SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00973  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001358
Annotation
NA
Location in the cell
Extracellular   Reliability : 1.338 Nuclear   Reliability : 1.645
 

Sequence

CDS
ATGAAGTCAAAATGGTTGTTGCTGTTGGTCGTGGTGGCCGTGACGTATGTCGAAGCTGCTCCTGCTCCTTTGACACTTGACCCAGTTCTAAATACATTAGGCCTTGGTGGTGGTGGTTGTGATGGCGGCCACGGTGGGGGTGGAGATGGAGATAATGGGAACGGTGACGAAGGGGAAGGGGGAGACGATAGAGGCACTGGAGTAGACAACCCTGGTGATGATGGTGATGATGGTGGAGATGGCGGTGGTGACGATGGAAACGATGGTGGAGATGGAGGAGACGGTGGAGATGATGGTGGAGACGAAGGAGAAGGAGGAGACGGCGGTGACGATGGAGGAGATGATGGCGGAGACGAAGGAGATGGAGGAGATGGTGGTGACGAAGGAGAAGGCGGAGATGGTGGAGACAATGGAGAAGGCGGGGATGATGGTGGTGAAGGCGGGGATGATGGTGGTGAAGGGGGAGATGGAGGAGATCGGGATGGAGAAGGCGGAGATGGTGATTGTGAAGGGGGAAATGGCGGAGATGATGGAGACGGAGGAAATGATGGTGGAGACGGCGGAGATGACGGAGGTGACCAAAGAGAAGGTGGAGCAAATGGGGGAGATGGAAATTGCAGCAACTGCCAAAAAGGCAGGCCAGCTGCAGCCGCAGCAGCGGCAGCTGGCGGCGGTGCGGCCGTAGCAGCTGCCGGCGGTAGTGCGGCAGCCGCGGCGGCAGGCAGTGCTTAG
Protein
MKSKWLLLLVVVAVTYVEAAPAPLTLDPVLNTLGLGGGGCDGGHGGGGDGDNGNGDEGEGGDDRGTGVDNPGDDGDDGGDGGGDDGNDGGDGGDGGDDGGDEGEGGDGGDDGGDDGGDEGDGGDGGDEGEGGDGGDNGEGGDDGGEGGDDGGEGGDGGDRDGEGGDGDCEGGNGGDDGDGGNDGGDGGDDGGDQREGGANGGDGNCSNCQKGRPAAAAAAAAGGGAAVAAAGGSAAAAAAGSA

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.999769
 
 
Length:
243
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
18.57661
Exp number, first 60 AAs:
14.29381
Total prob of N-in:
0.71990
POSSIBLE N-term signal
sequence
outside
1  -  243
 
 

Population Genetic Test Statistics

Pi
285.636026
Theta
165.43885
Tajima's D
2.31725
CLR
0.933452
CSRT
0.925303734813259
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
24093152 EGFTAIVR 100.00 2e-04
27102218 TIEIMK 100.00 2e-04
24093152 NDGGDGGDDGGDGR 100.00 0.019
27102218 GSPAAAAAAAAGGGAAAAAAGR 100.00 0.019
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号