Silkworm Genome Informatics Database

Gene

KWMTBOMO00989 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001372

Annotation

PREDICTED:_talin-1_[Bombyx_mori]

Location

Bomo_Chr2(+):8039538-8078746 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.345

CDS

ATGGCCAGTGCCGTGAAGCGTGCAGACCAGGATCAGTTCCCGCGCTCCGTGGGCTCCGTGGCCAGTGCTGTCCATGGACTCGTCGAGGCAGCCGCGCAAGCCGCCTATCTTGTGGCCGTGTCTGAAGAGTCCAGCGTGGCCGGCCGCGCGGGGCTGGTGGACCAGGCCCAGTTCGGGCGCGCCGCCCTCGCCATCCAGCAGGCCTGCAACCTGCTGGCCGACCCCGCCTCCAACCAGCAACAGGTCCTGTCGGCGGCGACGGTGATAGCCAAGCACACCAGCGCCCTCTGCAACGCGTGCCGGGTGGCCTCAGGCAAGACCACAGAGCCGCAAGCCAAGAGGCACTTCGTTCAGGCCGCCAAGGACGTCGCCAACTCCACCGCGGCCCTCGTCAAGGAGATCAAGGCGCTGGACACGGACTACAGCGAGGCCAACCGGGCTCGGTGTGCCAGCGCCACTGGGCCGCTGCTGGAGGCGGTGCAGTCGCTGTGCCAGTTCGCGGACAGCCCGGAGTTCGCTTCGATCCCGGCCAGGATATCCGAGCAGGGACGCAGGAGCCAGGAGGACATATTGGAGTGCGGCAGGAACATCATATCGGAGTCGTGCTCGATGCTGGAGGCGGCGGGGCAGCTGGTGCTGTCGCCGGAGGACCGGCCGCAGTGGCACGCGCTGGCCGCCCACAGCAAGACGCTCTCCGACACCATCAAGGCGCTGGTCGCCAACATACGGGAGAAGGCCCCCGGGCAGCGCGAGTGCGCGGCGGCCCTGGACACCCTCAACAAGCAGCTGCGGGAGCTGGACCACGCCGCCATCCAGGCCGTCGCCCAGGAGTTGGAGCCCCGGAAGGCCAACACGCTGCAAGGTTACGCGGAGCAGATCGAGAACTGCTGCACGGAGATGCTGGAGCGTCTGGAGCCGCTGCGCGTCGCCGCCCGGGCCGAGGCCGAGAACCTGGGCCACTGCGTCAGGCAATACGTGTCGTACTCGGAGCCGCTGGTGTCGGGCGCGGTGGGCGCGGCGTCCGGCGTGTCGGAGACAACGGAGCAGGCGGCGCTGCTGCAGCACGCGCGCACCGTGCTGGAGACCGCCGTGCTGCTGCTGCAGGCCGCCAGGGACGCCGCCGGGAACCCCAGGGCGGCGGCGGCGCACGGCGCGGTGGACGCGCAGGTGGTGCAGGCGCGCGAGTCGCTGCAGGAGCTGGCGGAGCGGGTGAGGCGGCTCAGCGCGCAGCACGGCGCCGTGGGCCCGCTGCTCGACACGCTGGCCCGCGCGCTCACCAGGCTCACGGAGCGCAGAATGTCTCTGCTCAGCTCTTACGATGAATCAGATTCGTTTGTCGACTACCAGACAAGGATGGTCGGAGTCGCGAAGGAGATAGCGAGACTGGCCACTGACATGACGGCCAAGGCGGCGACGGAGCCCGGGCGGCTGGTGGAGCTCGGCAACGAGATGTGCGGCAAGTACGAGCAGCTCGCGCAGGACAGCGTCGGCGCCTCCGCCACCACGCCCAGCGGGGACGTCGCCAACAGGATCCGATCAGCGGTGGTGGAGCTGGGCGAGAGCATATCAGAGCTGATCAAGGCGGGGGGACACTGCCGCCTGTCCGCCATCGCGCAGAACCAGCGCGCCGTCGCCGACAGCGCCAAGCTCGTCAACGAAAGGGTGGTGTCGGTGCTGAGCGGGCTGCAGGCGGGCTCCCGCGGCACGCAGGCCTGCATCCACGCCGCCGCCACCATCAGCGCCATCATCGGAGACCTGGACACCACCATACTGTTCGCCAGCGCCGGAACTCTTCAATCTGACAAGGAGTCGGACACGTTCTCCGACCACCGCGAGAACATCCTGAAGACGGCCAAGGCGCTGGTGGAGGACACCAAGACCCTCGTGGGCGGAGCGGCCGGCACCCAGGAGCAGCTGGCCGACGCCGCGCAGAACGCCGTCACCACTATAGTGCAACTGTGCGAGGTGGTGAAGCTGGGTGCCATGTCGCTAGGCTCGGGCAGCCCGGAGCCGCAGGTGCTGGTGCTGCACGCCGCGCGGGACGTGGCCGCGGCGCTGCGGGACCTGGCCGCCGCCACCACCGCCGCCAGCGGCAAGCCCGGCCTCGGCGCCGACATGCAGCGCCTCAAGCACGCCGCCAAGCGGCCGCCAGCCCCGCGGCGGCGCTGCAGCGCGCCCGGCAATAGCAACACGTTCCCGGGACAAAAGCGCAGATCACTTAACGGGAGAAACGACTACAACTCTTGCGATTCCGAAACCGATTTGTTCCAATCCGACCAGGAGGAGGAGCTGGTCAAGCTCCTGGACTACTCCAGCCAGGACGACGACGTGTCCCCGACCATATTCCACGACGACTGTGAGGAGATCGTCGCCTACATAGAGAGCCGCATGCGCCGCCCCACCAGGACCCCAGAGGACGAGGGCCTCAACGAGCGGTACAACGCGGCCGCCAGGTACAGCATCGTCGACATGGACTGGCGCGTGCTCAAGTACGGAGAGAACATCCTGCTGGGGGAGGTCAAGAAGCTGCTCGACCTGTGTCTCCAGCTCAGCGATCGAAATGACAGCAGACGCAAGGATGAGAGTTTGCAGCGCCTGCGGGCCAGCACCCAGCTGGACACGGAGATGCACACGCTCTCGCGGGTCATTGAGCACCTCGACTCGGAAGCGGAGGCCAGTACAGCCCCGGCGGCGACGGTGCCAGCGAAAAAACCCAAACTGACCGACGAACCTAAACTAAAAAGTCCGGTTTTCAAAATCAAAAAAGTCAAACCTATAAACATATGCTCCATCAAGAACAGTCCCGAACGGGAGATGATACTGACTCCTCAAGAACCAAGAGGATCTACCGAGATCTTCATCACGCCTGAAGCCAAATCGGCTCCGACAGCTGATCCGATCAAAGCTAAAGTTGAGTTTTGGAAGCTGTTCAAAGACGACACGGAATGGTGGAAGGCTCTAGCCAAGAGAAACTTGGAGAAGATGGAAGAGTCCCGCCGCGAGCTGCAGAGGTTCAGCGGACACGAGCTCGTTCTCGAAGAGATAAAGATGGAAAGAGACAAATACGAGAAAGAGAAGACACGCCTGCAGACCTTCATCGATGAAGTGGACACCTCGATACAGAAAAAACGGGATCTAGAGTACGACCAAAAATACGAGGAGATGGTCTTAAAATTAATCGAATTTGCGAAAAAGGACTTTATCTACAAGGGCTTTGATCCTTTAATCGAGCGACTGAAAGCTTTGGCGAACGTCCATGTCGAGGGACGCAAACGGAAAGTCGTCAATATAGAAGACATCCTGAACGTATACACGCAAATTGACATCACAAAATACACATACGAGGAATTGTGTCTCTTAGAGAAGTATTATAAGGAAATCATAAGGAAATACACGCAAGAGTACCACGGTAAAGACAGTCTAGAAGCAGGCGACACCCGCATCTACCACAAGAACGTGGTCCTCAACGTGAACACAACGAACAACTTGACCAAAAGCGTCAAGACCAGCGGCGACACTCTGAAGCGGAGTCACAGAAACATGGAGATATTCGACCTGACCAGGACGTACCCTCAAGAGTATTACGCGAACAACTGGTGGTCTATTTATGAAGACATCCTCAAAAACAGGGAAAACCAATTCGGGACTATCGATAACTGGTGGAGTTTCTACGAAGCCATATTGAATAAGGAGAGCACGTCGCAAGAAGATCTGAACAGGCTCCGAGCTGTGGTCCAGTACAGGAATAGTCTGAGGAAGAGACCTCACAGCAGGGCGGAGGAGCAGTTGAGGATGCTGGACGAAATACATAACAATCGGTTTCGGGAGGTCGAAGACGTGCAAGAGAAAAAGGACGAATCGGTGATGGTGACTAATGTGACGTCACTGCTGAAGACCGTCAAGGCTGTTGAAGACGAACACACCCGGGGCACGAGGGCACTGGAGTCCACCATCGAAGCCATATCTCAGGAGATTGAGGTCCTAATGTCACCGTCTCCGCCGAAGTCAACCGCAACTCCGGAAGAGCTGATCCGCTGCACGAGACAGATGACCGTGGCCACGGCCAAAGCTGTGGCCGCTGGGAACGCCAACAAGCAGGACCAGCTGACCGCCGCTGCCAACCTCGGCAGGAAGACCGTCGTGGACCTGTTGATCAGTTGCAAGGCGGCGGCGCAGGCGGCGGAGAGCGCGGAGGTGCGCGAGCGCGGCGTGCGGGCGGGGCTGGCGGCGGCGCAGGCCTACCGCGCGCTGCTGCAGGCCGTGCTGCAGGCCGCCACCGGGGACTCCGCCGCGCGCCAGCAGTTCCCGGAGCTGTCCCGCCGCGTGGCGCACACCGTCGCCGACATCATCGCCACCGCAGAACTGCTCAAAGGTTCGGACTGGGTGGACCCCGACGACCCCACGGTGATAGCCGAGAACGAGCTGCTGGGGGCCGCCGCCTCCATAGACGCGGCCGCCAAGAAGCTGGACTCGCTCCGGCCCAGGAAACCAGTGAAGCAGGAAGCCGATGAGACTCTGAACTTCGACGAAATGATCTTGGAAGCTGCCAAGTCCATTATAGCTGCGACGTCGGCCCTCGTCAGGGCTGCCTCCGCGGCGCAGCGGGAACTCATCGACCAGGGTGCCGTGGCGCGCCGGCCCGCCATGTCGTCGGACGACGGGTCGTGGTCGGGCGGGCTGGTGAGCGCGGCGCGGCTGGTGGCGGCGGCCACGCACTCGCTGGTGGAGGCGGCCAACGCGCTGGTGCAGGGCGCCGCCACCGAGGAGCGCCTCATCTCCAGCGCCAGGCAGGTCGCCTCCTCCACCGCGCACCTCCTCGTCGCCTGCAAGGTGAAGGCGGACCCCGGGGCGGAGAGCACGCGGCGGCTGCAGGCGGCGGGCGCGGAGGTCATCCGCTCCACGGACAACCTGGTGCGCGCCGCCCGGGACGCCATCCACTGCGACGACGAGCGCAGCCTCGTGCTCAACCGCCGCATGGTGGGCGGCATCGCGCAGGAGATCGACGCCAGGTCGGAAGTGCTCCGCATCGAGAAGGAACTGGAGGAGGCCCGCGGCAGGCTGACGGCCATCAGGCAGGCCAAGTACAAGCTGAGGAGCGACGCTGACGACTCCGACGCTGACCCGCAGCCCGGCTACGGCAGCGACTCCTCGGGACCCCAGCGGGTGCGGACTCCTAACAGCAGCTTCGCGAACACCACGTACAGCCCCAACAGCTCGCAGCAGACCACGCTGCACCAGAGCTCGCTGCTGCAGACCACGCACAGCTCCGGACTCAACTCCACTTCCTACGGACAGCAGAACAGCAGCAGCCCCGCCCCCCCGCAGCCCACCAGCCCGACGTTCTCCAGCTTCCGTCCGGCGCCGGACGCGCCCAAGCAGAACTACGAAGCCTTCACGACACGCTACGAAACTCGAATGTACGACACGCCGCGACCGGTAGCCGAGCACTCCACCACCGAGCGACAGGAGACCAGCCAGTACAGATACAAGCAGGAGAAGTTGGACTACGAAGCGCCCAGGACGCCCCTGAGCCCTAAGTTCAACGCCAGAGAGCTTAAATTCGACGAGCACCCCGAGCCGATATACTCCACCCTGAAGAAACCCTCCGACGGTTTGGGACAGACGTTCTCGGAGCACCAGAGGTCCACGGAGTCCATCCCCGGAGGCACCAAGCATTCAGAATACACAATCAAAAGTGAATCTTACCAGTCGTTCCCGAAGACGGAGTTTTCCAAAACGGAATTTAAGCAGGAAGTGAAATCTCCATTCACATCCACTCCGAAGTTTGATCGCACAAGCTACGTGACCACCTCCAGTGACCTGGTGAAGGCCGCCACGCCGGACTACGAGCGCATGGCTTCGCCCTACGCCAAGGAGGGCGACAGCTACGGAGGTCCCAATTACATGGAGGAAACCACCACGGAGGTCAAAGAAATACCCAACGGCACCCAGAAGATCACTACAACGAAGATATACAGCTCGTCGCCCGTCAACCTGACCTCCACCAGCACCAAGTACGAGCCGATCAAACTGGACGGAATCGACGAAATCTCGAAGACCTTCGACAGCGACTCCCGGTACAGCACCCTGGACTCGAGGTTCAACACGCTAGAGTCCAAGCTCAGTTCGGACACGAGCCGCTCCTTCATGAGGCCGTCGGAGTTCCAGTCGTCAGACTACCAGACCACCAGCAACGTGACGAAGATCAAGAAGCCGGATCTGTCGAAGGAGATCGACAGCCTGGACAAGAGGATCTCAAAGCAAACGATCACCTCGGAGACTATCGAAAGGAAGTCCGTAATGACCAGCTCTCACAAATCGGAGACCAGCTCCACCGTCACCAAGAAATTCGGGAACTTCTAG

Protein

MASAVKRADQDQFPRSVGSVASAVHGLVEAAAQAAYLVAVSEESSVAGRAGLVDQAQFGRAALAIQQACNLLADPASNQQQVLSAATVIAKHTSALCNACRVASGKTTEPQAKRHFVQAAKDVANSTAALVKEIKALDTDYSEANRARCASATGPLLEAVQSLCQFADSPEFASIPARISEQGRRSQEDILECGRNIISESCSMLEAAGQLVLSPEDRPQWHALAAHSKTLSDTIKALVANIREKAPGQRECAAALDTLNKQLRELDHAAIQAVAQELEPRKANTLQGYAEQIENCCTEMLERLEPLRVAARAEAENLGHCVRQYVSYSEPLVSGAVGAASGVSETTEQAALLQHARTVLETAVLLLQAARDAAGNPRAAAAHGAVDAQVVQARESLQELAERVRRLSAQHGAVGPLLDTLARALTRLTERRMSLLSSYDESDSFVDYQTRMVGVAKEIARLATDMTAKAATEPGRLVELGNEMCGKYEQLAQDSVGASATTPSGDVANRIRSAVVELGESISELIKAGGHCRLSAIAQNQRAVADSAKLVNERVVSVLSGLQAGSRGTQACIHAAATISAIIGDLDTTILFASAGTLQSDKESDTFSDHRENILKTAKALVEDTKTLVGGAAGTQEQLADAAQNAVTTIVQLCEVVKLGAMSLGSGSPEPQVLVLHAARDVAAALRDLAAATTAASGKPGLGADMQRLKHAAKRPPAPRRRCSAPGNSNTFPGQKRRSLNGRNDYNSCDSETDLFQSDQEEELVKLLDYSSQDDDVSPTIFHDDCEEIVAYIESRMRRPTRTPEDEGLNERYNAAARYSIVDMDWRVLKYGENILLGEVKKLLDLCLQLSDRNDSRRKDESLQRLRASTQLDTEMHTLSRVIEHLDSEAEASTAPAATVPAKKPKLTDEPKLKSPVFKIKKVKPINICSIKNSPEREMILTPQEPRGSTEIFITPEAKSAPTADPIKAKVEFWKLFKDDTEWWKALAKRNLEKMEESRRELQRFSGHELVLEEIKMERDKYEKEKTRLQTFIDEVDTSIQKKRDLEYDQKYEEMVLKLIEFAKKDFIYKGFDPLIERLKALANVHVEGRKRKVVNIEDILNVYTQIDITKYTYEELCLLEKYYKEIIRKYTQEYHGKDSLEAGDTRIYHKNVVLNVNTTNNLTKSVKTSGDTLKRSHRNMEIFDLTRTYPQEYYANNWWSIYEDILKNRENQFGTIDNWWSFYEAILNKESTSQEDLNRLRAVVQYRNSLRKRPHSRAEEQLRMLDEIHNNRFREVEDVQEKKDESVMVTNVTSLLKTVKAVEDEHTRGTRALESTIEAISQEIEVLMSPSPPKSTATPEELIRCTRQMTVATAKAVAAGNANKQDQLTAAANLGRKTVVDLLISCKAAAQAAESAEVRERGVRAGLAAAQAYRALLQAVLQAATGDSAARQQFPELSRRVAHTVADIIATAELLKGSDWVDPDDPTVIAENELLGAAASIDAAAKKLDSLRPRKPVKQEADETLNFDEMILEAAKSIIAATSALVRAASAAQRELIDQGAVARRPAMSSDDGSWSGGLVSAARLVAAATHSLVEAANALVQGAATEERLISSARQVASSTAHLLVACKVKADPGAESTRRLQAAGAEVIRSTDNLVRAARDAIHCDDERSLVLNRRMVGGIAQEIDARSEVLRIEKELEEARGRLTAIRQAKYKLRSDADDSDADPQPGYGSDSSGPQRVRTPNSSFANTTYSPNSSQQTTLHQSSLLQTTHSSGLNSTSYGQQNSSSPAPPQPTSPTFSSFRPAPDAPKQNYEAFTTRYETRMYDTPRPVAEHSTTERQETSQYRYKQEKLDYEAPRTPLSPKFNARELKFDEHPEPIYSTLKKPSDGLGQTFSEHQRSTESIPGGTKHSEYTIKSESYQSFPKTEFSKTEFKQEVKSPFTSTPKFDRTSYVTTSSDLVKAATPDYERMASPYAKEGDSYGGPNYMEETTTEVKEIPNGTQKITTTKIYSSSPVNLTSTSTKYEPIKLDGIDEISKTFDSDSRYSTLDSRFNTLESKLSSDTSRSFMRPSEFQSSDYQTTSNVTKIKKPDLSKEIDSLDKRISKQTITSETIERKSVMTSSHKSETSSTVTKKFGNF

Uniprot

H9IVU1 A0A194PUE4 A0A194RHP8 A0A2H1VQD5 A0A0L7LT92

Pubmed

19121390 26354079 26227816

EMBL

BABH01038077 BABH01038078 KQ459593 KPI96374.1 KQ460152 KPJ17353.1 + More
ODYU01003822 SOQ43055.1 JTDY01000135 KOB78675.1

Proteomes

UP000005204 UP000053268 UP000053240 UP000037510

PRIDE

H9IVU1

Pfam

PF08913   VBS        + More
PF01608   I_LWEQ
PF09141   Talin_middle
PF16511   FERM_f0
PF09379   FERM_N
PF00373   FERM_M

Interpro

IPR015009   Vinculin-bd_dom        + More
IPR035964   I/LWEQ_dom_sf
IPR036723   Alpha-catenin/vinculin-like_sf
IPR030224   Sla2_fam
IPR002558   ILWEQ_dom
IPR000299   FERM_domain
IPR015224   Talin_cent
IPR019748   FERM_central
IPR011993   PH-like_dom_sf
IPR036476   Talin_cent_sf
IPR018979   FERM_N
IPR037438   Talin1/2-RS
IPR035963   FERM_2
IPR019749   Band_41_domain
IPR032425   FERM_f0
IPR014352   FERM/acyl-CoA-bd_prot_sf

SUPFAM

SSF47220   SSF47220        + More
SSF109885   SSF109885
SSF47031   SSF47031
SSF109880   SSF109880

Gene 3D

1.20.80.10 2.30.29.30

CDD

cd12150 talin-RS
cd14473 FERM_B-lobe

ProteinModelPortal

H9IVU1 A0A194PUE4 A0A194RHP8 A0A2H1VQD5 A0A0L7LT92

PDB

5IC1 E-value=1.65296e-79, Score=760

KEGG

101737442 K06271 talin | (RefSeq) talin-1

GO

GO:0007155 GO:0051015 GO:0001726 GO:0005925 GO:0005856 GO:0005200 GO:0007016 GO:0003779 GO:0016021

PANTHER

PTHR10407

Length:

2120

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.2431

Exp number, first 60 AAs:

0.24212

Total prob of N-in:

0.01135

outside

1 - 2120

Pi

356.024925

Theta

189.075366

Tajima's D

2.612598

CLR

0.158026

CSRT

0.952452377381131

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
28556443	ALLQAVLQAATGDSAAR	100.00	3e-08
28467696	YEPQAEIGISHVIR	95.65	3e-08
26280517	SFIIQCCPHEIISSTR	100.00	2e-07
28467696	SFISNYANIR	100.00	2e-07
26822097	IYSSSPVNITSTSTK	100.00	9e-06
26280517	EGDFVSFIHNQMGTK	100.00	9e-06
28467696	EGDRFIQAANACR	100.00	9e-06
26822097	EGDSYGGPNYMEETTTEVK	100.00	2e-04
28467696	MYDIFIK	100.00	2e-04
28556443	LSAQHGAVGPLLDTLAR	100.00	4e-04
21761556	AAAQAAESAEVR	100.00	0.002
31250652	LTQALLDSLHEEGKLTSMSLWVELYPVISADMR	100.00	0.005
28556443	TVLETAVLLLQAAR	100.00	0.016

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics