Gene

KWMTBOMO00941

Pre Gene Modal

BGIBMGA009641

Annotation

peritrophin_type-A_domain_protein_1_[Mamestra_configurata]

Location

Bomo_Chr2(-):6883183-6889222      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 3.356

CDS

ATGCTATGCAATAGATTTACCGCGGCAGTCCCGGAGTGCCGCACGTGTTTTTTCCGTACCTATACGCTGATAGGTAAAGCCCTTAGTCTCTTGCTGTTGACCGGCGTCGTGTCCTGTGCTGAAAACGCTACAGAGAGCGTGTTCAGGACTTTTAACAAAGTCGATCCCAACTCACTGTCGTGTGACCCAGCGGGACATGTCTTCCTGCTTCTACCACACTTCCGTGACTGCTCGAAGTTCTACATGTGCGCTCACGGGGAAGAAGTGGAATTCAATTGCAACGGCGGCTTGATATTCGATTTCGAGTTGCAGACATGCAACTGGAAATGGGCTACGAATTGTACCCTTCGTGTTGTGAAAGAGGACATCGACACTGAAGGTTCGGGCTTGGGTTCCGGGGAAGAGACCATCGGTATATTTGGTGAAGAAGTAGAAAACGGACCTATAGATATCCTCACAGCAGACTCAGCAGGCACAGTGAGGCCGCTGTCTCCAAGTAATTTGAGGTTCTTCAACCACGAGCTGAACTGCCACAGGGCTGATGCTGCAGCGAAACAAGTGGCTTACAAGGGCGATTGTCAGCGGTACTGGCGGTGCGTGGGCGGCGTGCCTCAAGCCATGTACTGTACGGATGGACTCTTCTTCAACGAGCTGACGCAGCAGTGTGACTTCGAGGCCAACGTCAAGTGCGGCGTGATACCGGACGAGGAGCTACAAGGCGAATTCATTGTGTACAAAAACTAG

Protein

MLCNRFTAAVPECRTCFFRTYTLIGKALSLLLLTGVVSCAENATESVFRTFNKVDPNSLSCDPAGHVFLLLPHFRDCSKFYMCAHGEEVEFNCNGGLIFDFELQTCNWKWATNCTLRVVKEDIDTEGSGLGSGEETIGIFGEEVENGPIDILTADSAGTVRPLSPSNLRFFNHELNCHRADAAAKQVAYKGDCQRYWRCVGGVPQAMYCTDGLFFNELTQQCDFEANVKCGVIPDEELQGEFIVYKN

Uniprot

A0A0F6QDS3   H9JJE0   D5KU16   B6CMG4   A0A2H1WH58   A0A194PZQ3   + More
A0A0N1I8W5   B8ZX09   A0A212F4S2   A0A212ERD9   A0A1E1W2G1   D1MAJ8   A0A2H1V8J7   A0A2A4JPM5   Q86BV0   A0A0L7LSJ1   Q6VAP0   B6CAP5   Q6VAN9   A0A194PZ93   A0A2A4JFF0   A0A2A4JDW5   A0A2A4JEA8   A0A2H1WHD8   I3RQC1   L7X1F1   A0A194RTC3   C4N8D2   C4N881   A0A194RPW9   A0A0Q9WJF7   A0A2A4JAZ3   A0A088BU36   C4N882   E7D2J6   T1IW66   W5JA06   M1EYJ2   A0A2M4DRY4   B5DRI4   B4H8N3   B4H8N2   Q29DL6   A0A0L7KUX8   A0A3M7R512   A0A194PZ97   A0A3B0JLT1   B3NHF6   A0A3B0JRQ1   B4IXM2   B4ITJ6   A0A0C9PYS6   A0A087TZ26   A0A0C9RID9   A0A0M3QWL7   B3NHF5   A0A0J9RUM5   B4QJ31  

Pubmed

19121390    20619269    18760362    26354079    22118469    18362917    + More
20144715    19820115    15475304    26227816    14871618    17994087    20920257    23761445    15632085    30375419    17550304    22936249   

EMBL

KP744646    AKD49097.1    BABH01017856    GU596430    ADE06396.1    EU325564    + More
ACB54954.1    ODYU01008643    SOQ52398.1    KQ459593    KPI96645.1    KQ460280    KPJ16303.1    FM955425    CAW30926.1    AGBW02010314    OWR48745.1    AGBW02013028    OWR44066.1    GDQN01009887    JAT81167.1    GU128106    KQ971357    ACY95489.1    KYB26070.1    ODYU01001235    SOQ37170.1    NWSH01000891    PCG73658.1    AY277403    AAP33177.1    JTDY01000178    KOB78427.1    AY345124    AAR06265.1    EU139126    ABW98673.1    AY345125    AAR06266.1    KQ459585    KPI98363.1    NWSH01001780    PCG70160.1    PCG70161.1    PCG70159.1    ODYU01008691    SOQ52478.1    JQ730735    AFK27934.1    KC108816    AGC94490.1    KQ459896    KPJ19356.1    FJ408730    ACQ65651.1    FJ393548    ACR20468.1    KPJ19360.1    CH940647    KRF84691.1    NWSH01002232    PCG68868.1    KC703970    AHH02588.1    FJ393549    ACR20469.1    HQ012005    ADV03161.1    JH431608    ADMH02002072    ETN59594.1    JF681185    AFD28281.1    GGFL01016138    MBW80316.1    CH379070    EDY74171.1    CH479224    EDW35076.1    EDW35075.1    EAL30398.3    JTDY01005617    KOB66824.1    REGN01004195    RNA18636.1    KPI98368.1    OUUW01000002    SPP76380.1    CH954178    EDV51682.1    SPP76379.1    CH916366    EDV97484.1    CH891711    EDW99709.1    GBYB01006678    JAG76445.1    KK117393    KFM70365.1    GBYB01006676    JAG76443.1    CP012525    ALC44369.1    EDV51681.1    CM002912    KMY99398.1    CM000363    EDX10362.1    KMY99397.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000007151    UP000007266    UP000218220    + More
UP000037510    UP000008792    UP000000673    UP000001819    UP000008744    UP000276133    UP000268350    UP000008711    UP000001070    UP000002282    UP000054359    UP000092553    UP000000304   

PRIDE

H9JJE0   

Pfam

PF01607   CBM_14

Interpro

IPR036508   Chitin-bd_dom_sf        + More
IPR002557   Chitin-bd_dom       

SUPFAM

SSF57625   SSF57625       

ProteinModelPortal

A0A0F6QDS3   H9JJE0   D5KU16   B6CMG4   A0A2H1WH58   A0A194PZQ3   + More
A0A0N1I8W5   B8ZX09   A0A212F4S2   A0A212ERD9   A0A1E1W2G1   D1MAJ8   A0A2H1V8J7   A0A2A4JPM5   Q86BV0   A0A0L7LSJ1   Q6VAP0   B6CAP5   Q6VAN9   A0A194PZ93   A0A2A4JFF0   A0A2A4JDW5   A0A2A4JEA8   A0A2H1WHD8   I3RQC1   L7X1F1   A0A194RTC3   C4N8D2   C4N881   A0A194RPW9   A0A0Q9WJF7   A0A2A4JAZ3   A0A088BU36   C4N882   E7D2J6   T1IW66   W5JA06   M1EYJ2   A0A2M4DRY4   B5DRI4   B4H8N3   B4H8N2   Q29DL6   A0A0L7KUX8   A0A3M7R512   A0A194PZ97   A0A3B0JLT1   B3NHF6   A0A3B0JRQ1   B4IXM2   B4ITJ6   A0A0C9PYS6   A0A087TZ26   A0A0C9RID9   A0A0M3QWL7   B3NHF5   A0A0J9RUM5   B4QJ31  

PDB

6G9E     E-value=0.000248467,     Score=103

KEGG

101740522    no KO assigned | (RefSeq) uncharacterized LOC101740522

GO

GO:0008061   GO:0005576   GO:0006030   GO:0016021   GO:0005634   GO:0007275   GO:0004812   GO:0006418   GO:0004887   GO:0003707  

Length:

247

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

4.35434

Exp number, first 60 AAs:

4.34838

Total prob of N-in:

0.24938

outside

1  -  247

 

 

Pi

212.297394

Theta

138.826418

Tajima's D

1.422798

CLR

0.009154

CSRT

0.769511524423779

Interpretation

Uncertain