Gene

KWMTBOMO00976

Annotation

PREDICTED:_mucin-2-like_[Amyelois_transitella]

Location

Bomo_Chr2(-):7724967-7726077      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.992

CDS

ATGGAGAAAACCGAAAATACAATTGAAATCCCTATTGAGTGCAAGGCTCCAGCGGAGGAACAGAGAGAAGGAGACGAAAGTAGAACTACAGAAAGTACAGACACTGAATGTGATGATAATGATATCACATATATTCCAGAAGCTTCTTCAGTAAGTGACTCATATGACAGTTTTTCTGAAACAGCATCAGAACCAGAACCTTCATTATTAGAATTGAATCAGGATATTCCAAACAAGCGAGTGAGAAAAATACCTGATAGATTTAGCTATAGTCACTTATGTATTGCAGAATCAGATGATCAAAATATAATGGATATTTCACTCAAGGAAGCTTTAAATGGACCTGAAAGTAAATTTTGGAGATCAAGCATGGAGGAGGAATTAGAATCATTTAAGAAAAATGATGCATGGGAACTTGTGGATAAGCCTCGTGACTCTACAGTAGTGCAGTGCAAATGGGTATTTAAAAAGAAGTATGATAGTGTCGGTAATGTGCGTTATCGTGCTAGATTAGTGGCAAAAGGCTTTTCACAGAAAGCTGGCATAGACTATCATGAAACTTTTTCACCTGTGCTACGTTATACTACTTTAAGATTGTTATTTTCTATAGCAGTAAAACTAGGTTTAGATATACGTCATCTTGATGTCACTACAGCCTTTCTAAATGGTTTTTTGAATGAATCTGTGTATATGCAAAAACCTGTCCTTTATAGAGATTGTAATGATAATGATAACAAAGTATTAAAGCTTAAACGTGCCATATATGGACTTAAGCAATCATCTCGTGCTTGGTATCAGAGAGTTAATGATTACTTAGAGTCTTTAGGATATTTAAAATCTAATTAA

Protein

MEKTENTIEIPIECKAPAEEQREGDESRTTESTDTECDDNDITYIPEASSVSDSYDSFSETASEPEPSLLELNQDIPNKRVRKIPDRFSYSHLCIAESDDQNIMDISLKEALNGPESKFWRSSMEEELESFKKNDAWELVDKPRDSTVVQCKWVFKKKYDSVGNVRYRARLVAKGFSQKAGIDYHETFSPVLRYTTLRLLFSIAVKLGLDIRHLDVTTAFLNGFLNESVYMQKPVLYRDCNDNDNKVLKLKRAIYGLKQSSRAWYQRVNDYLESLGYLKSN

Uniprot

A0A212F5G1   A0A0A9XV68   A0A0A9XY84   A0A146LH62   W4VRP9   W4VRP2   + More
A0A0N1ICY1   A0A2N9I4J9   A0A0A9WCG6   A0A2N9ICF5   A0A2N9H9J3   A0A117NI32   A0A2K3PDJ4   A0A2N9FS65   A0A2N9GKN5   A0A2N9HL59   A0A2N9FZX9   A0A2N9HDC0   A0A2N9GJW7   A0A2N9GR48   A0A2N9ITI6   A0A2N9F0H9   A0A2N9HXB8   A0A2N9IMU9   A0A2N9HH69   A0A2N9FGT3   A0A2N9G4F5   A0A2N9FB28   A0A2N9EVG8   A0A2N9FG19   A0A151SR30   A0A2N9GS00   A0A2N9GG65   A0A2N9J3H7   A0A2N9EY13   A0A2N9G1K0   A0A2N9F135   A0A2N9G9I0   A0A1J3IJ96   A0A2N9FUC8   A0A1Y1IGG8   A0A251UJK4   A0A250X157   A0A2K3KEZ8   A0A1Y1IS38  

Pubmed

22118469    25401762    26823975    26354079    26645680    24500806    + More
28382043    22057054    24865297    28538728   

