Gene

KWMTBOMO00965

Pre Gene Modal

BGIBMGA000186

Annotation

PREDICTED:_RING_finger_protein_113A_[Papilio_polytes]

Location

Bomo_Chr2(+):7577899-7585034      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.753

CDS

ATGTCAGACGCCGAAGTGGAAGTACTCAGTACTTTTAAAAAACGTAATATTAAGAATAGGGGTGGCAGAAAACGTAAAACTTCCAGTTCAGAAGAGAAAAACAGCTCGGACTCTGATGAGCAACAAGTAGTTCTACCAACGAAAAGGGTGAACAAACCAAATCCAAACATACAGTCTACAGGAGGTCCGAAGAAATCCAAAATTGATGTAATTGAAGATAATGATGATAGTAATGATGAAGAAAAGACTTCTCAAAGGACAACACTATCGGTTCAACAACAGAGAGAGAATGCAACAGCTACCTATGAATTAGACACAGAAAAGGATAGAGATGCCCAAGCCATCTTTGAGAAGGCTCAGAAGATCAATGAAGAGTTGCACGGACAAGCAGATGATAAGATATATCGTGGGATAAACAACTATGCCCAATATTATAAAAAGAAAGACACTGCAGCTGGTAATGCCAGCTCTGGTCTAGTCAGGAAAGGGCCCATCAGAGCTCCAGCAAACTTGAGGGCCACAGTCAGATGGGATTATCAGCCTGATATATGCAAAGATTATAAGGAGACTGGCTTTTGTGGATTTGGTGATTCATGTAAATTCCTTCACGACCGCTCTGACTACAAACATGGCTGGCAACTGGAACGCGAGGAGCTGGAGACACCGGGACAAGATGGAGATTCAGATTACGAGATCCACAGCGACGAGGAACTACCGTTCAAATGTTTTGTATGCAGAGAGGGATTCACAAATCCTGTTGTTACCAAGTGCAAACACTACTTCTGCGAGAAATGCGCTCTGGAGCAATACAAGAAATCGACCCGTTGTTTCATTTGCAACGCGCAGACCGGCGGCGTGTTCAACCCTGCCAAGGAACTGGAAGCCAAACTGAAGAAGCGACTCAGCGATGACGATGATGATGATGATGATGACGATGAATGA

Protein

MSDAEVEVLSTFKKRNIKNRGGRKRKTSSSEEKNSSDSDEQQVVLPTKRVNKPNPNIQSTGGPKKSKIDVIEDNDDSNDEEKTSQRTTLSVQQQRENATATYELDTEKDRDAQAIFEKAQKINEELHGQADDKIYRGINNYAQYYKKKDTAAGNASSGLVRKGPIRAPANLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQLEREELETPGQDGDSDYEIHSDEELPFKCFVCREGFTNPVVTKCKHYFCEKCALEQYKKSTRCFICNAQTGGVFNPAKELEAKLKKRLSDDDDDDDDDDE

Uniprot

H9ISF9   A0A2H1V911   A0A2H1VRP7   A0A212EUT2   A0A0N1IH54   A0A195EYT7   + More
K7J3C8   A0A232FB86   A0A0M9AA54   A0A195DNH6   F4X5H1   A0A151IIT1   A0A158P2Y6   A0A310SDG9   A0A0L7RCU7   E2C3G3   A0A026WUP0   E9ICQ4   A0A151WYL0   A0A0V0GA93   A0A088AMH0   A0A2A3EHF3   A0A1L8DT35   D6WQ47   A0A023F3Z3   E2AW11   A0A069DRC5   A0A1A9WJ24   A0A0C9R2F7   A0A1B0CIF8   A0A1W4WI72   A0A0J7KM71   A0A1I8MP48   U5EQB8   A0A1Y1KRS9   W5J1M7   A0A2M4BU99   B4LXJ7   T1HQ10   A0A2M4BUC8   A0A2M4BV72   A0A3B0JP12   A0A2L2YPU2   A0A0L0C3L2   A0A146ZNI4   W5N1J2   B0WCM3   W5N1K5   A0A1Q3FAF2   Q8I1B4   A0A093FYG7   A0A091JXD6   A0A1V4JRA4   A0A3P9NYW1   A0A1W5A975   N6U435   A0A3B3CMA6   M4A157   B4GL77   A0A0S7LX61   A0A0T6BAQ0   A0A3B5MGP4   A0A091HR38   J3JYB0   A0A0N8K0U6   G1MSH6   A0A0M4EFE4   A0A1B0AJ70   A0A3B3YH89   A0A3P8RQB3   H2LAW6   A0A3P9H738   F6VTQ5   A0A3P8RMY0   A0A1A7YSN2   C0MJ18   A0A2I4CCA3   A0A2I4D3N0   Q28EQ7   Q67EQ7   A0A1W4VXG6   A0ANM6   A0ANM4   A0ANM3   A0A2M4APW9   A0A1A9UWE2   A0A087T3P2   A0A293MR66   A0ANM8   C0MJ15   A0ANM9   A0A3P9KQ01   Q9VDP8   A0A2M4AP21   A0A2M4ANI4   B4JTI0   Q17K84   B4K9D2  

