Silkworm Genome Informatics Database

Gene

KWMTBOMO00956

Pre Gene Modal

BGIBMGA009809

Annotation

PREDICTED:_mucin-2_[Bombyx_mori]

Location

Bomo_Chr2(+):7239276-7246672 View in EpiBrowser

Location in the cell

Extracellular Reliability : 2.362

CDS

ATGTGCGTGAATGGAATCGCATTACCGCTGTTCTGCAGCTCAGGGTTCGAATACGACCCACCTTCTGATTCGTGCGTGAAGATAGCCGAAGGTGGCTGTACTTTAGGACCAATCACGACCACTGTGCAATCAGATACAACTGCAAGTCCTTCAGAAGAAATAACAATTCCTGATAGTATCTCTACGACTACCGTAGAAGCCGCTGCTACGACTCCAACATCAGACCCAGCTGATTCTACTACAGAAGCAGCCGACTCAACTACTGATTCCGCGGTCACTACCGAACCAGTAACGTCTGGTAGTACAGGAATTTATGAAGCAACAACTTCTGATGGCAACAGGCCGACTAGAGACTCTTCTGATGAAGCAACCACTGACATTGAAACCACAGAAGCAGGCACACAGCCAACTGAAACTGCGACTTCAGAAGTAACGAGCACGACTTCTGGAAACTTCGAGACAACCCCACGCTCGATCTGTCCCCCGGGCTGGGTGGGCAATGTGCCCGCTCCGGACCGGTGCGACGCCTTCTATATGTGCACCAGCGGGATCGCCATCCGGCTGTACTGTAGTGAGGGATACGAGTTCGACCCAGCTTCAGACAACTGCGTCCGAATAGCCGAGGGCGGCTGCACGTTTGGACCAACTACAACCAAACTCCCCGACCTGACAACTCCAGACACCGCACAAACGACTGTCGACACTAAAACAACTGAACAAAGTCCAGAATCAACCACTGTCTCTAAAGCGACCACTCAAGCTAATGATGATGAATCAAGGCCAAGTCAAACCGGACACACAACAACAAATACGGGAGCTACTTCTGAAACAACAACTTCTGGTGAAGCCGTTACTTCCGAAACAACACATGCCACTACCTCGGAAGGGGCAGAGGCGACTGGGACCACACAGCGCGAGGAGACCACGACGCCGGCCATATGTCCGCCAGGGTTCATAGGGAACGTGGCCAGTGCCGAGGACTGCAACAAGTTCTACATGTGCACCCTCGGCATCGCCATCCCGCTGTACTGCAGCCAGGGATACGAGTACAGCCCTGGACTCGATACCTGCGTCCGAGTAGCCGAGGGCGGTTGCACGTTAGGACCAACTACAACCAAGCTGCCCGACCTCACAACTTCAGACACCGCACAAACGACTGTCGACGCTAAAACAACCGAACAGAGTCCAGAATCGACCACTGTCTCTAAAGTGACCACCTCGGAAGGAACAGAGGCGACTAGGACCACACAGCGCGAGGAGACCACGACGCCAGCCATCTGTCCACCAGGGTTCATAGGGAACGTGGCCAGTGCTGAGGACTGCAACAAGTTCTACATGTGCACCCTCGGCATCGCCATCCCGCTGTACTGCGGCCAGGGATACGAATACAGCCCTGGACTGGATAGCTGCGTTCCAGTCGGAAGTGGAGGTTGCACGCGCGGGTACTCCGGACCCAACCCGGACCGAGACCCAATGCAGGGGACCAAAGCGGCCAAGCCAATAGAGCTCCCGGAGCACATCCCATCTCTCTGCCCACGAGGTTCTTACGGACGTCTTCCCCATCCAGACCGCTGCGACAGATTCTATCTCTGTAAAGCTGGAGACGCATTCCTCATGAGCTGCTCTGATGGATTCGACTTCGACCCTGGAACACAGAAATGCGTGCAAATGGCCGCCAATGGATGCAGCGCCAAACGAACTAAGGCTATGCTAAACTGA

Protein

MCVNGIALPLFCSSGFEYDPPSDSCVKIAEGGCTLGPITTTVQSDTTASPSEEITIPDSISTTTVEAAATTPTSDPADSTTEAADSTTDSAVTTEPVTSGSTGIYEATTSDGNRPTRDSSDEATTDIETTEAGTQPTETATSEVTSTTSGNFETTPRSICPPGWVGNVPAPDRCDAFYMCTSGIAIRLYCSEGYEFDPASDNCVRIAEGGCTFGPTTTKLPDLTTPDTAQTTVDTKTTEQSPESTTVSKATTQANDDESRPSQTGHTTTNTGATSETTTSGEAVTSETTHATTSEGAEATGTTQREETTTPAICPPGFIGNVASAEDCNKFYMCTLGIAIPLYCSQGYEYSPGLDTCVRVAEGGCTLGPTTTKLPDLTTSDTAQTTVDAKTTEQSPESTTVSKVTTSEGTEATRTTQREETTTPAICPPGFIGNVASAEDCNKFYMCTLGIAIPLYCGQGYEYSPGLDSCVPVGSGGCTRGYSGPNPDRDPMQGTKAAKPIELPEHIPSLCPRGSYGRLPHPDRCDRFYLCKAGDAFLMSCSDGFDFDPGTQKCVQMAANGCSAKRTKAMLN

Uniprot

H9JJV8

Pubmed

19121390

EMBL

BABH01017888 BABH01017889 BABH01017890 BABH01017891

Proteomes

UP000005204

PRIDE

H9JJV8

Pfam

PF01607 CBM_14

Interpro

IPR002557 Chitin-bd_dom + More
IPR036508 Chitin-bd_dom_sf

SUPFAM

SSF57625 SSF57625

ProteinModelPortal

H9JJV8

PDB

6G9E E-value=0.00131172, Score=101

KEGG

101737466 K10955 mucin-2 | (RefSeq) mucin-2

GO

GO:0006030 GO:0005576 GO:0008061 GO:0051287 GO:0007275 GO:0004812 GO:0006418 GO:0004887 GO:0003707 GO:0016021

Length:

572

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.000940000000000002

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.00040

outside

1 - 572

Pi

181.428567

Theta

156.463572

Tajima's D

0.688612

CLR

103.768683

CSRT

0.571371431428429

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics