SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00912
Pre Gene Modal
BGIBMGA009782
Annotation
PREDICTED:_uncharacterized_protein_LOC106139416_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.567
 

Sequence

CDS
ATGCACGAGAAACTGAAGAAGCTAGTTTCGTTTTTCGACAAAATCATCGATCCCGAGAAAGTTTTGACGGACATCGGGAAGGGTCGTTGCTCTGAATGCAATCTCGACTCCAATCGTTCGAAAACGGTCACTTTGGACACGACCGCTGATTGTTCGGATGCGTCCGATAAGAAAACCGTGAGCTGCGTCAATCTGCCGCGACGAGGCGCTGGTCGTTGGTCGTCGTTGTCCAGCTCGGAGGCCACCTCCAAAAGCCCCTTTGGCGCGGGCGCCGCTTGTCAAATTTGCGGCGAAAACTTTGACTGCCGTCGTCAATTAAGCCTCCACGTGGACCTAGAGCATCGGGTCCACGATAAGTTTTCAAAGTTCCACAGTTGCGCAGGCATAATCAACTACAGGCCGAGAGTGAACCGCATCGACGTCGTCTCTGAGGACGGGAAAATTAACGTGCAGACTGTCAGCAAACGTCAGTCTTACGTCACTAGCGCTGACACGTCGCTGACGGCCGTCTCCGAAGCGTCCGAGGACTCTGTCAGCTGTGCGCCGTCTGCGAGTCTCGATACTCGAGTGCTTGGTCAAAAGAATTCACCGAGAAAAGGTCCCAATTACAAATGGACCCCGGAAAATCAAATCGTGCGTTCCTAG
Protein
MHEKLKKLVSFFDKIIDPEKVLTDIGKGRCSECNLDSNRSKTVTLDTTADCSDASDKKTVSCVNLPRRGAGRWSSLSSSEATSKSPFGAGAACQICGENFDCRRQLSLHVDLEHRVHDKFSKFHSCAGIINYRPRVNRIDVVSEDGKINVQTVSKRQSYVTSADTSLTAVSEASEDSVSCAPSASLDTRVLGQKNSPRKGPNYKWTPENQIVRS

Summary

Pfam
PF01773   Nucleos_tra2_N        + More
PF07662   Nucleos_tra2_C
Interpro
IPR013087   Znf_C2H2_type        + More
IPR002668   CNT_N_dom       
IPR008276   C_nuclsd_transpt       
IPR011657   CNT_C_dom       

Ontologies

Topology

Length:
214
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.09196
outside
1  -  214
 
 

Population Genetic Test Statistics

Pi
223.643469
Theta
167.838536
Tajima's D
1.230732
CLR
0
CSRT
0.723213839308035
Interpretation
Uncertain
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