Pubmed

19121390    22118469    26354079    20075255    28648823    21719571    + More
21347285    20798317    24508170    30249741    21282665    18362917    19820115    25474469    26334808    25315136    28004739    20920257    23761445    17994087    26561354    26108605    15632085    23185243    23537049    29451363    23542700    22516182    20838655    17554307    20431018    19126864    16951084    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17510324   

EMBL

BABH01041508    ODYU01001292    SOQ37307.1    ODYU01004043    SOQ43521.1    AGBW02012310    + More
OWR45243.1    KQ460296    KPJ16282.1    KQ981905    KYN33460.1    NNAY01000520    OXU27882.1    KQ435711    KOX79616.1    KQ980713    KYN14382.1    GL888716    EGI58327.1    KQ977459    KYN02568.1    ADTU01007645    KQ762882    OAD55374.1    KQ414615    KOC68678.1    GL452320    EFN77501.1    KK107099    QOIP01000005    EZA59678.1    RLU23153.1    GL762354    EFZ21618.1    KQ982649    KYQ52982.1    GECL01001147    JAP04977.1    KZ288248    PBC31138.1    GFDF01004550    JAV09534.1    KQ971354    EFA06922.1    GBBI01002556    JAC16156.1    GL443213    EFN62433.1    GBGD01002454    JAC86435.1    GBYB01007024    GBYB01007026    GBYB01007027    GBYB01007028    JAG76791.1    JAG76793.1    JAG76794.1    JAG76795.1    AJWK01013293    LBMM01005645    KMQ91339.1    GANO01003336    JAB56535.1    GEZM01077514    JAV63288.1    ADMH02002165    ETN58117.1    GGFJ01007519    MBW56660.1    CH940650    EDW66781.1    ACPB03013617    GGFJ01007518    MBW56659.1    GGFJ01007517    MBW56658.1    OUUW01000008    SPP83974.1    IAAA01030378    IAAA01030379    LAA09450.1    JRES01000953    KNC26836.1    GCES01018423    JAR67900.1    AHAT01023013    DS231889    EDS43674.1    GFDL01010480    JAV24565.1    AY190949    CM000070    AAO01057.1    EAL29016.1    KL215026    KFV62955.1    KK533726    KFP28796.1    LSYS01006700    OPJ74575.1    APGK01050197    KB741168    KB632313    ENN73352.1    ERL92157.1    CH479185    EDW38301.1    GBYX01141246    JAO94049.1    LJIG01002534    KRT84406.1    KL217652    KFO97587.1    BT128234    AEE63195.1    JARO02002268    KPP73121.1    CP012526    ALC46891.1    AAMC01006111    AAMC01006112    HADW01019888    HADX01010942    SBP33174.1    FM245340    CAR93266.1    BC161277    CR848120    AAI61277.1    CAJ83833.1    AY363113    AAR97526.1    AM294264    AM294268    AM294269    FM245335    FM245336    CAL26168.1    CAL26172.1    CAL26173.1    CAR93261.1    CAR93262.1    AM294262    CAL26166.1    AM294261    FM245330    CAL26165.1    CAR93256.1    GGFK01009451    MBW42772.1    KK113260    KFM59731.1    GFWV01018655    MAA43383.1    AM294266    CAL26170.1    FM245337    CAR93263.1    AM294267    CAL26171.1    AE014297    AY051847    AM294265    FM245331    FM245333    FM245334    AAF55742.1    AAK93271.1    CAL26169.1    CAR93257.1    CAR93259.1    CAR93260.1    GGFK01009209    MBW42530.1    GGFK01009018    MBW42339.1    CH916373    EDV95070.1    CH477227    EAT47101.1    CH933806    EDW15564.1   

Proteomes

UP000005204    UP000007151    UP000053240    UP000078541    UP000002358    UP000215335    + More
UP000053105    UP000078492    UP000007755    UP000078542    UP000005205    UP000053825    UP000008237    UP000053097    UP000279307    UP000075809    UP000005203    UP000242457    UP000007266    UP000000311    UP000091820    UP000092461    UP000192223    UP000036403    UP000095301    UP000000673    UP000008792    UP000015103    UP000268350    UP000037069    UP000265000    UP000018468    UP000002320    UP000001819    UP000053875    UP000190648    UP000242638    UP000192224    UP000019118    UP000030742    UP000261560    UP000002852    UP000008744    UP000261380    UP000054308    UP000034805    UP000001645    UP000092553    UP000092445    UP000261480    UP000265080    UP000001038    UP000265200    UP000008143    UP000192220    UP000192221    UP000078200    UP000054359    UP000265180    UP000000803    UP000001070    UP000008820    UP000009192   

PRIDE

H9ISF9    A0ANM6    A0ANM4    A0ANM3    A0ANM8    A0ANM9    + More
Q9VDP8   

Pfam

PF00642   zf-CCCH        + More
PF01607   CBM_14

Interpro

IPR039971   CWC24-like        + More
IPR036855   Znf_CCCH_sf       
IPR000571   Znf_CCCH       
IPR001841   Znf_RING       
IPR013083   Znf_RING/FYVE/PHD       
IPR017907   Znf_RING_CS       
IPR036508   Chitin-bd_dom_sf       
IPR002557   Chitin-bd_dom       

SUPFAM

SSF90229   SSF90229        + More
SSF57625   SSF57625       

Gene 3D

3.30.40.10    

ProteinModelPortal

H9ISF9   A0A2H1V911   A0A2H1VRP7   A0A212EUT2   A0A0N1IH54   A0A195EYT7   + More
K7J3C8   A0A232FB86   A0A0M9AA54   A0A195DNH6   F4X5H1   A0A151IIT1   A0A158P2Y6   A0A310SDG9   A0A0L7RCU7   E2C3G3   A0A026WUP0   E9ICQ4   A0A151WYL0   A0A0V0GA93   A0A088AMH0   A0A2A3EHF3   A0A1L8DT35   D6WQ47   A0A023F3Z3   E2AW11   A0A069DRC5   A0A1A9WJ24   A0A0C9R2F7   A0A1B0CIF8   A0A1W4WI72   A0A0J7KM71   A0A1I8MP48   U5EQB8   A0A1Y1KRS9   W5J1M7   A0A2M4BU99   B4LXJ7   T1HQ10   A0A2M4BUC8   A0A2M4BV72   A0A3B0JP12   A0A2L2YPU2   A0A0L0C3L2   A0A146ZNI4   W5N1J2   B0WCM3   W5N1K5   A0A1Q3FAF2   Q8I1B4   A0A093FYG7   A0A091JXD6   A0A1V4JRA4   A0A3P9NYW1   A0A1W5A975   N6U435   A0A3B3CMA6   M4A157   B4GL77   A0A0S7LX61   A0A0T6BAQ0   A0A3B5MGP4   A0A091HR38   J3JYB0   A0A0N8K0U6   G1MSH6   A0A0M4EFE4   A0A1B0AJ70   A0A3B3YH89   A0A3P8RQB3   H2LAW6   A0A3P9H738   F6VTQ5   A0A3P8RMY0   A0A1A7YSN2   C0MJ18   A0A2I4CCA3   A0A2I4D3N0   Q28EQ7   Q67EQ7   A0A1W4VXG6   A0ANM6   A0ANM4   A0ANM3   A0A2M4APW9   A0A1A9UWE2   A0A087T3P2   A0A293MR66   A0ANM8   C0MJ15   A0ANM9   A0A3P9KQ01   Q9VDP8   A0A2M4AP21   A0A2M4ANI4   B4JTI0   Q17K84   B4K9D2  

PDB

6FF7     E-value=8.57904e-81,     Score=763

KEGG

101746764    K13127 RING finger protein 113A | (RefSeq) RING finger protein 113A

GO

GO:0046872   GO:0006030   GO:0008061   GO:0005576   GO:0016874   GO:0034247   GO:0005684   GO:0030182   GO:0043484   GO:0005634   GO:0000398   GO:0008270   GO:0005515   GO:0051287   GO:0007275   GO:0004812   GO:0006418   GO:0004887   GO:0003707   GO:0016021  

PANTHER

PTHR12930  

Length:

313

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00898

outside

1  -  313

 

 

Pi

212.414023

Theta

151.588165

Tajima's D

2.546702

CLR

0.10466

CSRT

0.948852557372131

Interpretation

Uncertain