EMBL

AGBW02010203    OWR48976.1    GBHO01019780    JAG23824.1    GBHO01019781    JAG23823.1    + More
GDHC01011760    JAQ06869.1    GANO01000659    JAB59212.1    GANO01000660    JAB59211.1    KQ460882    KPJ11482.1    OIVN01004680    SPD18741.1    GBHO01038523    JAG05081.1    OIVN01005285    SPD21760.1    OIVN01003414    SPD11066.1    LKAM01000003    KUM49280.1    ASHM01006021    PNY13361.1    OIVN01001114    SPC90048.1    OIVN01002365    SPD03017.1    OIVN01003620    SPD12483.1    OIVN01001336    SPC92838.1    OIVN01003223    SPD09609.1    OIVN01002001    SPC99720.1    OIVN01002225    SPD01801.1    OIVN01006243    SPD28737.1    OIVN01000459    SPC80612.1    OIVN01004260    SPD16354.1    OIVN01006118    SPD25470.1    OIVN01003416    SPD11073.1    OIVN01000817    SPC86004.1    OIVN01001779    OIVN01003965    SPC97547.1    SPD14614.1    OIVN01000702    SPC84305.1    OIVN01000354    SPC78868.1    OIVN01000822    SPC86055.1    CM003613    KYP57192.1    OIVN01002280    SPD02253.1    OIVN01001872    SPC98448.1    OIVN01006344    SPD31070.1    OIVN01000403    SPC79640.1    OIVN01001384    SPC93353.1    OIVN01000452    SPC80504.1    OIVN01001628    SPC96029.1    GEVM01025909    JAU80029.1    OIVN01001171    SPC90720.1    DF237331    GAQ87846.1    CM007895    OTG23274.1    BEGY01000018    GAX76480.1    ASHM01093982    PNX64819.1    DF238519    GAQ93484.1   

Proteomes

UP000007151    UP000053240    UP000236291    UP000075243    UP000054558    UP000215914    + More
UP000232323   

Pfam

PF07727   RVT_2        + More
PF00665   rve
PF13976   gag_pre-integrs
PF13961   DUF4219
PF00098   zf-CCHC
PF00078   RVT_1

Interpro

IPR039537   Retrotran_Ty1/copia-like        + More
IPR036875   Znf_CCHC_sf       
IPR001878   Znf_CCHC       
IPR013103   RVT_2       
IPR036397   RNaseH_sf       
IPR001584   Integrase_cat-core       
IPR012337   RNaseH-like_sf       
IPR025724   GAG-pre-integrase_dom       
IPR025314   DUF4219       
IPR000477   RT_dom       

SUPFAM

SSF57756   SSF57756        + More
SSF53098   SSF53098       

Gene 3D

3.30.420.10    

ProteinModelPortal

A0A212F5G1   A0A0A9XV68   A0A0A9XY84   A0A146LH62   W4VRP9   W4VRP2   + More
A0A0N1ICY1   A0A2N9I4J9   A0A0A9WCG6   A0A2N9ICF5   A0A2N9H9J3   A0A117NI32   A0A2K3PDJ4   A0A2N9FS65   A0A2N9GKN5   A0A2N9HL59   A0A2N9FZX9   A0A2N9HDC0   A0A2N9GJW7   A0A2N9GR48   A0A2N9ITI6   A0A2N9F0H9   A0A2N9HXB8   A0A2N9IMU9   A0A2N9HH69   A0A2N9FGT3   A0A2N9G4F5   A0A2N9FB28   A0A2N9EVG8   A0A2N9FG19   A0A151SR30   A0A2N9GS00   A0A2N9GG65   A0A2N9J3H7   A0A2N9EY13   A0A2N9G1K0   A0A2N9F135   A0A2N9G9I0   A0A1J3IJ96   A0A2N9FUC8   A0A1Y1IGG8   A0A251UJK4   A0A250X157   A0A2K3KEZ8   A0A1Y1IS38  

KEGG

NA   

GO

GO:0008270   GO:0003676   GO:0000943   GO:0015074   GO:0005739  

PANTHER

PTHR11439  

Length:

281

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0212

Exp number, first 60 AAs:

0

Total prob of N-in:

0.07790

outside

1  -  281

 

 

Pi

5.678937

Theta

7.329747

Tajima's D

-0.818587

CLR

0.801395

CSRT

0.174641267936603

Interpretation

Uncertain