Silkworm Genome Informatics Database

Gene

KWMTBOMO00988 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001370

Annotation

Talin-1_[Papilio_xuthus]

Location

Bomo_Chr2(+):7955908-8038712 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.152

CDS

ATGGCGACCCTATCGTTGAAGATCTCCATTGACGGAGGCAAGGTCGTGAAGACAATACAGTTCGAACCCTCCACCACAGTGTACGACGCGTGCCGCATCATCAGGGAAAAGATCTTGGAGGCCACAGCGGGAGACCCAAAAGAGTATGGCCTCTTCTTGGCTTCGGAGGAAGACAACAAGAAGGGGATATGGCTGGAAGCGTCCCGAAGTCTTGACTATTACATGCTAAGGAACGGAGACCTTCTGGAGTACAACAAAAAGACCAGGAATCTCAGAGTCAGGATGCTTGATGGTACTGTGAAAACCCTGCTGGTGGACGACAGTCAGATCGTCGCGAACCTCATGGTAGTGATTTGCACCAAGATCGGGATCACCAACTATGACGAATACGGCCTGGTTCGGGAAGAGCAAAAGGAGGAACCGGATCCCTGCGAGAAGCCAAACTACGGGACTCTGACCCTGAAGCGTAAGCACCAGGAGAAGGAACGAGACGCCAAGATGGAACAGCTCAGGAAGAAACTCAGAACTGATGACGAAGTGAACTGGGTGGAGGGGTCGCTGACCCTTCGTGAGCAGGGCGTGGAGGCGGGCGAGACCTTACTGCTGCGCCGCAAGCTGTTCTACTCGGACAGGAACGTGGACTCGCGCGACCCCGTGCAGCTCACCCTGCTGTACGTGCAGGCCAGGGACGCCATCCTGGCCGGCGCGCACCCCACCACGCAGGAGAAAGCTTGCGAGTTTGCCGGGATACAGTGCCAGATACAGTTCGGGGACCACCGGGAGGACAAGCACACGCCAGGATTCCTCGATTTAAAAGAGTTCCTGCCGGCCTCGTACGTGAAGGTGAAAGGCATCGAGAAGAAGGTGTTCAGGGAGCACAAGAAGCACGTCGGGCTCAGCGAGCTGGACGCCAAGGTGCTCTACACCAAGACGGCGCGGGACCTCAAGACCTACGGAGTCGCCTTCTTCCTCGTCAAGGAAAAAATGAAAGGCAAAAACAAACTGGTACCGCGTCTTCTGGGAGTCACGAAGGACTCCGTGCTCAGACTGGACGAGAAGACGAAGGAGATCCTGCAGACGTGGCCGCTCACCACCGTGAGGAGGTGGTGCGCCAGCCCCAACACTTTCACCCTCGACTTTGGCGATTACAGCGACCAGTACTACTCGGTGCAGACCACGGAGGCGGAGCAGATCCTGCAGGTCATCGCCGGCTACATCGACATCATCGTGCGGAAGCAGCGGGCCAAGGAGCACCTCGGCATCGAGGGAGACGAGGGCTCCGCCATGCTCGAGGACTCCGTGTCGCCCTCCAAAGCGAACATCATCCAGCACGACACGTTCAAGTCCGGTAAAGTGAACACCGAGTCCGTCGCCAAGCCGGCGGTGCACCGGCCCGGAGCTGAAGGTGCGAAGCCGTTCGCCGTGGGGCACGTGACGGGCGCGCAGCTGACCACGGTCTCCGGGCAGGTGGTGACGGGGCACGCGCCGCCCGCCGCGTCGCAGGTACAGCAGACCAAGGTGACCTCGATACTCACGGAACCTCAGCGGGCCCTGTTGACCACCATCACCAGCGGCAGGGAGATCATCAAGCAGACCGAAGAAGGACTCAGCAGGACAACCCTGCCCGAACTGGGAGGTGACGCATCCTCAGTGAAATGGAAGCAGTCGACCCTGGACACCAACAAGCAGGCCGTCAGCTCGCAGATCGCGGCCATGAACGCGGCCACGGCGCAGGTCGTCACCCTCACCGCCGGTCCAACCGAAGAGGTAGACCACACAGCAGTGGGTGCCGCCATCACGACCATCACCAGCAACCTGCCGGAAGTGACGCGCGGGGTCAGGATGATCGCAGCCCTCATGGACGACTCCGACAACGGAGACAGACTGTTGGACGCCACCAGGAAACTTTGCACCGCGTTCACCGACCTGCTGAAGGCGGCCGAGCCGGAAACGAAGGAGCCGCGCCAGAACCTGTTGAACGCAGCCTCCAGGGTCGGGGAGGCGTCCACGTCCGTGCTGTACACCATCGGGGAGGAGACCGAGGAGGACAAGCAGACGCAGGTAACCGAGCCGGATAAAAAGAAAAAATCCTTCCTCTACAGGAAACTCAATTACTGCTACGACAACTTCTACAACGTCTTCTTTAGTAAGGACAAGTTCGGAGATGATTTCGACGATGGTAGAGTAGACGACGGCGTGTATGAGGACGTCGACGTCACCAGGACCTGGGGCCTGGACGCCATCCAGGAGGAATCCGATAGTGACTACTACAGAAGCCTGGCCTACTGCGACGCCGTGCTACGCCCCGGAAGGCCGGCCAACTTCCACAACAACCGCACTGATGACGCGGACCTAGAGTCCATCATAGGGACGTGCGTCGATTATCTCGATAAGAAAATCGATAACAAAACCGAATTGAATAACAGCGACAGCGATTACGAACCGATAGGCTTCGCGCCCGGCCGCCCCCCGCGACCCCCGCCGACGGTCACGGACAAGATATACAACTTCAAAAATGATTTTTCTAATCACGACTACGCTAACGTAAACTACGACCCGCCGAAACACGACTACTCCAGCGTCAACCTCCACCGCCGGACCAAAAACGATATATTGAGGCAACGGTTCTTTCTATCGAACAATATCGATAAAAACGATATAAACGATCGATTCAATCGATACAAGGATAAGAAGATCGAATGTCACAGCATCAGGAACGACGTCACCAAATCCGGTCCCGACGTGAGCGTGGCCGGCGCTCTGAACCTCAAAATCCTAAACCCGGATAGATACAACCGGGTGCTGACGACGAAGGAGACGTTCTACGAGGAATCCGAAGCCAGCTTCACTAAGACGAGCCTATCGAAACTAAAGAACGATCGCTTCGAGAATTTTGTTAAGAAAAGCGAGAAGTACTACACTAGTAGTGACGGTAGCGACCGCAAAACAGAAATCTTAAATAATTCCGAGGGACAACTTAGACCCAAAACGGAGATACGCATCGTGTACAACCCGACGTTCCGCGTGCGGGGCGGACACGACCGCGGCGCCCGCCCGTGCTCGTCTCCCAGATTTCACCTCATGATCCTGTCATGGGTGATGTCTGGATTGATTAATATTATTATAGGGTTGATGGACATCCTTCTGTCTCTCGCCAAAGCCGTAGCCAACACGACGGCAGCTTTAGTGTTGAAAGCGAAGAACGTGGCGGCCCAGTGCCGGGACGACCAGCAGCTGCAGAACAACATCATAGCCGCGGCCACGCACTGCGCCCTGGCCACCAGCCAGCTCGTGGCCTGCGCCAAGGTGGTGGCGCCCACCCTGCACAGCGCGGCGTGTCGCGAGCAGCTGACGAGCGCGGCGCGGCAAGTGGCGCAGGCCGTGGACCGGCTGGTGGAGGCCTGCGCGCCCGCACCGGCCGCGGCGGCGCCCGCGCGCGACCAGCTCGCCGCCGCCGCGCACTGCGTCTCCGAGGAGCTGGAGAGGCTGCTGGCCCACTGTCAACTTGAGCGCGGGGGCGCGGCGGCGGCGGCGGGGCGCGCGGTGGAGGCGGTGCTGGGCGCGCACGAGCGGCTGCTGGCGGCCGCCGGGCCAGCCGACATGCTGCGCCACGCCAGGCAGCTGGGACACGCCACGGCGCTGCTCATCACCAACATCAAGACCGAGGCCGAGGAGTCACCGTCGGACTCCCAGCGCAAGCTCCTAGCCGCCGCCAAGCTGCTGGCCGACGCCACGGCCCGCATGGTGGAGGCGGCCCGCCAGTGCGCCTCCTCGCCACAGGATCGGGAGAAGCAAGAGGTGCTCCGCAAAGCGGCGGAGGAGCTGCGCTTCATCACGGCCGACTACGCGCAGGGACAGGACATCGTCGGCTCACAAGTGGCCAGGCTGCAGGAAAGCGCCCGGCAGGCGACGTCCAGCGCCACGCAGCTGATAACGTCGGCCCAGAACGCAACGCAGTACAACACCAACAGATACTCTCAGGAGACCCTTCTAGAAGAGTGCAAAGTGCTGAACGAGCACCTCCCCCGCATGGTGGAAGCCGTGAACGTGTCCAACGTGAAGCCGACGCAGGCAGCGGCCAGGCTCGACCTCATCTCTGCATCTGAAGCCTTCTTACAGCCAAGTGGCCACGTGATCTCAGCAGCCCGAGGCGCCCTGCCGACCGTAAGCGAGCCCTCCGCAGCCAAGCACCTGGCCGACAACACGCAGCTCTACACTTCAAGCTGCGCCGACCTCAGGTCCGCAGTGAGCAGAGCCAGGATATCCTGCAAGGGCTTGGAGCTGGACGCAGCGGCGGAGATCATCAAATCCCTGCAAGAGGAGCTTGATGAGCTGGAGGAGGCGGTCAGGGCTTTCGACCTGAAACCCTTACCCGGGCAGACGGCGGAGTGGGCCGCGGCCACCATGAACTCCGCGTCCCGCGCCGCCGCCAGCTCCACCGCGCGCCTCGTGTCCGGCGCCAGCGGCTCCCACGCCGCGCCCGACCTCGCGCACGCGCTGCGGGACTTCACGCACGGGCTGCGCGCCGCCGCCGCCGCCGCGCCGCCTCCCCGCGCGCACAGAGTGATATCATCAGGGCGGCAGGTCCTGTACTCGTCCCTGACCCTCGTGGAGACGGTCAAGAAGCAGATCAGCAGCTCGGAGCAGGTGGACAGCGCCGCGCTCGCCTCCATAGCCAAGGACATCACGCACGGTCTAGAGCAGACGATGGAAGCGGTTCCGTCTCACACAGAGCTGGACCTCGCCATGGAGAACATCAACGAGACCCTCAACATTCTGAACATGGGCGAGTTCCCGCCCACGGACAGCTCCTATGGGGAACTCCAAGTCCAGCTGAACTCGGCGGCAGCAGGCCTCAGCCAGGCCTCGTCGGCCGTGGTGCAGAGCGTGGACGACCCCCGGACCCTGGCGGACTCCAGCCACAGCTTCGGACAGGCCTTCAACAATCTGCTCGGAGTCGGCATGGAGATGGCTGGACAAACTGAGGACCGCGAGACTCAGTCGTTGATGGTGAACTCCATGAAGTCGGTGACCGTCAACTCCTCCAAGCTCCTCGGGACAGCGAAGTCCGTCAGCCAGGACTTATCCCGCCCGAACGCCAAGAACCAGCTGACGGCCGCCGCCCGCGCCGTCACCGACAGCATCAACAAGCTGGTGGACGCGTGCACGCAGGCGGCGCCGGGACACAAGGCGTGCGGCGCGGCGCGGCGCAGCGTGCAGGCCGCGCGCCCGCTGCTGGACGCGCCCGCGCAGCCGCTCTCCGACCTCTCCTACTTCGCGTGTCTGGACGCCGTGCTCGACCACAGCAAGCAGCTCAGTGAGTGA

Protein

MATLSLKISIDGGKVVKTIQFEPSTTVYDACRIIREKILEATAGDPKEYGLFLASEEDNKKGIWLEASRSLDYYMLRNGDLLEYNKKTRNLRVRMLDGTVKTLLVDDSQIVANLMVVICTKIGITNYDEYGLVREEQKEEPDPCEKPNYGTLTLKRKHQEKERDAKMEQLRKKLRTDDEVNWVEGSLTLREQGVEAGETLLLRRKLFYSDRNVDSRDPVQLTLLYVQARDAILAGAHPTTQEKACEFAGIQCQIQFGDHREDKHTPGFLDLKEFLPASYVKVKGIEKKVFREHKKHVGLSELDAKVLYTKTARDLKTYGVAFFLVKEKMKGKNKLVPRLLGVTKDSVLRLDEKTKEILQTWPLTTVRRWCASPNTFTLDFGDYSDQYYSVQTTEAEQILQVIAGYIDIIVRKQRAKEHLGIEGDEGSAMLEDSVSPSKANIIQHDTFKSGKVNTESVAKPAVHRPGAEGAKPFAVGHVTGAQLTTVSGQVVTGHAPPAASQVQQTKVTSILTEPQRALLTTITSGREIIKQTEEGLSRTTLPELGGDASSVKWKQSTLDTNKQAVSSQIAAMNAATAQVVTLTAGPTEEVDHTAVGAAITTITSNLPEVTRGVRMIAALMDDSDNGDRLLDATRKLCTAFTDLLKAAEPETKEPRQNLLNAASRVGEASTSVLYTIGEETEEDKQTQVTEPDKKKKSFLYRKLNYCYDNFYNVFFSKDKFGDDFDDGRVDDGVYEDVDVTRTWGLDAIQEESDSDYYRSLAYCDAVLRPGRPANFHNNRTDDADLESIIGTCVDYLDKKIDNKTELNNSDSDYEPIGFAPGRPPRPPPTVTDKIYNFKNDFSNHDYANVNYDPPKHDYSSVNLHRRTKNDILRQRFFLSNNIDKNDINDRFNRYKDKKIECHSIRNDVTKSGPDVSVAGALNLKILNPDRYNRVLTTKETFYEESEASFTKTSLSKLKNDRFENFVKKSEKYYTSSDGSDRKTEILNNSEGQLRPKTEIRIVYNPTFRVRGGHDRGARPCSSPRFHLMILSWVMSGLINIIIGLMDILLSLAKAVANTTAALVLKAKNVAAQCRDDQQLQNNIIAAATHCALATSQLVACAKVVAPTLHSAACREQLTSAARQVAQAVDRLVEACAPAPAAAAPARDQLAAAAHCVSEELERLLAHCQLERGGAAAAAGRAVEAVLGAHERLLAAAGPADMLRHARQLGHATALLITNIKTEAEESPSDSQRKLLAAAKLLADATARMVEAARQCASSPQDREKQEVLRKAAEELRFITADYAQGQDIVGSQVARLQESARQATSSATQLITSAQNATQYNTNRYSQETLLEECKVLNEHLPRMVEAVNVSNVKPTQAAARLDLISASEAFLQPSGHVISAARGALPTVSEPSAAKHLADNTQLYTSSCADLRSAVSRARISCKGLELDAAAEIIKSLQEELDELEEAVRAFDLKPLPGQTAEWAAATMNSASRAAASSTARLVSGASGSHAAPDLAHALRDFTHGLRAAAAAAPPPRAHRVISSGRQVLYSSLTLVETVKKQISSSEQVDSAALASIAKDITHGLEQTMEAVPSHTELDLAMENINETLNILNMGEFPPTDSSYGELQVQLNSAAAGLSQASSAVVQSVDDPRTLADSSHSFGQAFNNLLGVGMEMAGQTEDRETQSLMVNSMKSVTVNSSKLLGTAKSVSQDLSRPNAKNQLTAAARAVTDSINKLVDACTQAAPGHKACGAARRSVQAARPLLDAPAQPLSDLSYFACLDAVLDHSKQLSE

Uniprot

A0A194PUE4

Pubmed

26354079

EMBL

KQ459593 KPI96374.1

Proteomes

UP000053268

Pfam

PF09141   Talin_middle        + More
PF16511   FERM_f0
PF01608   I_LWEQ
PF09379   FERM_N
PF00373   FERM_M
PF08913   VBS

Interpro

IPR035964   I/LWEQ_dom_sf        + More
IPR000299   FERM_domain
IPR015009   Vinculin-bd_dom
IPR015224   Talin_cent
IPR019748   FERM_central
IPR036723   Alpha-catenin/vinculin-like_sf
IPR030224   Sla2_fam
IPR011993   PH-like_dom_sf
IPR036476   Talin_cent_sf
IPR018979   FERM_N
IPR002558   ILWEQ_dom
IPR037438   Talin1/2-RS
IPR035963   FERM_2
IPR019749   Band_41_domain
IPR032425   FERM_f0
IPR014352   FERM/acyl-CoA-bd_prot_sf

SUPFAM

SSF109885   SSF109885        + More
SSF47220   SSF47220
SSF47031   SSF47031
SSF109880   SSF109880

Gene 3D

1.20.80.10 2.30.29.30

CDD

cd12150 talin-RS
cd14473 FERM_B-lobe

ProteinModelPortal

A0A194PUE4

PDB

3IVF E-value=3.93008e-148, Score=1352

KEGG

101737442 K06271 talin | (RefSeq) talin-1

GO

GO:0001726 GO:0005925 GO:0007155 GO:0005856 GO:0005200 GO:0051015 GO:0007016 GO:0005158 GO:0003779 GO:0016021

PANTHER

PTHR10407

Length:

1774

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.55189000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00033

outside

1 - 1774

Pi

273.45636

Theta

180.562406

Tajima's D

1.983299

CLR

0.498672

CSRT

0.880605969701515

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
31250652	GNNQGSVLSFVSIR	100.00	5e-07
28556443	GALPTVSEPSAAK	100.00	5e-07
26280517	QATKDAGTISGINVMR	95.65	5e-07
28467696	QATIGDVNIAQPSGIVESAK	95.65	5e-07
28467696	ACAITVADTARPGDPQPPIAPTTGEASIANIDSIR	100.00	5e-07
26822097	IVEACAPAPAAAAPAR	100.00	8e-06
26280517	FIPSFITVEEMR	100.00	8e-06
28467696	FISTITPQEMPMATR	100.00	8e-06
26822097	AVANTTAAIVIK	100.00	1e-04
26280517	MNPDMDDDEKGK	100.00	1e-04
28467696	MVDVNISK	100.00	1e-04
26822097	EAVIPAIR	100.00	0.001
26280517	TINVPCMDAEAIKK	100.00	0.001
28467696	TIPYWNNVIVPQIK	100.00	0.001

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree