SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00928
Pre Gene Modal
BGIBMGA009645
Annotation
PREDICTED:_zinc_transporter_foi-like_[Bombyx_mori]
Full name
Zinc transporter foi      
Alternative Name
Protein fear-of-intimacy
Protein kastchen
Location in the cell
PlasmaMembrane   Reliability : 1.768
 

Sequence

CDS
ATGTCACATCATTTGGTGACAGTTTGCATGTTTTGTCTACTGTGCGCCGCCCACACTTGCGGCTCCCACGTGGACATACAGACAGATGGAGTCTCGGCACACGAACCGAGGCTCGAGACCACGGACCACATGCCCCTCGAATTAGAAGAGAAAAGGAGGCTGGATTCGAGGAACCGCTACCATCAGAAGCTTCAGAAGATCAGACAGAAGGATCGCTTGAAGAGGGACGCGAAGAATGTCGACCCTGAGTTGTATGTAGCCCAGATATTCGGCATGTACGGGGACGCCGCTAGTATGACCATGAACCTGACCGGCTTCAACAAGATGCTTGAAGAGCTAGACCTGCATAAGCTGATCGATGGTGGCCAAACGACCGACAGCACGGCCTACTTCCACGTTCAGACGTCGAAGGATGAAGAAGTTGTCAGCTGCGTTAACAGTTCAGAACTGGTTACAACGGTGAACACGAGGTTAAAGCCCCACGACCATGGCCACGGTCACGAGGATCACACCCACAGCGACCACGACCACGAACTCCTAATATCCAAAGACACGTTGAGGTCAGTCTGTCCAATATTGCTGTACCAGAAACTAGCAAACACGTCGATAGAACGTTCTGGATGCGTCAAAGAAACGAATCTACTGGTTCGCCACCACCGAGACTTGGAAGAGAAGGAGAACGCGTACACGAAAAACATGTTCGCGGTCTGGCTGTATTCATCCCTGAGCATAACCGCGATCAGCGCCTGTGGTCTCCTAGGCGTGGCGGTCATCCCTGTCATGCACAAGACTTATTATAACCATCTGCTGCAGTTTCTGGTGGCTCTGGCCGTAGGGACGCTGTGCGGGGACGCCTTGCTGCACCTGATGCCTCACGCGATGAGTCCCATGCACGACCACGAGGGCGGTGGACATGCGGTGGCGGAAATGTCGCACGACGACGGAATGTGGAAGGGATTCGCCGCCATGCTGGGCGTTGTGTTCTTCTATTTCACAGAGAAGGGATTAACGGTTGTCGTTGAGTGGAGGAAACGCAGGCAGAAGTTGGAGGAAGACAAACTTCCGACCAGAGTGCGCGTCCTTAAGGACGAGACGGTCGGGGGATGTTCGGGTGGTTCAAAAGCTCCCATAACGAACACAACTTCGAACAGTCTCATGAAGATCTTTAAGCGGGACGAAAAGGGAGATCCCACAACGAAAACTTGCAAGCACAAATACTCTGAATATCCTTATTGTTATGATGAAATCGATACGGATACTCACGACGAGCACCATCTGAGGGACGGTATACCGCCCAGCCCTAAAGCGAAGCACAACTCCGTAAGCGTGGTCTCGTCCAACGCCCTCAATCCTGAGGGCAAAGAGGAACCCACAGCCAAGGACTGGCTGCTGAAAGCCGAGACCACTCCTGCTGTTGTCGAAATGAACAATATCAAACACAAAGAAGACGGGTCCAAGGATCTGAAGGATGGCGGCAGTTACACAGTTATATTGAGGGAACATTCTAGAGCGCACCACGGTCACTCCCATGCCCATGGGCACGTGCACGCTCCACCGTCGTCGATAGCGTCCGTGGCCTGGATGGTGATCATGGGTGACGGCCTCCACAATTTCACAGACGGCATGGCCATTGGCGCAGCGTTCGCATCCAGCATAGCAGGTGGATTCTCGACCGCCATCGCGGTGCTCTGCCATGAACTTCCTCACGAGCTGGGCGATTTCGCGGTGTTACTGAAGGCGGGCATGTCTGTTAAGCGTGCTGTCTGCTACAACATACTGTCGTCGGCTCTGTGCTTGGCGGGGATGGTCTGCGGGGTCCTGGCCGGGCACGCCCCCTCGGCAACCAGGTGGCTATTCGCAGTGGCAGCTGGCATGTTCCTCTACATAGCCCTCGTTGATATGATGCCTGAACTTAGCACGTCTCACAGCAACGAGGGTACGCTATGCCAATGTGTGCTGCAACTGATGGGTCTAGCCAGCGGCATCGGTATAATGCTGGTCATCGCTCTATACGAAGACGACCTCAAAAACCTGTTCGGCTGA
Protein
MSHHLVTVCMFCLLCAAHTCGSHVDIQTDGVSAHEPRLETTDHMPLELEEKRRLDSRNRYHQKLQKIRQKDRLKRDAKNVDPELYVAQIFGMYGDAASMTMNLTGFNKMLEELDLHKLIDGGQTTDSTAYFHVQTSKDEEVVSCVNSSELVTTVNTRLKPHDHGHGHEDHTHSDHDHELLISKDTLRSVCPILLYQKLANTSIERSGCVKETNLLVRHHRDLEEKENAYTKNMFAVWLYSSLSITAISACGLLGVAVIPVMHKTYYNHLLQFLVALAVGTLCGDALLHLMPHAMSPMHDHEGGGHAVAEMSHDDGMWKGFAAMLGVVFFYFTEKGLTVVVEWRKRRQKLEEDKLPTRVRVLKDETVGGCSGGSKAPITNTTSNSLMKIFKRDEKGDPTTKTCKHKYSEYPYCYDEIDTDTHDEHHLRDGIPPSPKAKHNSVSVVSSNALNPEGKEEPTAKDWLLKAETTPAVVEMNNIKHKEDGSKDLKDGGSYTVILREHSRAHHGHSHAHGHVHAPPSSIASVAWMVIMGDGLHNFTDGMAIGAAFASSIAGGFSTAIAVLCHELPHELGDFAVLLKAGMSVKRAVCYNILSSALCLAGMVCGVLAGHAPSATRWLFAVAAGMFLYIALVDMMPELSTSHSNEGTLCQCVLQLMGLASGIGIMLVIALYEDDLKNLFG

Summary

Description
Required for the normal migration of longitudinal and peripheral glial cells. During larval development, required for the migration of the subretinal glia into the eye disk. During embryonic development, also controls the migration of muscle cells toward their attachment sites. Required in the mesoderm for the correct morphogenesis of embryonic gonad and for tracheal branch fusion during tracheal development. Shg may be cooperating with foi to mediate a common mechanism for gonad and tracheal morphogenesis. Acts as a zinc transporter in both yeast and mammalian cells.
Similarity
Belongs to the ZIP transporter (TC 2.A.5) family.
Keywords
Cell membrane   Complete proteome   Developmental protein   Differentiation   Glycoprotein   Ion transport   Membrane   Neurogenesis   Phosphoprotein   Reference proteome   Signal   Transmembrane   Transmembrane helix   Transport   Zinc   Zinc transport  
Feature
chain  Zinc transporter foi
EMBL
ODYU01001445    SOQ37655.1    AGBW02009306    OWR51113.1    KQ460280    KPJ16311.1    + More
KQ459593    KPI96636.1    NWSH01003798    PCG65807.1    JTDY01001278    KOB74313.1    AJWK01011588    AJWK01011589    AJWK01011590    AJWK01011591    GFDF01009428    JAV04656.1    GFDF01009427    JAV04657.1    GFDF01009425    JAV04659.1    GFDF01009426    JAV04658.1    GL445059    EFN60235.1    GBYB01013018    GBYB01013019    JAG82785.1    JAG82786.1    KQ978143    KYM96773.1    KQ976445    KYM86078.1    GECZ01007617    JAS62152.1    GEBQ01031318    GEBQ01029085    GEBQ01028066    GEBQ01007362    JAT08659.1    JAT10892.1    JAT11911.1    JAT32615.1    KQ435970    KOX67797.1    KZ288210    PBC32960.1    KQ982926    KYQ49225.1    NNAY01001826    OXU22795.1    ADTU01026230    KQ414608    KOC69467.1    GL888423    EGI61159.1    KK107046    EZA61713.1    UFQT01000031    SSX18258.1    KQ980794    KYN13035.1    GECZ01025631    JAS44138.1    QOIP01000004    RLU23386.1    GEDC01013280    JAS24018.1    CVRI01000075    CRL08732.1    AXCM01001750    KQ434796    KZC05644.1    NEVH01011907    PNF31148.1    PNF31149.1    GEZM01086504    JAV59279.1    PNF31146.1    PNF31147.1    GFTR01006978    JAW09448.1    GFDL01003387    JAV31658.1    GFDL01003391    JAV31654.1    KQ760512    OAD60051.1    GDKW01002775    JAI53820.1    CH477702    EAT37058.1    AXCN02000347    KQ971354    KYB26289.1    ATLV01011335    KE524664    KFB36009.1    CM000159    EDW93153.1    KRK00986.1    GBHO01023731    GBHO01023730    GBRD01014230    GDHC01016407    JAG19873.1    JAG19874.1    JAG51596.1    JAQ02222.1    CH964101    EDW79546.1    BT024207    ABC86269.1    AE014296    AGB94279.1    AGB94280.1    AHN58010.1    AAF50401.3   
Pfam
PF02535   Zip        + More
PF03388   Lectin_leg-like
Interpro
IPR003689   ZIP        + More
IPR002048   EF_hand_dom       
IPR005052   Lectin_leg       
IPR013320   ConA-like_dom_sf       
SUPFAM
SSF49899   SSF49899       

Ontologies

Topology

Subcellular location
Cell membrane  
SignalP
Position:   1 - 21,         Likelihood:  0.987042
 
 
Length:
680
Number of predicted TMHs:
6
Exp number of AAs in TMHs:
151.69237
Exp number, first 60 AAs:
0.29013
Total prob of N-in:
0.07273
outside
1  -  235
TMhelix
236  -  258
inside
259  -  264
TMhelix
265  -  287
outside
288  -  319
TMhelix
320  -  342
inside
343  -  586
TMhelix
587  -  609
outside
610  -  612
TMhelix
613  -  632
inside
633  -  651
TMhelix
652  -  671
outside
672  -  680
 
 

Population Genetic Test Statistics

Pi
209.145984
Theta
203.05214
Tajima's D
0.216032
CLR
0.526011
CSRT
0.430678466076696
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号