Silkworm Genome Informatics Database

Gene

KWMTBOMO00900

Pre Gene Modal

BGIBMGA009656

Annotation

PREDICTED:_uncharacterized_protein_LOC100902684_[Metaseiulus_occidentalis]

Location

Bomo_Chr2(-):6007618-6009404 View in EpiBrowser

Location in the cell

Nuclear Reliability : 1.804

CDS

ATGAATTTCTCGAAGAGAGTGCGCACTAGAATTGTTTGGATTCCTGTAAGGAAGTATCAGAACATAGAATTGGCGGAATTTTCTGTTAATAACGAAGGTATGTGGATCAGGATCGCGGAATTAGTAAACCACGCAGGTCTAAAGCGTTATTATAAATGTAAAGATGTCAATGACGCAGGAGAATCATGCGGAGCCAAACTGTGCGTTGTTATAGACAGTGACACGAAAGAAGCTACTTTATACAAATCCGATAAACACAATCATACAAACGAAAAAACAGAGATCGCTAAAATTAAAACACCAGTAAAGGAATTCATACGAAATTTACGAGCCCAAAACTTGAATGCAAAGGACATTTACAAGAGATTAATGGAGCGGAATGATTTAAAGATTCCCACTTACAATCAAGTGGTGCTGTATATTGATGTTTTGCAACGAGAGATCAAGGATGTTGTTATCGACTTGAGAATGTTGGAGAATTGGCTACAAACACACTCTACCACACTGAAGGAGGAGCACAGAGCTTTTGTTATTTCACATCAAGTATTACACAACAAAAACACATTTTATGCTGTGATCTCAACAAAGCATCTCTTCAAATTGGCAGTCAATGCTGAAGTATATCATTTGGCTACGATGCAGAAATTAGCTTGGAGTAATCTTCCAGCTTTTGTTTTAGGGGCAACAGATAAGAAAGGAAAGTTTCATGCAATATGCATAATTTTATGTGGATCATTAAATTATTATACTTTTAAATTAATTTTTTTCAACATTAGGACAAAAGTTAAAGAATTATTTTGCAAAGAAATGAGGCCTGTTGTAATTGTATCTGATTCTGAGGCTGTTCAAGACGCTTTTGCTGATGTCTTCCAGGTGAAAACTAGAACATGTTGGAGGTATGCACAGAAACAAATCGTCAATCAATTAAAATGGTCCATAAGATCACCGAGACAACTTATGAAGGACTTGAATTTACTAAGATCCGTGACCTGCCCAAGTATCTTTGATGCAGCTTCTGAACTTTTCTTAGAGAAATACGATCATTTAACAACATTCATTGCTTATTTTAAGGAGAAATGGTTGGTCAATGACCGTAAATGGTTCTTAGGGGCAGCTCGACCATCGATACAGACCAATTTTGGATTGCTCAAGTATATAAAACAGATAAAAGATACTTATGATGAGAAATTATGTTTGAGTTTACAGCTACCACAGTTTTTGGATGTTCTTATAAATGTCATAAATGAAATATCAACAGGGTATGCTGCTGATAAAAATATATTTGTGAAAACACAAGAAGTGACAAAAAAAGACTGGATCATTGGTAATGAATGGGTCAAAGGAGCTAAAACGAACATTTTGCTTGTTGATGATAACTACACACATTATGAAGTCACAAATGGAGTGCAGATAGATGATGATGATGATGACAACAAGTGGGTCAGTTTTGATGTTTTTATCAAGAGACATTTTAGTGAGAGTCGTGTTTCAATACCGCTAAATAAACAGCTGTGGTATTTGAGTAAATGTAACTGCCCTACATTTTACAAAACATATAAATGCAAACACATTATCGGTTTATCAATGATGACATGGCCACAATTTAATGAAGACTGTATTGAGATGGAACATGATGTCAATATTTTATAA

Protein

MNFSKRVRTRIVWIPVRKYQNIELAEFSVNNEGMWIRIAELVNHAGLKRYYKCKDVNDAGESCGAKLCVVIDSDTKEATLYKSDKHNHTNEKTEIAKIKTPVKEFIRNLRAQNLNAKDIYKRLMERNDLKIPTYNQVVLYIDVLQREIKDVVIDLRMLENWLQTHSTTLKEEHRAFVISHQVLHNKNTFYAVISTKHLFKLAVNAEVYHLATMQKLAWSNLPAFVLGATDKKGKFHAICIILCGSLNYYTFKLIFFNIRTKVKELFCKEMRPVVIVSDSEAVQDAFADVFQVKTRTCWRYAQKQIVNQLKWSIRSPRQLMKDLNLLRSVTCPSIFDAASELFLEKYDHLTTFIAYFKEKWLVNDRKWFLGAARPSIQTNFGLLKYIKQIKDTYDEKLCLSLQLPQFLDVLINVINEISTGYAADKNIFVKTQEVTKKDWIIGNEWVKGAKTNILLVDDNYTHYEVTNGVQIDDDDDDNKWVSFDVFIKRHFSESRVSIPLNKQLWYLSKCNCPTFYKTYKCKHIIGLSMMTWPQFNEDCIEMEHDVNIL

Uniprot

H9JJF5 A0A226DBB1 A0A226D022 A0A226DU32 A0A1L8DIW7 A0A177B5R4 + More
H9IXQ7 A0A226D5N1 A0A226DW34 A0A3M7PJM1 A0A226EBP5 A0A3M7SUJ3 A0A3M7S8A7 A0A3M7QAT9 A0A0N8ES31 A0A177AZF6

Pubmed

19121390 30375419 26999592

EMBL

BABH01017746 LNIX01000027 OXA42198.1 LNIX01000047 OXA38214.1 LNIX01000012 + More
OXA48207.1 GFDF01007676 JAV06408.1 LWCA01000346 OAF69042.1 BABH01015693 LNIX01000036 OXA39961.1 LNIX01000010 OXA49682.1 REGN01010365 RMZ99193.1 LNIX01000005 OXA54574.1 REGN01000754 RNA39369.1 REGN01001864 RNA32026.1 REGN01006862 RNA08081.1 GDUN01000602 JAN95317.1 LWCA01000709 OAF67250.1

Proteomes

UP000005204 UP000198287 UP000276133

PRIDE

H9JJF5 H9IXQ7

Pfam

PF04434   SWIM        + More
PF10551   MULE
PF00872   Transposase_mut

Interpro

IPR007527   Znf_SWIM        + More
IPR018289   MULE_transposase_dom
IPR001207   Transposase_mutator

ProteinModelPortal

H9JJF5 A0A226DBB1 A0A226D022 A0A226DU32 A0A1L8DIW7 A0A177B5R4 + More
H9IXQ7 A0A226D5N1 A0A226DW34 A0A3M7PJM1 A0A226EBP5 A0A3M7SUJ3 A0A3M7S8A7 A0A3M7QAT9 A0A0N8ES31 A0A177AZF6

KEGG

101738020 no KO assigned | (RefSeq) uncharacterized LOC101738020

GO

GO:0008270 GO:0016021 GO:0004803 GO:0006313 GO:0003677 GO:0005524 GO:0015074 GO:0003676 GO:0005737 GO:0006396 GO:0000166 GO:0004887 GO:0003707

Length:

549

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

11.76813

Exp number, first 60 AAs:

0.0007

Total prob of N-in:

0.50713

outside

1 - 549

Pi

604.719862

Theta

239.689201

Tajima's D

4.89005

CLR

0.136279

CSRT

0.999950002499875

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree