SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00953  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA009636
Annotation
PREDICTED:_uncharacterized_protein_LOC101736907_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.842
 

Sequence

CDS
ATGTCAACGGGCCGTGGTCGTGGCTACACTGGGCGGCATCAGCTCCGTGAGCCGAGGCCCGGTGATACTGACAGAGAGGAGGAAAAAGCAGTCCGGACACTTTCCGAACTTAGTCCCAGAGCTACTGATGCGAGCAGGGAGTCACAGAGCCGGGACAAGAGGGAGACTGAACAAGATGAGAAACAGGACACTAAGACAAACACAGATGATGCAGTACTCAGTGAATTGCTGCACATTGACGAGCAGTACACACCGTTGCTGACTTTGCTGGAACAGTTTTCTCCTGGTGAAGACGGTATACAGTTCAATAGGAAATTGAGACACTTTGAGACAACCATATCTAGCATGTGCCCTGACGAAACAAGACTTCAACAAGCGTTCGCAACGTTCAGAGCTGCCGCCCTATTGAATTCGGTGACGTGCCGCAAGCTGGCGGCTGTGGGTGCTTCGTTCACGAGACAACAGAGACAGCAGTTGCTACGCGCCTCTCTCCTCAATGTAGTAATGCAGGGAACGTTTTCTAAATTAGATGTGTTGGAACGGGCAAATCCACAATATCTAGTTAACGCCGCCAACCTGATGGGTGATTATTTTGCAGAGGCCAGACTATGCAACGGCAACAAAGTCCACATATTGGCAAGTCCATTACTGCAGTATGTGAGGTCCTTGTTAGCCAGTGATGACGTGAGAGCACATCGGAGTCTCGCCACACAGTTGATGCAAAATGGACGCGAGCTATTGACAGTGTTAGGACAGGAACTAGAAGACTTATCAATCTCTATACGGCTTCGTTTGTTAACACCACCACCTCCCAGCATCATATGGCTGCTACTCTCCGCTGATCTCTGCCTAAACAAATTCTTACCTCTCCCCAATACTCTACAGCAATTTTATGCGGCCCATCTAGAATTATCAACAGACGACACTTACAATGAAGTCACATATGGATCGTGGAAGGAAACTTCAGAGAAGGAAACATTAGCGCAGAATTTATCTCAAGTCATCCTAAATGACGATGCAAAACCCAAACTCAGACCAATATTAGGAGCCGGTGCTGGTCTCTTGAGACAGGAACAAGCAATGTGTGTCAGTCAAGATAACTTTGATACGTGGACAACGAAGAATAGTCTGAGTAAACGATATGATTTAAACAGTTGGAGGCAGGCAGAAGAGGAAAAGAAAGATGATGAACCAGTTTTCAATCCAGCCGTTTTACCACCGAACTATACAAAATACCAGAACCAGTACAAACTCCCTGATGACTATTCAAACTATCTACAACAGGGTGATGGGAATTACATACAGAATCAATTGAACAATGTTAATTTCAATGCTCAAGGTGATTATTTCACGGAAATTAACAATGAAAGACAAACATATGAGAATGAAACTAAAAGTCAAATTGAAGTGAGCGAGTCAGATGTGGAACGCAAGACTGAAAGGGTCAACAGTGAAACCCAGAAATGTAGCAGGAGGCCAGCTGAGAACTGGAGAAAAGAGATAACTGATAATGAAGATACAAACCAAAATAGAATGAAAAATTGGAAGCAAAACAGCAAAGACGGTATCAATGAAGAATACAAGGAGCGGTCTATCTCTAGAAGCTCTAGGGACGGGAAGACAGGGCGAAGGGATAGTGTTGATACGGACTCGTCGGCTGGAAAGCCAGTGCGGAGAAATGTTACAGAGGTACCCAGGAATAAGAAATATTGGGACCACGATGATCGTTGTGACAAAGACTACAGTAGCTAG
Protein
MSTGRGRGYTGRHQLREPRPGDTDREEEKAVRTLSELSPRATDASRESQSRDKRETEQDEKQDTKTNTDDAVLSELLHIDEQYTPLLTLLEQFSPGEDGIQFNRKLRHFETTISSMCPDETRLQQAFATFRAAALLNSVTCRKLAAVGASFTRQQRQQLLRASLLNVVMQGTFSKLDVLERANPQYLVNAANLMGDYFAEARLCNGNKVHILASPLLQYVRSLLASDDVRAHRSLATQLMQNGRELLTVLGQELEDLSISIRLRLLTPPPPSIIWLLLSADLCLNKFLPLPNTLQQFYAAHLELSTDDTYNEVTYGSWKETSEKETLAQNLSQVILNDDAKPKLRPILGAGAGLLRQEQAMCVSQDNFDTWTTKNSLSKRYDLNSWRQAEEEKKDDEPVFNPAVLPPNYTKYQNQYKLPDDYSNYLQQGDGNYIQNQLNNVNFNAQGDYFTEINNERQTYENETKSQIEVSESDVERKTERVNSETQKCSRRPAENWRKEITDNEDTNQNRMKNWKQNSKDGINEEYKERSISRSSRDGKTGRRDSVDTDSSAGKPVRRNVTEVPRNKKYWDHDDRCDKDYSS

Summary

Interpro
IPR016021   MIF4-like_sf       
Gene 3D

Ontologies

GO

Topology

Length:
583
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01857
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00288
outside
1  -  583
 
 

Population Genetic Test Statistics

Pi
249.039781
Theta
156.624495
Tajima's D
1.941286
CLR
0.146306
CSRT
0.876606169691515
Interpretation
Uncertain
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