SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01011  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA014469
Annotation
PREDICTED:_uncharacterized_protein_LOC101738727_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 3.695
 

Sequence

CDS
ATGCTTGGTGTTGGCGAGCTTGCGTCGCTGTGCCGCGGGGCCACTGACGTTATGTCAATCTTTTTTGTAAGGGTCGTTGTAGGCGATCTGCTGGGCGCACCCGGGGGTGAAGCTATCAACATGGCTGTTAAATTTCTGAGCAGGCTGTTCTTGTTATTCGCCACAGCGCACTGCGCCGCCGACAACATCCTCCGATCTCCGCGGCAGTCTCCGGGGAGTATATTCACTGTCGGGAACGGGGAGCAGTGCCTGGGCTCCGACAGATCCACCGGGGGCGTGTGCCTCTCGCGCAACCAGTGCAACACGCAGGGAGGGAAGGCCATCGGATTCTGCGGAGTGTTCGCCACTTGCTGCGCGCTGAACGCGTGCGATGTGCGGACCAACACTAAGGTGGCAGTCTTCATCAACCCTCCGCTGAACAGGGAGTCTTCGGGTCTGGAGTGCTCTTACAACGTGGAAATAAACAACAACAACGTGTGCCAGATGAGGATAGACTTCGAGACCTTCAACCTCGCGCCGCCGACGACGGTAGAGTCAGTGGAGAACGTCACCCAGCGCCCAGGCTACACCTGCAGGAACGACATCTTCCAAGTGACAAACCTGCAGGCCAACTCCGATCTGTTGCCGGCACTCTGCGGCGACAACAACGGGCAGCACATGTACATCCGAGTGAACGCGTCCACGAACAGCCGATCGATCCGCATCAACTTCAAGATAGCGGACCGCAACACGCAGCCGAACCTCCCGCAGGCCACCTGGAAGATCAAGGTCACGCAGCTCGAGTGCTTCAACACTCTCGGCAAGTACCGCGACGGCATCCTGGAGGCCATCACGTCGTCGCTGCCCTCCACCCCGTTCACGTCCTCCGCCGACCGGGACGAGTATCTCATCGCTCCCCCCGGCTGCCTGCAGTACTTCCCGGACCGGTCGGGCTCGTTCGAGTCGTTCAACTACAACCGCGGCGCGGGGCCCTACATCGCGAACCTGGCCTACGCGACCTGCTTCAAGCGACCCTCCGACGTTTGCGGCGTCAAGATAACGTCGGCGAGCTTCGAACTGGCGTACCGGGACTCCGAGAACCTGTACTTGGACACGGACTGCCAGATCAACCCGGTCACCCAGGGCGTGGCGCAGTCCGAGGACTACCTGTTCATCCCGGAGGCCGAGACCGCTGACGGGCTGCGTGGCACTAAGTTCTGTGGCAGCAGCGCAGCCGACCAGATCGTAGCTTCGATCCCGCCGGGCCCCCTGTACGTGCACTTCCACAGCGACAACCTGGTGACGGACGGCGTCCCGGAGTCAGGGTACAGGTTCAACTACAACGTGCTCAACAACTGCTACCTCAAGTAG
Protein
MLGVGELASLCRGATDVMSIFFVRVVVGDLLGAPGGEAINMAVKFLSRLFLLFATAHCAADNILRSPRQSPGSIFTVGNGEQCLGSDRSTGGVCLSRNQCNTQGGKAIGFCGVFATCCALNACDVRTNTKVAVFINPPLNRESSGLECSYNVEINNNNVCQMRIDFETFNLAPPTTVESVENVTQRPGYTCRNDIFQVTNLQANSDLLPALCGDNNGQHMYIRVNASTNSRSIRINFKIADRNTQPNLPQATWKIKVTQLECFNTLGKYRDGILEAITSSLPSTPFTSSADRDEYLIAPPGCLQYFPDRSGSFESFNYNRGAGPYIANLAYATCFKRPSDVCGVKITSASFELAYRDSENLYLDTDCQINPVTQGVAQSEDYLFIPEAETADGLRGTKFCGSSAADQIVASIPPGPLYVHFHSDNLVTDGVPESGYRFNYNVLNNCYLK

Summary

EMBL
BABH01042097    KQ460296    KPJ16288.1    KQ459593    KPI96669.1    AGBW02012166    + More
OWR45549.1    KZ150216    PZC72137.1    NWSH01002724    NWSH01001596    PCG67620.1    PCG70758.1    GGMR01012796    MBY25415.1    AAAB01008980    EAA14478.4    APCN01001764    ABLF02014153    AJWK01013585    AXCN02000686    CH477681    EAT37302.1    JXUM01018719    JXUM01018720    JXUM01018721    JXUM01018722    JXUM01018723    KQ560520    KXJ82008.1    DS235271    EEB14167.1    CH916367    EDW01767.1    CP012524    ALC41128.1    GBXI01005466    JAD08826.1    EDW01768.1    CAQQ02035503    CH940648    EDW59909.1    CH933808    EDW08661.1    EDW59908.1    CH902619    EDV37891.1    CVRI01000067    CRL06773.1    CM000362    CM002911    EDX06915.1    KMY93469.1    CH480816    EDW47711.1    AE013599    BT133127    AAF58386.1    AEY64295.1    CH964154    EDW79805.2    CM000158    EDW90627.1    JRES01001210    KNC24566.1    CH954179    EDV56176.1    EDW08662.1    KQ971354    KYB26501.1    NEVH01013255    PNF29240.1    CCAG010002863    OUUW01000001    SPP73912.1    KK853050    KDR12057.1    CM000071    EAL24696.2    CH479181    EDW31363.1    GDHF01008904    JAI43410.1    GAKP01005843    JAC53109.1    MUJZ01017583    OTF80578.1    KMY93470.1    KK112776    KFM58531.1    JXJN01013596    GBHO01031434    GBHO01005278    GBHO01005276    JAG12170.1    JAG38326.1    JAG38328.1    CAEY01000889    CAEY01001817   
Pfam
PF00431   CUB
Interpro
IPR000859   CUB_dom        + More
IPR035914   Sperma_CUB_dom_sf       
SUPFAM
SSF49854   SSF49854       
Gene 3D

Ontologies

GO

Topology

Length:
449
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
6.10569999999999
Exp number, first 60 AAs:
6.08626
Total prob of N-in:
0.26511
outside
1  -  449
 
 

Population Genetic Test Statistics

Pi
257.777365
Theta
206.236719
Tajima's D
0.759202
CLR
0.000937
CSRT
0.593670316484176
Interpretation
Uncertain
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