Gene

KWMTBOMO00994  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001348

Annotation

PREDICTED:_F-box/LRR-repeat_protein_20_[Papilio_xuthus]

Location

Bomo_Chr2(-):8148584-8163121      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.543

CDS

ATGACGCATTCTGGGAGGAGTAAATTCGAGATAACTCGTTTTACGAACGAAGATGAGAACCACATCAACAGGAAACTGCCCAAGGAGCTGCTGCTGAGGATACTGTCGTACTTAGACGTGGTGTCGCTGTGCAGATGTGCGCAGGTCTCCAAGCTGTGGAACATTCTGGCGCTGGACGGCTCCAACTGGCAACGAATAGATTTGTTCGAGTTTCAGAGGGACGTAGAGGGTCCGGTCATAGAGAACATATCGCAGCGGTGCGGCGGGTTCCTCCGGCAGCTGTCCCTCAGGGGCTGCGAGAGCATCGGCGACGGCTCCATGAAGACGCTGGCGCAGTCGTGTCCGAACATTGAAGATCTGAACCTGAACAAATGCAAGAAGATAACGGACCAGACGTGCCAGGCGCTGGGCAGGAGGTGCAGCAAACTGCAGAAAATAAATTTGGACTCGTGCCCCAGCGTGTCGGACATCTCTCTGAAGGCGCTGGCCGACGGCTGCCCTTTGCTGACACACGTGAACGTGTCGTGGTGCCAGTCCATAACGGAGAGCGGCGTGGAGGCGCTGGCCCGGGGCTGCCCCAAGCTCAAGAGCTTCATTTGTAAAGGATGCAAGAACGTCAACGACCGCGCTGTCATCAGCCTCGCCACGCGCTGCCCCGACCTCGAGGTGCTGGACATACAGGGCTGCGAGACGGTGTCGGACGAGGCGGTGTCGCGGCTGGGCGGCGCGCTGCGGCGGCTGTGCGCGTCGGGCTGCGCGCGGCTCACGGACGCGTCGCTGGCCGCGCTGGCCGCCGCCGCGCCGCGCCTCGCCACGCTCGAGCTGGCGCAGTGCACGCAGCTCACCGACGCAGGCTTCCAGGCGCTCGCAAGGAACTGCAGGATGCTGGAGCGCATGGACTTAGAAGAGTGTGTCCTTATCACCGACGCCACCCTGGTGCACCTGTCCATGGGCTGTCCGCGACTTGAGAAACTGACGCTGTCCCACTGTGACCTGATCACGGACAACGGCATAAAGCAGCTGTCCCTGTCCCCCTGCGCCGCCGAGCACCTCACCGTGCTGGGTCTGGACAACTGTCCCCTGGTGACCGACGAGGCGCTGGAGCACCTGACGTCCTGCCACAACCTGCAGCTCATCGAGCTCTACGACTGCCAGATGGTCACGAGGAACGCCATACGGAAGCTCAGGAACCATCTTCCCAACATCAAAGTGCACGCGTACTTCGCCCCGGTGACTCCGCCCGCGGCCGCCGGCGGCGCCCGGCCCCGCTACTGCCGCTGCTGCAACATCATATGA

Protein

MTHSGRSKFEITRFTNEDENHINRKLPKELLLRILSYLDVVSLCRCAQVSKLWNILALDGSNWQRIDLFEFQRDVEGPVIENISQRCGGFLRQLSLRGCESIGDGSMKTLAQSCPNIEDLNLNKCKKITDQTCQALGRRCSKLQKINLDSCPSVSDISLKALADGCPLLTHVNVSWCQSITESGVEALARGCPKLKSFICKGCKNVNDRAVISLATRCPDLEVLDIQGCETVSDEAVSRLGGALRRLCASGCARLTDASLAALAAAAPRLATLELAQCTQLTDAGFQALARNCRMLERMDLEECVLITDATLVHLSMGCPRLEKLTLSHCDLITDNGIKQLSLSPCAAEHLTVLGLDNCPLVTDEALEHLTSCHNLQLIELYDCQMVTRNAIRKLRNHLPNIKVHAYFAPVTPPAAAGGARPRYCRCCNII

