Gene

KWMTBOMO00921

Pre Gene Modal

BGIBMGA009789

Annotation

PREDICTED:_uncharacterized_protein_LOC105842582_[Bombyx_mori]

Location

Bomo_Chr2(+):6359397-6361921      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.015 PlasmaMembrane   Reliability : 2.235

CDS

ATGTATGCTATCGGTCGCAAATATTACCTAGACTTTAGCGTGCTATCAGGTTTCACCTGTTTCATCCTAGGACTTTTAGGTTTCAGATCGAAAAGACACAGGCTGTTACCTAACAGAAATTACGTATCAGGGTACATAGTGCTATCGTCTTTCTCGCTGCTCAGCGCTTTCGGGCTACTTGTTCTGCTGTCGGTACAGCCGAAGTCCGGGACGCCACTGAGCGATATAACATCGGGCGCGGTCTGCGCTGTGTCCGTACTCGCGCTGGGTGTGGCCTGTCTGGGCGCCGTCGTGTCTTACTGCTGCGCGAGCGACCCGCCAGACAACAGAGTCGCCAGTGTACGTTATTGA

Protein

MYAIGRKYYLDFSVLSGFTCFILGLLGFRSKRHRLLPNRNYVSGYIVLSSFSLLSAFGLLVLLSVQPKSGTPLSDITSGAVCAVSVLALGVACLGAVVSYCCASDPPDNRVASVRY

Uniprot

A0A2A4JKR5   A0A194PZN8   A0A0N0PDD5   A0A212ER99   A0A212F998   A0A2H1WAP4   + More
A0A2H1WBD0   A0A1W4X5W6   D6WTL0   A0A067QP58   E0VBN3   A0A2J7QJE2   A0A1Y1LF33   N6TT26   W5JTC1   A0A182FQ45   A0A182JFW5   A0A2S2PVM8   A0A2S2PLU7   J9LQ13   A0A2S2PTW9   A0A1A9XTC9   A0A1B0BUR6   A0A1A9ZZL1   A0A2R7X6A2   A0A1B0FAK6   A0A1A9WN32   A0A1A9VVH6   A0A0K8U5F4   A0A084WR91   A0A182RTH6   A0A182SYV9   A0A034WJX2   A0A182PKS7   A0A182QEV2   A0A0P8XEE5   A0A182VZW3   A0A182NR66   A0A182JNN4   A0A182Y425   A0A182TXK5   A0A340TB89   A0A3F2YUZ7   Q7QCL5   A0A2C9GR32   A0A1I8ML87   A0A1I8PL11   A0A0Q9X7M5   A0A0L0BNG5   B4K8R8   Q8IGV5   Q8IMI5   B4GNL8   I5AMX1   B4LYM4   B4JVA0   B4PMH4   A0A0M4ER74   A0A3B0K593   A0A1B0CVY0   B0W6U8   U4U7M9   A0A1W4W3H5   A0A1J1I7V5   A0A336MFE6   A0A336MCV0  

Pubmed

26354079    22118469    18362917    19820115    24845553    20566863    + More
28004739    23537049    20920257    23761445    24438588    25348373    17994087    25244985    20966253    12364791    14747013    17210077    25315136    26108605    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    17550304   

EMBL

NWSH01001240    PCG72000.1    KQ459593    KPI96630.1    KQ460280    KPJ16318.1    + More
AGBW02013077    OWR44007.1    AGBW02009625    OWR50293.1    ODYU01007412    SOQ50151.1    ODYU01007413    SOQ50152.1    KQ971354    EFA07195.1    KK853098    KDR11400.1    DS235033    EEB10789.1    NEVH01013557    PNF28682.1    GEZM01059376    JAV71498.1    APGK01000719    KB733792    ENN83609.1    ADMH02000547    ETN65979.1    GGMS01000276    MBY69479.1    GGMR01017811    MBY30430.1    ABLF02034782    GGMR01020313    MBY32932.1    JXJN01020885    KK857235    PTY26970.1    CCAG010006883    GDHF01030440    JAI21874.1    ATLV01025994    ATLV01025995    ATLV01025996    ATLV01025997    ATLV01025998    ATLV01025999    ATLV01026000    ATLV01026001    ATLV01026002    KE525404    KFB52735.1    GAKP01003081    JAC55871.1    AXCN02001469    CH902623    KPU72901.1    AAAB01008859    EAA07688.5    APCN01000256    CH964272    KRG00035.1    JRES01001702    KNC20804.1    CH933806    EDW15487.1    BT001576    AAN71331.1    AE014297    BT057990    AAN14235.1    ACM16700.1    CH479186    EDW39344.1    CM000070    EIM52306.1    CH940650    EDW68044.2    CH916374    EDV91420.1    CM000160    EDW99108.1    CP012526    ALC47626.1    OUUW01000005    SPP80111.1    AJWK01031388    AJWK01031389    DS231849    EDS36929.1    KB632194    ERL89899.1    CVRI01000043    CRK96365.1    UFQT01000941    SSX28131.1    UFQT01000930    SSX28056.1   

Proteomes

UP000218220    UP000053268    UP000053240    UP000007151    UP000192223    UP000007266    + More
UP000027135    UP000009046    UP000235965    UP000019118    UP000000673    UP000069272    UP000075880    UP000007819    UP000092443    UP000092460    UP000092445    UP000092444    UP000091820    UP000078200    UP000030765    UP000075900    UP000075901    UP000075885    UP000075886    UP000007801    UP000075920    UP000075884    UP000075881    UP000076408    UP000075902    UP000075903    UP000075882    UP000007062    UP000075840    UP000095301    UP000095300    UP000007798    UP000037069    UP000009192    UP000000803    UP000008744    UP000001819    UP000008792    UP000001070    UP000002282    UP000092553    UP000268350    UP000092461    UP000002320    UP000030742    UP000192221    UP000183832   

PRIDE

Q8IGV5    Q8IMI5   

Pfam

PF10457   MENTAL        + More
PF00307   CH
PF00270   DEAD
PF04408   HA2
PF00271   Helicase_C
PF07717   OB_NTP_bind
PF08336   P4Ha_N
PF13640   2OG-FeII_Oxy_3

Interpro

IPR019498   MENTAL        + More
IPR036259   MFS_trans_sf       
IPR036872   CH_dom_sf       
IPR001715   CH-domain       
IPR027417   P-loop_NTPase       
IPR001650   Helicase_C       
IPR014001   Helicase_ATP-bd       
IPR007502   Helicase-assoc_dom       
IPR002464   DNA/RNA_helicase_DEAH_CS       
IPR011545   DEAD/DEAH_box_helicase_dom       
IPR011709   DUF1605       
IPR013547   Pro_4_hyd_alph_N       
IPR011990   TPR-like_helical_dom_sf       
IPR005123   Oxoglu/Fe-dep_dioxygenase       
IPR006620   Pro_4_hyd_alph       
IPR019734   TPR_repeat       
IPR013026   TPR-contain_dom       

SUPFAM

SSF103473   SSF103473        + More
SSF47576   SSF47576       
SSF52540   SSF52540       
SSF48452   SSF48452       

Gene 3D

1.10.418.10     1.25.40.10    

CDD

cd00014  CH
cd00079  HELICc

ProteinModelPortal

A0A2A4JKR5   A0A194PZN8   A0A0N0PDD5   A0A212ER99   A0A212F998   A0A2H1WAP4   + More
A0A2H1WBD0   A0A1W4X5W6   D6WTL0   A0A067QP58   E0VBN3   A0A2J7QJE2   A0A1Y1LF33   N6TT26   W5JTC1   A0A182FQ45   A0A182JFW5   A0A2S2PVM8   A0A2S2PLU7   J9LQ13   A0A2S2PTW9   A0A1A9XTC9   A0A1B0BUR6   A0A1A9ZZL1   A0A2R7X6A2   A0A1B0FAK6   A0A1A9WN32   A0A1A9VVH6   A0A0K8U5F4   A0A084WR91   A0A182RTH6   A0A182SYV9   A0A034WJX2   A0A182PKS7   A0A182QEV2   A0A0P8XEE5   A0A182VZW3   A0A182NR66   A0A182JNN4   A0A182Y425   A0A182TXK5   A0A340TB89   A0A3F2YUZ7   Q7QCL5   A0A2C9GR32   A0A1I8ML87   A0A1I8PL11   A0A0Q9X7M5   A0A0L0BNG5   B4K8R8   Q8IGV5   Q8IMI5   B4GNL8   I5AMX1   B4LYM4   B4JVA0   B4PMH4   A0A0M4ER74   A0A3B0K593   A0A1B0CVY0   B0W6U8   U4U7M9   A0A1W4W3H5   A0A1J1I7V5   A0A336MFE6   A0A336MCV0  

KEGG

105842582    no KO assigned | (RefSeq) uncharacterized LOC105842582

GO

GO:0016021   GO:0003676   GO:0004386   GO:0005524   GO:0004656   GO:0016702   GO:0005783   GO:0045035   GO:0045747   GO:0005769   GO:0005112   GO:0003007   GO:0005770   GO:0030863   GO:0045746   GO:0005886   GO:0005506   GO:0031418   GO:0005737   GO:0008356   GO:0007422   GO:0007423  

Length:

116

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

64.6005

Exp number, first 60 AAs:

38.65323

Total prob of N-in:

0.09724

POSSIBLE N-term signal

sequence

outside

1  -  9

TMhelix

10  -  28

inside

29  -  40

TMhelix

41  -  63

outside

64  -  75

TMhelix

76  -  98

inside

99  -  116

 

 

Pi

216.662176

Theta

179.739459

Tajima's D

0.616889

CLR

0.049742

CSRT

0.547522623868807

Interpretation

Uncertain