Silkworm Genome Informatics Database

Gene

KWMTBOMO00996

Pre Gene Modal

BGIBMGA013783

Annotation

AF461149_1_transposase_[Bombyx_mori]

Location

Bomo_Chr2(+):8174922-8176163 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.345 Nuclear Reliability : 1.887

CDS

ATGGAATGGACGCTTAAAGAAGACCGTGTTGCAGTTATTGCGTTGCATCGTTGCGGTTACGCGCCAATTCAAATTTTTAACATACTGAAAAATTTTAATATAACCAAAAGATTCGTTTATCGTACCATCAAACGATACAATGAAGACTCTAGTGTAGATGACAGGTCAAGAAGTGGTCTCCCTCGGTCTGTTAGGACTCCAGCAGTGATAAAAGCTGTGAAGGCGCGAATTCAAAGAAATCCCAAACAAGAGAGCTACAACAAACAAAATGATAAGGTGTACGCACACAGTAGTGAAGAAGCGAGCAACCGCGTTCCGCCTGTCCAACGAGGTCATTTTCCATCCTCGCTCATGGTATGGTTGGGAGTTTCTTATTGGGGCTTAACAGAGGTACATTTTTGTGAGAAAGGTGTAAAAACGAATGCAGTTGTGTATCAAAATACAGTCCTGACGAACCTTGTGGAACCTGTTTCTCATACCATGTTCAATAACAGGCACTGGGTATTCCAACAAGATTCGGCGCCAGCTCATAGAGCGCAGAGGACACAAGACTGGCTGGCGGCGCGTGAAATCGACTTCATCCGGCATGAAGACTGGCCCTCCTCCAGTCCAGATATGAATCCGTTAGATTACAAGATATGGCAACACTTGGAGGAAAAGGCGTGCTCAAAGCCTCATCCCAATTTGGAGTCACTCAAGACATCCTTGATTAAGGCAGCCGCCGATATTGACATGGACCTCGTTCGTGCTGCGATAGACGACTGGCCGCGCAGATTGAAGGCCTGTATTCAAAATCACGGAGGTCATTTTGAATAA

Protein

MEWTLKEDRVAVIALHRCGYAPIQIFNILKNFNITKRFVYRTIKRYNEDSSVDDRSRSGLPRSVRTPAVIKAVKARIQRNPKQESYNKQNDKVYAHSSEEASNRVPPVQRGHFPSSLMVWLGVSYWGLTEVHFCEKGVKTNAVVYQNTVLTNLVEPVSHTMFNNRHWVFQQDSAPAHRAQRTQDWLAAREIDFIRHEDWPSSSPDMNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHGGHFE

Uniprot

A0A0C2GWR6 E3M065 E3ND45 A0A183FT12 A0A3P7ZBK4 H3EZH8 + More
E3N6E8 A0A2G5TSG2 A0A2G5VIT1 A0A1I7TL85 A0A1L5BY18 A0A226DSX5 A0A0K9NHE3 A8WW91

Pubmed

18806794 25527032 26814964 14624247

EMBL

KN728607 KIH63514.1 DS268420 EFO87874.1 DS268606 EFO93488.1 + More
UZAH01027002 VDO87649.1 DS268539 EFO88027.1 PDUG01000005 PIC29926.1 PDUG01000001 PIC51673.1 KX931010 APL98300.1 LNIX01000012 OXA47934.1 LFYR01002220 KMZ56176.1 HE600956 CAP24900.1

Proteomes

UP000008281 UP000050761 UP000005239 UP000230233 UP000095282 UP000198287 + More
UP000036987 UP000008549

Pfam

PF13358 DDE_3 + More
PF00292 PAX

Interpro

IPR036388   WH-like_DNA-bd_sf        + More
IPR009057   Homeobox-like_sf
IPR038717   Tc1-like_DDE_dom
IPR001523   Paired_dom

SUPFAM

SSF46689 SSF46689

Gene 3D

1.10.10.10

ProteinModelPortal

A0A0C2GWR6 E3M065 E3ND45 A0A183FT12 A0A3P7ZBK4 H3EZH8 + More
E3N6E8 A0A2G5TSG2 A0A2G5VIT1 A0A1I7TL85 A0A1L5BY18 A0A226DSX5 A0A0K9NHE3 A8WW91

PDB

5CR4 E-value=6.65657e-09, Score=143

KEGG

101740752 no KO assigned | (RefSeq) aldo-keto reductase AKR2E4-like

GO

GO:0003677 GO:0006355 GO:0032222 GO:0051015 GO:0005925 GO:0007016 GO:0005856 GO:0007155 GO:0003779 GO:0016021

Length:

271

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.30413

Exp number, first 60 AAs:

1.22901

Total prob of N-in:

0.08515

outside

1 - 271

Pi

117.828854

Theta

77.285453

Tajima's D

0.952494

CLR

0.002446

CSRT

0.650817459127044

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree