SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00983
Pre Gene Modal
BGIBMGA001366
Annotation
PREDICTED:_uncharacterized_protein_LOC106141659_isoform_X2_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.58
 

Sequence

CDS
ATGGGGGAAGGGCACCCAATGTATCGTCGCCTAGTATCACGAAAACATTTAGAAATATTAGTCAAATACATGGAAAAATACCCAGTTTTAGCCCTCTCCTGTGCACGATCCAGGGAAGAAGTGATCGAAGCCAGGAAAATATGGGAAAAAATAGCGCAAAGCTTAAACAAAGTTGATGAAAAAGTTTACAAAACCGGTTGCAAATGGTCGCGGTATTGGGCGGATTGGAAATTTAAAATACGAAGAAAATATATTTGTCTGAAGAAATGCCAGTCCAATGGGGTTGCTTGCTCAGTACGTCTCTCTCCGTATGAGCAAAAGGTCATCAAGATACTGACGGATGAGGAGGGGAATTTACTCTCTCCGAGCGCTCTGAGTCACATAAGTCTGTTTCAGGAATCAGAGGGGGCTCGGTCAAAATCAACAAATCACTGCGGCATCGATGATTCTGATGATGAAGAACATATTGACTCATTAGCAAATAACAATGAAGAAATTATACATATTGAGTATGCAGATATTAAACCGAATTTATCGCAAGATCCAATTGAACTTGACCACGATAGGAAGAGCTTAGAGGAGTTAAGGAGAGATTTATTAAAGTTTGAACTGAAGAAGCAGAGAGAGTTGTTTGAGATCGAGAAGAGAGAGAGGAGGGAGAAACATGAGTTGGAAGTATCAATTTTGAGGTTAAGAAAGCAGTTGCTAATGAAACAGATTGACTCATAA
Protein
MGEGHPMYRRLVSRKHLEILVKYMEKYPVLALSCARSREEVIEARKIWEKIAQSLNKVDEKVYKTGCKWSRYWADWKFKIRRKYICLKKCQSNGVACSVRLSPYEQKVIKILTDEEGNLLSPSALSHISLFQESEGARSKSTNHCGIDDSDDEEHIDSLANNNEEIIHIEYADIKPNLSQDPIELDHDRKSLEELRRDLLKFELKKQRELFEIEKRERREKHELEVSILRLRKQLLMKQIDS

Summary

Pfam
PF13873   Myb_DNA-bind_5
Interpro
IPR028002   Myb_DNA-bind_5        + More
IPR026753   NAIF1       

Ontologies

Topology

Length:
242
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.07083
outside
1  -  242
 
 

Population Genetic Test Statistics

Pi
315.393412
Theta
193.936442
Tajima's D
2.594028
CLR
0
CSRT
0.954052297385131
Interpretation
Uncertain
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