Silkworm Genome Informatics Database

Gene

KWMTBOMO00943

Pre Gene Modal

BGIBMGA009640

Annotation

PREDICTED:_CTD_small_phosphatase-like_protein_2_[Bombyx_mori]

Location

Bomo_Chr2(-):6929993-6940585 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.756

CDS

ATGCGGTTAAGAAGTAGAAAAAGAGAGCGCCCGCTCTCAACGAAAGCAACATCAAGATCAGCCCAATTAACGAAGTGCATTGTCAAAAGTCTTCCAAAACCAACCAACACTTGGAGGAAGGCATTGAAACACGATACAGTTAAAAATGCCCTATCTGACTATCACTGTGTTACAAGGTCACAGAGATTGAAAACTAGACCAGTGAGAACACCTCGCAGCATGGAAAAGCCAGTGGAAATACATAAACCTCGCCCTAAAATCAAAGATATTCCGAAAAATACTAAACCAATCTTTCAAACAGTGGTTAGGCCTAACAAAGACACAATGACTCCGTCTACTATTATTAAAAAATCACACAATGATAAAGTTTCTACAACAAAGAAGGAGGTTACCACTACCAGAAGTGTTCAGCTACGTCACAGTTCTCTGAACCGTGAATTGAGAAAAAATGAAATATCATCTGCAATCTCTTCTCCTAGGAAAACAAAACGCATTGATAACAAGTCAGTATCATTAAACAATTCACCGATACGCAAAGTCCGTCAAATAGGCTTATCAAGTCCAAAGGCCATCAGCTCGAACAACGAGAGCCCTAAAAAGAAGACTAAGAAAGCACAAACCGAATCTCCCAGTTGGTCAGATGAGAATGACATTACAATGTACGAACCTCACACAACAACCTTTGTTGATTTCCCGACTTCAAAGTCTGAAGGATCTGACTCTGAAAATGTAGAATCATCTGAGCTATGTCTTCCAAATGACTGTTTGAATGATTTCATCGCAATTGCTGACTGTGAGACGCTCATCAATCTGCCGGCTAGCACCGATGAAGATATTAATTATCTGGCTGACAAAGCAGCTAGAGTAATGACAACTGAAAAGGAAGAGAAGAATAATATATCAAGGTCCAACTCAACAGAAAAGAGGCTGTTGAAACGCCGGAAGTCCAGCAATGACTTGGAGATGTATCAGCCAACATCGACAACTGACGACCTGGACCCCTGTACTGAGTTCCTTGCTAATGGAGACAAATATGTCCAGGAGGATCTCTCTGCCCTAGACGAGCGTGATGGGTACGTCCGTTCTTCTGAATGCGAGATATCGTCGACATGCTCCCAGGGCGGCGCCATGGAGCGACTGCGCGCCCTCTCCGCACGGAGCCCCACCACCGCCTTCCTCGCTGGCATTACACACAGCCTCAACGATGACACGCATGCCTGGAATGGCACCGATTTAACAGCAGATGAGTCTTCATTGACTTGTCACGATGAGCAAACGCCCACTGACATTGAGGAGGAAGCAGCCGATGTGATATCGTCATGCAGCAGTCGGGTTGATTGTGAACAGATCTCTTCATGGGTAGATGCCTTTGATCCCTATTTGTTCATTAAACAGTTGCCACCATTGGAGACGGTGGCCACGGGGGCATTACGAGCGCGCTATCCAGCTTTACCACTGAAGACCAGAACCAGCCCTGACTTCAGCTTGGTTTTGGACTTGGACGAGACATTAGTTCACTGTTCCCTTCAAGAGTTGCCAGATGCCAGCTTCCATTTTCCAGTGCTGTTTCAAGATTGTCGTTATACTGTGTTCGTTCGCACGCGGCCTCACTTCGCGGAGTTCCTGTCGCGCGTGTCTCGTCTCTACGAGGTCATACTGTTCACGGCCAGCAAGCGGGTGTACGCGGACCGCCTGCTCAACCTGCTCGACCCCTCCCGCCGCTGGATCAAGTACAGGTTGTTCCGGGAACACTGTCTCCTCGTGAACGGAAACTACGTGAAGGACCTGTCGATCCTGGGCCGCGACCTCCGCAAGACTGTCATCGTCGACAACAGCCCGCAGGCGTTCGGGTATCAGCTGGAGAACGGCATCCCGATAGACAGCTGGTTCGTCGATCGGAGTGACAACGAACTGCTGAAGCTCTTACCATTTCTTGAGCATCTGGCCACGAAAGACGACGTCCGCCCCTACATCAGAGATAAATACAAGCTCTTCAGTTACCTGCCGCCGGACTAA

Protein

MRLRSRKRERPLSTKATSRSAQLTKCIVKSLPKPTNTWRKALKHDTVKNALSDYHCVTRSQRLKTRPVRTPRSMEKPVEIHKPRPKIKDIPKNTKPIFQTVVRPNKDTMTPSTIIKKSHNDKVSTTKKEVTTTRSVQLRHSSLNRELRKNEISSAISSPRKTKRIDNKSVSLNNSPIRKVRQIGLSSPKAISSNNESPKKKTKKAQTESPSWSDENDITMYEPHTTTFVDFPTSKSEGSDSENVESSELCLPNDCLNDFIAIADCETLINLPASTDEDINYLADKAARVMTTEKEEKNNISRSNSTEKRLLKRRKSSNDLEMYQPTSTTDDLDPCTEFLANGDKYVQEDLSALDERDGYVRSSECEISSTCSQGGAMERLRALSARSPTTAFLAGITHSLNDDTHAWNGTDLTADESSLTCHDEQTPTDIEEEAADVISSCSSRVDCEQISSWVDAFDPYLFIKQLPPLETVATGALRARYPALPLKTRTSPDFSLVLDLDETLVHCSLQELPDASFHFPVLFQDCRYTVFVRTRPHFAEFLSRVSRLYEVILFTASKRVYADRLLNLLDPSRRWIKYRLFREHCLLVNGNYVKDLSILGRDLRKTVIVDNSPQAFGYQLENGIPIDSWFVDRSDNELLKLLPFLEHLATKDDVRPYIRDKYKLFSYLPPD

Uniprot

H9JJD9 A0A2H1VHK9 A0A194PTK4 A0A212ER69 A0A2A4ISD2 A0A0L7LRB6 + More

Pubmed

19121390 26354079 22118469 26227816

EMBL

BABH01017858 ODYU01002598 SOQ40315.1 KQ459593 KPI96647.1 AGBW02013105 + More
OWR43977.1 NWSH01007590 PCG62897.1 JTDY01000275 KOB77954.1

Proteomes

UP000005204 UP000053268 UP000007151 UP000218220 UP000037510

PRIDE

H9JJD9

Pfam

PF03031 NIF

Interpro

IPR004274   FCP1_dom        + More
IPR023214   HAD_sf
IPR011948   Dullard_phosphatase
IPR036412   HAD-like_sf

SUPFAM

SSF56784 SSF56784

Gene 3D

3.40.50.1000

ProteinModelPortal

H9JJD9 A0A2H1VHK9 A0A194PTK4 A0A212ER69 A0A2A4ISD2 A0A0L7LRB6 + More

PDB

3PGL E-value=1.01576e-32, Score=352

KEGG

101736637 K17616 CTD small phosphatase-like protein 2 [EC:3.1.3.-] | (RefSeq) CTD small phosphatase-like prote

GO

GO:0016791 GO:0006030 GO:0008061 GO:0005634 GO:0007275 GO:0004812 GO:0006418 GO:0004887 GO:0003707 GO:0016021

Length:

671

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00042

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00306

outside

1 - 671

Pi

351.71745

Theta

172.119018

Tajima's D

3.275546

CLR

0.259786

CSRT

0.988650567471626

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics