Silkworm Genome Informatics Database

Gene

KWMTBOMO01006

Pre Gene Modal

BGIBMGA001381

Annotation

PREDICTED:_uncharacterized_protein_LOC106101399_[Papilio_polytes]

Location

Bomo_Chr2(+):8301992-8304328 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 2.21

CDS

ATGGAAGACGTGTATACTATTAAAGTCAAAACAAAGCCAGATACGCGTAACTTGTATCCGTCGGAGCGCCGCTACTCCGCCTCCACGGTGTCGGGGCTGGCCTGGGTCCACATCGCGCTCTCCGCCACCTCGTTCCTGCTGGCGTGTCTGGCCTTGGTCAACCCGGACGAGGGAAAACAACCTAATAACACAACAGAGTCCCTGAACTCAATCAACGGCACAGCCAATTCTTCGTTCGTCGCGGACAATGGGTACATGCTGGTGCTGGCGCCGAGCTTGCTCAGCGTGTTCGGCCTGGCGGCGGGCGTCGCCAGCATCATGGCGTCCGTGAAGTGGTACATAGACCACAACATCACCTGGCTATTCATAGCCTCGGTTATGTCCACTGTAGTGTCCTTGGCATCGTTTGTAATGGTGGCGGTGTGGTTCGCCTCCACGTCTGAAGGAGAAATAACAGACTTTTATAAAGATAAAGTACCTTTCAAAGATTTCGTGGTCGTGAGACAGGCAGATGTGTATGAGCATAACTCTTCACACGTTATAGTGGCTTTAAACTCCACTAAGGTGAGCGAGGAGAGTCAAGGATCACGAGTGTTCACGACGGGAGTACTCTCCATCAACATCCTCATAGCCGCCTTCCTCGAAGTGCTTTGGTCGATCCTGAGCGTCAAGATATCATATAGAGGCATGCGAAACAATTACAAAGACGACAGCAGCGAGCCAAGAGGAAAGTGCATATCTGTTGTCACCAAGATAAAAGGAAACGATCCTAAACACATCCCTCGGAATGGAAAATTGCTGAAACCAAAACCGGACCTCATAGAACATTATCCCAATAAGAAGATCAAAAAGATATACCTCGCTCAAGACGAAAACGGGTTCTATTTGAAGAACCAAAACAACAAAGTGAAGCAAAACACGGAGACTAGCTCTGAGATATATAAGGAGAGGATGATGAACTTCCTCAACCGCTGCGCCTCTCTCGAGGGCGTCTCCAACCCGGAGGCAACTCCGAGCGTTCACTCAGACGCACTGAACACTATCCCGGAAGTTGCCAGCGCTGAAATTAACCTAGAAAATGAACGCAAAGCCACAACGAGCCCGCTCAGCTGGGGAGACACTCCCGACCACACCGTGTACAATCAGAACACGCTGAACTTAGAAAATATATTTAATTTTACGAAGAAAGTGGATGCGAAAAACGAAGAGCCAAGTGAAAACGACAATCTGTAG

Protein

MEDVYTIKVKTKPDTRNLYPSERRYSASTVSGLAWVHIALSATSFLLACLALVNPDEGKQPNNTTESLNSINGTANSSFVADNGYMLVLAPSLLSVFGLAAGVASIMASVKWYIDHNITWLFIASVMSTVVSLASFVMVAVWFASTSEGEITDFYKDKVPFKDFVVVRQADVYEHNSSHVIVALNSTKVSEESQGSRVFTTGVLSINILIAAFLEVLWSILSVKISYRGMRNNYKDDSSEPRGKCISVVTKIKGNDPKHIPRNGKLLKPKPDLIEHYPNKKIKKIYLAQDENGFYLKNQNNKVKQNTETSSEIYKERMMNFLNRCASLEGVSNPEATPSVHSDALNTIPEVASAEINLENERKATTSPLSWGDTPDHTVYNQNTLNLENIFNFTKKVDAKNEEPSENDNL

Uniprot

H9IVV0 A0A194PUL6 A0A2W1BEI5 A0A0N0PD93 A0A0L7LK78 A0A2H1VZY0 + More
A0A1E1WCA7 A0A212FDZ8 A0A2A4J0E6 A0A1Y1NC64 D6WTL1 A0A1W4WV19 A0A146KUH5 A0A0A9Z4D4 N6ULB5 A0A023F697 T1IDX0

Pubmed

19121390 26354079 28756777 26227816 22118469 28004739 + More
18362917 19820115 26823975 25401762 23537049 25474469

EMBL

BABH01038101 KQ459593 KPI96673.1 KZ150216 PZC72134.1 KQ460296 + More
KPJ16291.1 JTDY01000873 KOB75596.1 ODYU01005482 SOQ46378.1 GDQN01006448 JAT84606.1 AGBW02008983 OWR51979.1 NWSH01004335 PCG65216.1 GEZM01012100 JAV93207.1 KQ971354 EFA07196.1 GDHC01018671 JAP99957.1 GBHO01006954 JAG36650.1 APGK01028669 KB740694 ENN79487.1 GBBI01001977 JAC16735.1 ACPB03002174

Proteomes

UP000005204 UP000053268 UP000053240 UP000037510 UP000007151 UP000218220 + More
UP000007266 UP000192223 UP000019118 UP000015103

PRIDE

H9IVV0

Pfam

PF04654 DUF599

Interpro

IPR006747 DUF599

ProteinModelPortal

H9IVV0 A0A194PUL6 A0A2W1BEI5 A0A0N0PD93 A0A0L7LK78 A0A2H1VZY0 + More
A0A1E1WCA7 A0A212FDZ8 A0A2A4J0E6 A0A1Y1NC64 D6WTL1 A0A1W4WV19 A0A146KUH5 A0A0A9Z4D4 N6ULB5 A0A023F697 T1IDX0

KEGG

101736478 no KO assigned | (RefSeq) uncharacterized LOC101736478

GO

GO:0016021

Length:

410

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

90.9007599999999

Exp number, first 60 AAs:

22.53578

Total prob of N-in:

0.99204

POSSIBLE N-term signal

sequence

inside

1 - 32

TMhelix

33 - 55

outside

56 - 84

TMhelix

85 - 107

inside

108 - 119

TMhelix

120 - 142

outside

143 - 198

TMhelix

199 - 221

inside

222 - 410

Pi

337.06476

Theta

225.583757

Tajima's D

1.513815

CLR

0

CSRT

0.788860556972151

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics