SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00931
Pre Gene Modal
BGIBMGA009797
Annotation
segmentation_polarity_homeobox_protein_engrailed_[Bombyx_mori]
Full name
Segmentation polarity homeobox protein engrailed       + More
Homeobox protein engrailed-like      
Location in the cell
Nuclear   Reliability : 4.28
 

Sequence

CDS
ATGGCCTTCGAGGACCGCTGCAGCCCTAGCCAGGCTAACAGTCCGGGACCGGTGACGGGGCGAGTCCCGGCGCCGCACGCCGAGACCCTCGCATACAGCCCGCAGAGCCAGTACACTTGCACCACAATAGAATCGAAGTACGAACGAGGCTCTCCGAACATGACAATTGTGAAGGTGCAGCCTGACTCCCCGCCTCCCAGCCCGGGACGCGGTCAGAACGAGATGGAATACCAGGACTACTATCGCCCTGAAACGCCCGACGTAAAGCCACACTTCAGCCGGGAGGAGCAGAGGTTTGAACTGGACAGATCGAGGGGGCAGCGGCTGCAACCCACCACGCCGGTCGCCTTCTCCATAAACAACATCCTGCACCCTGAGTTCGGCTTGAACGCCATCAGGAAAACGAACAAAATCGAAGGTCCCAAGCCCATTGGACCGAACCACAGTATCCTCTATAAGCCTTACGATTTATCCAAACCGGACTTATCGAAATACGGCTTTGATTATTTGAAGAGTAAGGAAACGAGTGATTGCAACGCTTTGCCGCCTTTAGGAGGGTTGAGGGAGACGGTATCGCAGATCGGCGAACGCTTGTCCAGAGACAGGGAGCCTCCGAAGAGTCTGGAGCAGCAGAAGAGGCCCGACTCCGCGAGTTCCATCGTCTCGTCGACGTCAAGCGGCGCGGTTTCCACCTGCGGAAGCTCGGACGCGAGCTCCATCCAGTCCCAGAGCAACCCTGGCCAGCTGTGGCCAGCCTGGGTATACTGCACCAGATACAGCGACCGACCTAGTTCCGGTGAGTGCAAATTTTAA
Protein
MAFEDRCSPSQANSPGPVTGRVPAPHAETLAYSPQSQYTCTTIESKYERGSPNMTIVKVQPDSPPPSPGRGQNEMEYQDYYRPETPDVKPHFSREEQRFELDRSRGQRLQPTTPVAFSINNILHPEFGLNAIRKTNKIEGPKPIGPNHSILYKPYDLSKPDLSKYGFDYLKSKETSDCNALPPLGGLRETVSQIGERLSRDREPPKSLEQQKRPDSASSIVSSTSSGAVSTCGSSDASSIQSQSNPGQLWPAWVYCTRYSDRPSSGECKF

Summary

Similarity
Belongs to the engrailed homeobox family.
Belongs to the Engrailed homeobox family.
Keywords
Complete proteome   Developmental protein   DNA-binding   Homeobox   Nucleus   Reference proteome   Segmentation polarity protein  
Feature
chain  Segmentation polarity homeobox protein engrailed
EMBL
BABH01017824    M64335    ODYU01000344    SOQ34932.1    NWSH01006213    PCG63590.1    + More
KQ458706    KPJ05484.1    KQ460280    KPJ16309.1    FM995623    CAX36786.1    KJ507636    AHZ31555.1    KJ507624    AHZ31543.1    KJ507643    AHZ31562.1    KJ507640    AHZ31559.1    KJ507632    AHZ31551.1    KJ507626    KJ507629    AHZ31545.1    KJ507646    AHZ31565.1    KJ507627    KJ507630    AHZ31546.1    KJ507623    AHZ31542.1    KJ507641    AHZ31560.1    KJ507625    AHZ31544.1    KJ507635    KJ507637    AHZ31554.1    KJ507645    AHZ31564.1    KJ507633    KJ507634    AHZ31552.1    KJ507618    AHZ31537.1    KJ507628    AHZ31547.1    KJ507648    KJ507649    KJ507650    KJ507651    AHZ31568.1    KJ507652    AHZ31571.1    KJ507620    AHZ31539.1    JTDY01003936    KOB68811.1    KJ507619    AHZ31538.1    KJ507622    AHZ31541.1    KJ507621    AHZ31540.1    KQ459593    KPI96639.1    KJ507639    AHZ31558.1    KJ507638    AHZ31557.1    KJ458803    KJ458827    AHY04072.1    KJ458797    AHY04042.1    KJ507631    AHZ31550.1    KJ458828    AHY04073.1    KJ458822    AHY04067.1    KJ458821    AHY04066.1    KJ458801    AHY04046.1    KJ458799    KJ458800    AHY04045.1    KJ458826    AHY04071.1    KJ458823    AHY04068.1    KJ458825    AHY04070.1    KJ458804    AHY04049.1    KJ458802    AHY04047.1    KJ458798    AHY04043.1    KJ458824    AHY04069.1    KJ458793    AHY04038.1    KJ458794    AHY04039.1    KJ458795    AHY04040.1    KJ458796    AHY04041.1    KJ458829    AHY04074.1    KJ458806    AHY04051.1    KJ458805    AHY04050.1    KJ507642    AHZ31561.1    KJ507653    AHZ31572.1    KJ507644    AHZ31563.1    AK404792    BAM20286.1   
Pfam
PF00046   Homeodomain        + More
PF10525   Engrail_1_C_sig
Interpro
IPR000747   Homeobox_engrailed        + More
IPR001356   Homeobox_dom       
IPR019737   Homoebox-engrailed_CS       
IPR019549   Homeobox-engrailed_C-terminal       
IPR017970   Homeobox_CS       
IPR009057   Homeobox-like_sf       
IPR020479   Homeobox_metazoa       
IPR000047   HTH_motif       
SUPFAM
SSF46689   SSF46689       

Ontologies

Topology

Subcellular location
Nucleus  
Length:
270
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00084
Exp number, first 60 AAs:
0
Total prob of N-in:
0.02740
outside
1  -  270
 
 

Population Genetic Test Statistics

Pi
299.885584
Theta
227.681724
Tajima's D
0.910939
CLR
0.22427
CSRT
0.629618519074046
Interpretation
Uncertain
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