Silkworm Genome Informatics Database

Gene

KWMTBOMO00992

Pre Gene Modal

BGIBMGA001375

Annotation

PREDICTED:_atf2_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr2(+):8106928-8117549 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.285

CDS

ATGGCGAAAGCAACATCTGGAAAAAAAGCAATAATTTCCGATGACGATGTCGATCAGTTGTTGCAACCACATCAGACAACCAAGGAGATGGCATTTATGCGTTTACAATCGTTGTACGAGATGTCACGAGTAGTTAGAAGTAATACTGATATGCAGCCACAATTTCGCGCCCGTTTTAGAGATATTGTCGCTTTGAGAACTGCATATGAAAGTGCTATGAGTGAAATGATTTGTGTCCAAAAACGCTATAATGCGTCGTATGTACCGTCATACGACCAAATCAAAGCATTTGATGAGATGTATTACTCTGTTTGTGATATCGCGGATAGCCTAAATTTATCAGGTAGTGATAATACTAGATGTGATTTCGGTTCCGGTAAAACTGTAAAACCTCGATTACCGAAATTAGAAATTTTCCACTTTGACGGAAAGTTAGAAAATTGGCCCACGTTTAGAGACACCTTTACTAGTTTAGTACATTCTAATACTGATATAGTTGATATTGAAAAATTTTATTACTTATTGTCGGCTGTGAGTGGTCCAGCACTCACTATCGTAAAATCAATGCCGATAACAGCAACAAATTATTCGATTGTATGGAATTCTTTAGTTACACGTTTTGAAAACAAGAGGGCGCTAGCGACTACATATTTAGATAAAGTCTTTAGTTTCAAACCATTACAATATGAGTCAGTAGACGGCCTAAATGCCTTTTTACAAGGGTGTCAAGATAGGGTCAAAGCATTAAAATCATTAGACATACCAGATTTATCAAGTTTTGTTTTGTTTTATGTAGCTTTGCGTAATTTGGATTCAACTACTAGGCGCGCATTCGAAAACAAAAGTGTACCGGGTGATCTTCCGACATTTGAGGGTCTTATCGCTTTCGTGGAAAACCAGGTCCGTATCCTGGAGATGTCGGAAAGTAAATCGGTCTCAAACCAAAGCATAGACAATGCAAAACCTATATACGCAAAGGGTTACCAGAATTCCAGTCGTTTTGATAAAAAGCTTAATATTTCAAATGCCAGGGTGGGTGCGCCTAGAACATCTTTGGCCTCAGCCGCAACTGCGGCTACTAAGAATCTTCAGAACAAACAAAACTCGAATGAAACTTTAAATAAAATTAAAAAATGTTATTATTGCGGGAAGCCTCATTCAATATATCGGTGCTTCGAATATAGTGATCTCACTCCTGAACAACGGCTTCAAAAAATAAAACAGTTGAAATTATGTGAAAATTGTTTGCGTGATGATCATAATATATTAAAGAGTTGTCCATCTAGGGTACGTTGTACAGTTTGCAAAAATATGCACCATCACACACTTCACATCGATGCTGGCGCTGGTGCCAATTCAGGAAATAATGCCAGCTCGGTGGCTCTTACCGTTTCTACAACTTCGAAAGTCTTGCTCGGAACCGCAATTATACACGTCGCAAATTGTTGGGGCATCTATCAACCCGTACGTGCTATAATTGACAGTGGTGCCATGACGGGCTACATAACTCAAGACTGTGCATTAAGGTTAGGACTAGGGCGGAGAAAGTGTGATTTCGATTCTATTGGTCTAGGTGCCAAGCCTATTGCAGATCTGGGGCTAACTACCTGTACTGTAAAACCGCGTCAGTGCGATAGCCCCATATTAACTACTGATGTAGTCATAGTTGCAAAAATAGCCGGAAATCTACCGACTATGTCTATATCAGATGATGTGATCCGTAAATTTCAAAATCTTCCACTTGCTGATCCAACTTTTGGTACACCGGGTCCCATCGACATGTTACTGGCCGGAGATCTGTTTCCTCAAATTTATGATGGAGAAAAAATCATGCCACAAGATAAGAATATGCCGGTGGCACTGCATTCCATTTTCGGTTACGTTATTGCAGGTCAAGTCTTTACTTCGGCTCATAGAACTTTAAACGCGGAAAATTGTCATATCAAAACTAATAATACGAAATCATTTGTGGCTCTTTCTGTGAACTTGGAGCAAGAAACGCAGTCTGTCTCTGAGATGGAAAGTATTCTTAACAAGGAACCACAACATCCAGATAAAAAAATAATATCAGTAGGGACATTGTCTGATCGCGATCATAACCGTGATAAGAAAAGTAGATGTTTCGTAAACTACCCTTTGGAACCTTTTTATAAACTTTATGTTTCATATGGAGCAGAAGAACGTAAATACATTGATATAGGAAATAATTTGGAACGCGATCCGAAATTTATTCGTGAGTACGAAAGTCTTGGTGGACACAAGAGCCACGTAGATAATGCCAATTTTGTGTCGGCTACGAAACATTTGGCAGATGTTACGCGTTTTTTCGAATCACACTTAGAAAGCTTATCAGGAGAACTTGTAGCACGTAATATTCGTTGGAGCCATTACCCTCCTAGTGGTGGTCGTTTCGGTGGCTTCTATGAGTCTGCAATAAAATCTGCTAAATTATATTTGAAACGGATTGTAGGAGACAAATCATTTCCATTCAAAGAGCTCCGAACGCCTTTTGCTCGGTTTGAAGCAGTTCTCAATTGTAGACCGCTATGTCCACTGTTTGATGATCCAGAGGAGTTCCAAGTGCTGACGCCGGCACATGTTGTGATCGGGCGGGAATTGTTCGCTGTACCGGTATTCGATATCAAACCAGAAAAACCATTTGCTTGTACGATGCCAGACTGCGGCATGACCTTTACTAATGAGGATCATCTGCAATTACATACTAAAAAACACGATATGATGTTACAATTAGGTTTGGAGCAAAAAGCAGCTTTTGTTGCTGATCAAACCCCAACTCCTACAAGATTTATCAGAAATTGTGAAGAAGTAGGTCTCTTTCAAGATTTACAAAATGACAACCCCTTTGATGAAGGCTTCAAAAGAGCCATGGAAACTAAACAACACATCTTATCTCTCGAGAGTATTGCAACAATATCAAACACAGATGATCTACATACACCACAGATGGTGTTCCCACTGGAACACACTGATTCGACATTGTTCAGTACCACAAATAACCAGAGAAATATCACTATTAGCAGATCATCAAGTGACGAATCTGGAGCTATCAAAGAATTTGAAACGACGACAATATCTAAATTAACAAATGAAGTAACAACAATAAGTCGTATAGTCGAGAAACACGATGATAACCGAGTAGATGATTCCAAACTCAAAGACGAGGTCATCAAGGACTCAATTTCATACTCAAATAATATAATTAAAATACACAGTGAAATCCGAAGAGATGATATGAACAAAAATCCGATACAAACATTTGAAGATACCACAAAGAACAATAAAATAACTGATGTCCCGCCTATAATGAGTCAAACCTCTATAGATTATGTTGTCGAAACATTAACTAATGACTTATGCAATGACACAGCTAACAAACATGATGAAAGTGATAATATAGAAGTATTAATAAGATTGCCAAACGGTAGACAAGTGAGAATGAAGTCAGTGGAGGATGAACCAAAAGTAAACGCTAAAGAAAAACTCAAAAGAGTTTTGTCGGAGAAATCTAAAACTAAAAGTCCCACTATCTCGAATTTAGTACCAATAAGTGGTGGAACACTAATTCCAGTCACGATAGTAGCAGCTCAACCACAAAAGATACCCATACCACCATTTAGAGTTGCTAGGAATTACGATAAGAAAGCAGTGAAGCGAAAAAATTTAGACACCGGGAATCAGTGTCACAGTGTCTCGAGTGAGAAGCAGAGTGATTTGGACAGTCGCAGTGCAGCATCGAGGAGATATAGAGCGAGATTAAAAGAGTCCTGGATAAAACAGTGCGAAGAAAATAGACAGCTGAGAGCATCAAATGACAGACTATTGTCGGAATTGACAAAATTAAAATTATTGCTAACGGAACACCTGAAGAGATGCCCTAATGCTGATGACATAAGTACGATACAAGAAAAATTATAA

Protein

MAKATSGKKAIISDDDVDQLLQPHQTTKEMAFMRLQSLYEMSRVVRSNTDMQPQFRARFRDIVALRTAYESAMSEMICVQKRYNASYVPSYDQIKAFDEMYYSVCDIADSLNLSGSDNTRCDFGSGKTVKPRLPKLEIFHFDGKLENWPTFRDTFTSLVHSNTDIVDIEKFYYLLSAVSGPALTIVKSMPITATNYSIVWNSLVTRFENKRALATTYLDKVFSFKPLQYESVDGLNAFLQGCQDRVKALKSLDIPDLSSFVLFYVALRNLDSTTRRAFENKSVPGDLPTFEGLIAFVENQVRILEMSESKSVSNQSIDNAKPIYAKGYQNSSRFDKKLNISNARVGAPRTSLASAATAATKNLQNKQNSNETLNKIKKCYYCGKPHSIYRCFEYSDLTPEQRLQKIKQLKLCENCLRDDHNILKSCPSRVRCTVCKNMHHHTLHIDAGAGANSGNNASSVALTVSTTSKVLLGTAIIHVANCWGIYQPVRAIIDSGAMTGYITQDCALRLGLGRRKCDFDSIGLGAKPIADLGLTTCTVKPRQCDSPILTTDVVIVAKIAGNLPTMSISDDVIRKFQNLPLADPTFGTPGPIDMLLAGDLFPQIYDGEKIMPQDKNMPVALHSIFGYVIAGQVFTSAHRTLNAENCHIKTNNTKSFVALSVNLEQETQSVSEMESILNKEPQHPDKKIISVGTLSDRDHNRDKKSRCFVNYPLEPFYKLYVSYGAEERKYIDIGNNLERDPKFIREYESLGGHKSHVDNANFVSATKHLADVTRFFESHLESLSGELVARNIRWSHYPPSGGRFGGFYESAIKSAKLYLKRIVGDKSFPFKELRTPFARFEAVLNCRPLCPLFDDPEEFQVLTPAHVVIGRELFAVPVFDIKPEKPFACTMPDCGMTFTNEDHLQLHTKKHDMMLQLGLEQKAAFVADQTPTPTRFIRNCEEVGLFQDLQNDNPFDEGFKRAMETKQHILSLESIATISNTDDLHTPQMVFPLEHTDSTLFSTTNNQRNITISRSSSDESGAIKEFETTTISKLTNEVTTISRIVEKHDDNRVDDSKLKDEVIKDSISYSNNIIKIHSEIRRDDMNKNPIQTFEDTTKNNKITDVPPIMSQTSIDYVVETLTNDLCNDTANKHDESDNIEVLIRLPNGRQVRMKSVEDEPKVNAKEKLKRVLSEKSKTKSPTISNLVPISGGTLIPVTIVAAQPQKIPIPPFRVARNYDKKAVKRKNLDTGNQCHSVSSEKQSDLDSRSAASRRYRARLKESWIKQCEENRQLRASNDRLLSELTKLKLLLTEHLKRCPNADDISTIQEKL

Uniprot

NA

ProteinModelPortal

NA

PDB

1BHI E-value=1.51257e-06, Score=129

KEGG

100862750 K04450 cyclic AMP-dependent transcription factor ATF-2 | (RefSeq) atf2

PATHWAY

04013 MAPK signaling pathway - fly - Bombyx mori (domestic silkworm)
04624 Toll and Imd signaling pathway - Bombyx mori (domestic silkworm)

GO

GO:0003676 GO:0046872 GO:0051015 GO:0005925 GO:0007016 GO:0005856 GO:0007155 GO:0003779 GO:0016021

Length:

1311

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.706669999999997

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03016

outside

1 - 1311

Pi

255.347204

Theta

195.525365

Tajima's D

1.262606

CLR

0.533698

CSRT

0.729713514324284

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree