Gene
KWMTBOMO00923
Pre Gene Modal
BGIBMGA009792
Annotation
histone_H1_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 3.831
Sequence
CDS
ATGGAGTCTGACGAATCGGACGCTGAATCTGAAACGCCTTTGCCTAAAGCGACAGCAATGAAGAAAAAACAAACCATCCAAACCGCCGAAGTCTTGATCGAGAAGAAAAGAACAAAAGACATGATTCACGAGGCTCTCGGCGAACTGAAGACCAGAAAAGGCGTTTCATTATACGCCATCAAGAAATACATCACCGAAAAATACAGAGTTGACGCCGACAAAATTAATTATCTAATTAAGAAGCAAATTAAGAACGGCGTAATTGACGGCGCTATCGTACAGACGAAAGGCGTTGGAGCCACTGGCTCGTTCAAACTGGCTCCCATCAAAGAAAAGAAGAAGCAGACCCCACTAATGCAGAATGAAAACGAAAAAGCAGTGAAAGAAAAAAAGAACGCCAATAAAAAGAAAAAAGAAACAGAAAAAAATAAACCGATCCCCGAGGATAACAAACAGAAGCCGGTTCTTCCCAAAGAGAAAATTGTGAAACCGAGAAGCAAGAAGACAGATGAGAATCAATTGAAAATCACGAAAGCGAACACGAAAAAATCGTCGAAAGACAAAATGGCGGCCGGAGAGGCCGCGGACGCGCCGAAAAGAAAAAAAACAAAATCGTCCAAAGACGCGCAAACTCCCGCCAAAAAGAAGTCCATGCTGATGAGAAGGAAAAGCATAGGGAATATTATTAAACCGCCAAAAATGAAACCTAAGGCTCACGATTAG
Protein
MESDESDAESETPLPKATAMKKKQTIQTAEVLIEKKRTKDMIHEALGELKTRKGVSLYAIKKYITEKYRVDADKINYLIKKQIKNGVIDGAIVQTKGVGATGSFKLAPIKEKKKQTPLMQNENEKAVKEKKNANKKKKETEKNKPIPEDNKQKPVLPKEKIVKPRSKKTDENQLKITKANTKKSSKDKMAAGEAADAPKRKKTKSSKDAQTPAKKKSMLMRRKSIGNIIKPPKMKPKAHD
Summary
Similarity
Belongs to the histone H1/H5 family.
Uniprot
Pubmed
Proteomes
Pfam
PF00538 Linker_histone
Interpro
SUPFAM
SSF46785
SSF46785
Gene 3D
CDD
ProteinModelPortal
PDB
5WCU
E-value=0.00116911,
Score=97
Ontologies
GO
Topology
Subcellular location
Chromosome
Nucleus
Nucleus
Length:
240
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00836
Exp number, first 60 AAs:
0
Total prob of N-in:
0.04533
outside
1 - 240
Population Genetic Test Statistics
Pi
298.461051
Theta
178.199727
Tajima's D
2.027999
CLR
0
CSRT
0.888855557222139
Interpretation
Uncertain