Uniprot

A0A1E1WFQ2   A0A194PT08   A0A212EKX3   A0A194QZH6   A0A2A4K2D2   A0A1Y1LT38   + More
A0A1Y1LV50   A0A2P8XL67   A0A139WHE4   A0A1B6MJR5   D6WMF2   A0A1B6DH79   A0A1B6EUJ6   A0A146LWP7   A0A1B6KVT6   K7INM3   A0A0C9QX29   A0A023F5G5   A0A0V0GAG9   A0A2H1VZD7   T1H911   A0A0A9Y771   A0A1B6EU84   A0A0A9YA79   A0A0P4VW86   A0A158N964   A0A2A3E8A6   A0A154P5E3   A0A195B4F6   E2C4H9   A0A3L8E484   A0A195CTX1   F4WIT3   A0A195FPD9   A0A151WLY0   A0A026VXP2   A0A088AGT2   A0A1B6LKJ7   U5ELL2   A0A084VDS1   A0A0L7R6S6   A0A182RVM9   A0A1Q3F5N1   A0A182TE07   A0A1S4GWA2   A0A182X1J9   A0A182L2H4   A0A182IEI0   B0WXG5   A0A182MZC9   A0A2M4BMN0   Q172D0   A0A182JZ35   A0A182XZL2   A0A0C9RSD8   A0A2M4AI82   A0A2M4CTS8   A0A182SD55   A0A1B6MJZ4   A0A182W7S5   A0A182P0E5   A0A182FN71   A0A2M3Z778   Q7Q3C3   A0A1B6JLU7   A0A182J008   A0A182M899   W5JVH0   A0A2S2P0S8   A0A1L8DAU2   J9JNE9   A0A0P5ZA17   A0A2H8TJB7   A0A232F4P2   A0A2S2PWU0   A0A182H6A0   E9G1Z9   E0VCM3   A0A1D2N5M0   A0A151IWR0   A0A1B6JY84   A0A3B0JUE8   B4LPX8   A0A182Q639   A0A0P6E6D8   A0A0J7L1K5   A0A0R3NS81   Q5BI22   A0A0B4KEK4   A0A0B4KEU4   A0A1W4UID8   Q291I1   A0A0J9RAF5   A0A0R1DQF0   A0A0Q5W2A3   A8DYA5   B4GAP3   A0A0J9RAI0   E2ADF4   A1Z8M8  

Pubmed

26354079    22118469    28004739    29403074    18362917    19820115    + More
26823975    20075255    25474469    25401762    27129103    21347285    20798317    30249741    21719571    24508170    24438588    12364791    20966253    17510324    25244985    20920257    23761445    28648823    26483478    21292972    20566863    27289101    17994087    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    17550304   

EMBL

GDQN01005224    JAT85830.1    KQ459593    KPI96447.1    AGBW02014188    OWR42129.1    + More
KQ460890    KPJ10857.1    NWSH01000243    PCG78064.1    GEZM01049038    JAV76151.1    GEZM01049039    JAV76150.1    PYGN01001799    PSN32749.1    KQ971343    KYB27304.1    GEBQ01003789    JAT36188.1    EFA03310.2    GEDC01012264    JAS25034.1    GECZ01028198    GECZ01019545    GECZ01019168    GECZ01000074    JAS41571.1    JAS50224.1    JAS50601.1    JAS69695.1    GDHC01007194    JAQ11435.1    GEBQ01024408    JAT15569.1    GBYB01000240    JAG70007.1    GBBI01002324    JAC16388.1    GECL01001002    JAP05122.1    ODYU01005396    SOQ46188.1    ACPB03019912    GBHO01015600    GBHO01015598    GBRD01015499    GDHC01006679    JAG28004.1    JAG28006.1    JAG50327.1    JAQ11950.1    GECZ01030645    GECZ01028214    GECZ01008182    JAS39124.1    JAS41555.1    JAS61587.1    GBHO01015601    GBHO01015596    GBRD01015498    GDHC01002683    GDHC01000373    JAG28003.1    JAG28008.1    JAG50328.1    JAQ15946.1    JAQ18256.1    GDKW01001641    JAI54954.1    ADTU01008734    KZ288326    PBC27987.1    KQ434822    KZC07072.1    KQ976618    KYM79152.1    GL452471    EFN77163.1    QOIP01000001    RLU27352.1    KQ977279    KYN04136.1    GL888177    EGI65879.1    KQ981382    KYN42261.1    KQ982959    KYQ48705.1    KK107602    EZA48578.1    GEBQ01015745    JAT24232.1    GANO01001355    JAB58516.1    ATLV01011730    ATLV01011731    KE524715    KFB36115.1    KQ414646    KOC66529.1    GFDL01012232    JAV22813.1    AAAB01008964    APCN01005204    DS232164    EDS36495.1    GGFJ01005198    MBW54339.1    CH477441    EAT40856.1    GBYB01010316    JAG80083.1    GGFK01007178    MBW40499.1    GGFL01004403    MBW68581.1    GEBQ01003754    JAT36223.1    GGFM01003547    MBW24298.1    EAA12920.4    GECU01007634    JAT00073.1    AXCM01014285    ADMH02000216    ETN67343.1    GGMR01010381    MBY23000.1    GFDF01010505    JAV03579.1    ABLF02011771    GDIQ01150435    GDIP01048958    LRGB01000032    JAL01291.1    JAM54757.1    KZS21231.1    GFXV01002438    MBW14243.1    NNAY01000942    OXU25806.1    GGMS01000804    MBY70007.1    JXUM01113704    KQ565716    KXJ70748.1    GL732529    EFX86579.1    DS235059    EEB11129.1    LJIJ01000198    ODN00568.1    KQ980846    KYN12261.1    GECU01003557    JAT04150.1    OUUW01000001    SPP74698.1    CH940648    EDW61318.2    AXCN02000604    GDIP01046022    GDIQ01068466    JAM57693.1    JAN26271.1    LBMM01001343    KMQ96478.1    CM000071    KRT01869.1    BT021402    AE013599    AAX33550.1    ABV53766.1    AGB93433.1    AGB93434.1    EAL25131.3    CM002911    KMY93016.1    CM000158    KRJ99509.1    CH954179    KQS62872.1    BT120055    ABV53765.1    ADA53594.1    CH479181    EDW31995.1    KMY93017.1    GL438750    EFN68516.1    AAF58635.1   

Proteomes

UP000053268    UP000007151    UP000053240    UP000218220    UP000245037    UP000007266    + More
UP000002358    UP000015103    UP000005205    UP000242457    UP000076502    UP000078540    UP000008237    UP000279307    UP000078542    UP000007755    UP000078541    UP000075809    UP000053097    UP000005203    UP000030765    UP000053825    UP000075900    UP000075902    UP000076407    UP000075882    UP000075840    UP000002320    UP000075884    UP000008820    UP000075881    UP000076408    UP000075901    UP000075920    UP000075885    UP000069272    UP000007062    UP000075880    UP000075883    UP000000673    UP000007819    UP000076858    UP000215335    UP000069940    UP000249989    UP000000305    UP000009046    UP000094527    UP000078492    UP000268350    UP000008792    UP000075886    UP000036403    UP000001819    UP000000803    UP000192221    UP000002282    UP000008711    UP000008744    UP000000311   

PRIDE

Q5BI22    A1Z8M8   

Pfam

PF13516   LRR_6        + More
PF12937   F-box-like
PF00059   Lectin_C

Interpro

IPR001810   F-box_dom        + More
IPR001611   Leu-rich_rpt       
IPR032675   LRR_dom_sf       
IPR006553   Leu-rich_rpt_Cys-con_subtyp       
IPR036047   F-box-like_dom_sf       
IPR001304   C-type_lectin-like       
IPR016186   C-type_lectin-like/link_sf       
IPR016187   CTDL_fold       

SUPFAM

SSF81383   SSF81383        + More
SSF56436   SSF56436       

Gene 3D

3.80.10.10     3.10.100.10    

ProteinModelPortal

A0A1E1WFQ2   A0A194PT08   A0A212EKX3   A0A194QZH6   A0A2A4K2D2   A0A1Y1LT38   + More
A0A1Y1LV50   A0A2P8XL67   A0A139WHE4   A0A1B6MJR5   D6WMF2   A0A1B6DH79   A0A1B6EUJ6   A0A146LWP7   A0A1B6KVT6   K7INM3   A0A0C9QX29   A0A023F5G5   A0A0V0GAG9   A0A2H1VZD7   T1H911   A0A0A9Y771   A0A1B6EU84   A0A0A9YA79   A0A0P4VW86   A0A158N964   A0A2A3E8A6   A0A154P5E3   A0A195B4F6   E2C4H9   A0A3L8E484   A0A195CTX1   F4WIT3   A0A195FPD9   A0A151WLY0   A0A026VXP2   A0A088AGT2   A0A1B6LKJ7   U5ELL2   A0A084VDS1   A0A0L7R6S6   A0A182RVM9   A0A1Q3F5N1   A0A182TE07   A0A1S4GWA2   A0A182X1J9   A0A182L2H4   A0A182IEI0   B0WXG5   A0A182MZC9   A0A2M4BMN0   Q172D0   A0A182JZ35   A0A182XZL2   A0A0C9RSD8   A0A2M4AI82   A0A2M4CTS8   A0A182SD55   A0A1B6MJZ4   A0A182W7S5   A0A182P0E5   A0A182FN71   A0A2M3Z778   Q7Q3C3   A0A1B6JLU7   A0A182J008   A0A182M899   W5JVH0   A0A2S2P0S8   A0A1L8DAU2   J9JNE9   A0A0P5ZA17   A0A2H8TJB7   A0A232F4P2   A0A2S2PWU0   A0A182H6A0   E9G1Z9   E0VCM3   A0A1D2N5M0   A0A151IWR0   A0A1B6JY84   A0A3B0JUE8   B4LPX8   A0A182Q639   A0A0P6E6D8   A0A0J7L1K5   A0A0R3NS81   Q5BI22   A0A0B4KEK4   A0A0B4KEU4   A0A1W4UID8   Q291I1   A0A0J9RAF5   A0A0R1DQF0   A0A0Q5W2A3   A8DYA5   B4GAP3   A0A0J9RAI0   E2ADF4   A1Z8M8  

PDB

1FS2     E-value=1.31547e-11,     Score=168

KEGG

101735745    K10268 F-box and leucine-rich repeat protein 2/20 | (RefSeq) F-box/LRR-repeat protein 20

GO

GO:0031146   GO:0006511   GO:0019005   GO:0016567   GO:0016021   GO:0034976   GO:0005515   GO:0032222   GO:0051015   GO:0005925   GO:0007016   GO:0005856   GO:0007155   GO:0003779  

Length:

431

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02885

Exp number, first 60 AAs:

0.01308

Total prob of N-in:

0.00893

outside

1  -  431

 

 

Pi

242.398301

Theta

196.291403

Tajima's D

1.837089

CLR

0.02305

CSRT

0.857607119644018

Interpretation

Uncertain