22118469    28756777    28004739    + More

EMBL

JTDY01013334    JTDY01001687    KOB52155.1    KOB73157.1    JTDY01000136    KOB78669.1    + More
JTDY01018098    KOB51825.1    BABH01025786    NWSH01006948    PCG63178.1    KQ459252    KPJ02103.1    NWSH01000267    PCG77878.1    KQ459054    KPJ03878.1    ODYU01007128    SOQ49629.1    NWSH01005418    PCG64228.1    NWSH01001819    PCG70025.1    JTDY01003733    KOB69075.1    JTDY01012405    KOB52279.1    NWSH01002032    PCG69366.1    ODYU01003592    SOQ42557.1    JTDY01003535    KOB69383.1    JTDY01001361    KOB74078.1    NWSH01007173    PCG63054.1    JTDY01001411    KOB73935.1    ODYU01005672    SOQ46768.1    ODYU01001881    SOQ38706.1    JTDY01010989    KOB57786.1    JTDY01003264    KOB69846.1    AGBW02012032    OWR45776.1    ODYU01001557    SOQ37940.1    NWSH01007563    PCG62908.1    ODYU01004037    SOQ43507.1    JTDY01007401    KOB65231.1    KOB57787.1    JTDY01014577    KOB52017.1    JTDY01008545    KOB64520.1    NWSH01004587    PCG64890.1    NWSH01002191    PCG68944.1    ODYU01006462    SOQ48321.1    KZ149914    PZC78000.1    JTDY01005854    KOB66545.1    KZ150018    PZC74943.1    JTDY01000141    KOB78628.1    NWSH01005479    PCG64170.1    NWSH01005393    PCG64252.1    ODYU01012049    SOQ58146.1    ODYU01002971    SOQ41143.1    ODYU01001084    SOQ36825.1    JTDY01006800    KOB65678.1    ODYU01012701    SOQ59142.1    JTDY01015045    KOB51976.1    JTDY01001455    KOB73826.1    JTDY01006475    JTDY01002579    KOB65982.1    KOB71161.1    JTDY01004426    KOB68173.1    ODYU01001291    SOQ37301.1    KZ149923    PZC77680.1    NWSH01004492    PCG65047.1    JTDY01001253    KOB74394.1    JTDY01005410    KOB67040.1    JTDY01008292    KOB64643.1    JTDY01000684    KOB76235.1    JTDY01000399    KOB77361.1    NWSH01006037    PCG63722.1    PCG63723.1    JTDY01000093    KOB78914.1    GEZM01097808    JAV54094.1    NWSH01000633    PCG75137.1    JTDY01000920    KOB75433.1    GDQN01007376    JAT83678.1    JTDY01003553    KOB69355.1    JTDY01003222    KOB69925.1    JTDY01004454    KOB68144.1   

Proteomes

UP000037510    UP000005204    UP000218220    UP000053268    UP000007151    UP000079169    + More

PRIDE

H9J507   

Pfam

PF03258   Baculo_FP        + More
PF00628   PHD
PF00153   Mito_carr
PF00005   ABC_tran
PF14529   Exo_endo_phos_2
PF04869   Uso1_p115_head
PF18770   Arm_vescicular

Interpro

IPR004941   Baculo_FP        + More
IPR004244   Transposase_22       
IPR011011   Znf_FYVE_PHD       
IPR019787   Znf_PHD-finger       
IPR013083   Znf_RING/FYVE/PHD       
IPR001965   Znf_PHD       
IPR019786   Zinc_finger_PHD-type_CS       
IPR002067   Mit_carrier       
IPR018108   Mitochondrial_sb/sol_carrier       
IPR023395   Mt_carrier_dom_sf       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR003593   AAA+_ATPase       
IPR026082   ABCA       
IPR003439   ABC_transporter-like       
IPR027417   P-loop_NTPase       
IPR001841   Znf_RING       
IPR005135   Endo/exonuclease/phosphatase       
IPR016024   ARM-type_fold       
IPR041209   P115_Arm_rpt       
IPR006953   Vesicle_Uso1_P115_head       
IPR011989   ARM-like       

SUPFAM

SSF57903   SSF57903        + More
SSF103506   SSF103506       
SSF56219   SSF56219       
SSF52540   SSF52540       
SSF48371   SSF48371       

Gene 3D

3.30.40.10     1.50.40.10     3.60.10.10     1.25.10.10    

ProteinModelPortal

A0A0L7K2U8   A0A0L7LTI6   A0A0L7K1T2   H9J507   A0A2A4IUX2   A0A194Q9C4   + More
A0A2A4K1S6   A0A194QEB0   A0A2H1W956   A0A2A4IXU4   A0A2A4JD60   A0A0L7L0X6   A0A0L7K3N5   A0A2A4JC78   A0A2H1VP34   A0A0L7L1J8   A0A0L7LEU2   A0A2A4IUU8   A0A0L7LEV4   A0A2H1W117   A0A2H1VD37   A0A0L7K4I6   A0A0L7L3E9   A0A212EWC1   A0A2H1VAR2   A0A2A4IU35   A0A2H1VRS8   A0A0L7KQ92   A0A0L7K4K4   A0A0L7K3E6   A0A0L7KN20   A0A2A4J0C3   A0A2A4JBL7   A0A2H1W5G4   A0A2W1BYU6   A0A0L7KTU7   A0A2W1BT87   A0A0L7LT36   A0A2A4IYB9   A0A2A4IYL3   A0A2H1WYV3   A0A2H1VJZ0   A0A2H1V7J6   A0A0L7KQY0   A0A2H1X1K9   A0A0L7K2E3   A0A0L7LF48   A0A0L7L7A2   A0A0L7KY55   A0A1S3DH78   A0A2H1V922   A0A2W1BXY4   A0A2A4IYM6   A0A0L7LG83   A0A0L7KV77   A0A0L7KMZ2   A0A1S4ENY8   A0A1S3DCU0   A0A0L7LLD5   A0A0L7LQ84   A0A2A4IX07   A0A2A4IX81   A0A0L7LU57   A0A1Y1JXQ1   A0A2A4JSX1   A0A0L7LIN9   A0A1E1W9J6   A0A0L7L1P7   A0A0L7L3D0   A0A0L7KYP3  

KEGG

NA   

GO

GO:0046872   GO:0016021   GO:0022857   GO:0042626   GO:0005524   GO:0048280   GO:0000139   GO:0006886  

PANTHER

PTHR11505   PTHR19229  

Length:

272

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01852

Exp number, first 60 AAs:

0.01834

Total prob of N-in:

0.02140

outside

1  -  272

 

 

Pi

501.156274

Theta

247.678336

Tajima's D

3.223815

CLR

0.857434

CSRT

0.987400629968502

Interpretation

Uncertain