Gene

KWMTBOMO00898

Pre Gene Modal

BGIBMGA009657

Annotation

PREDICTED:_WD_repeat-containing_protein_7_isoform_X2_[Papilio_xuthus]

Location

Bomo_Chr2(-):5946481-5976024      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.523

CDS

ATGCCGGGAACCAATCTAATAGTTCCAGTAGTGCTGTGGGGCAAGCACGCACCCACTCACTGCATCTCCTCAGTATACCTGTCGAGAGATCAAAAGACCCTTGTCACTGGTTGCTACGATGGCCAGATATGTATATGGCAGTCAGATCCGGAAACGCTGAAGATGACTCCGCGGTGTCTGCTTGTTGGTCACACAGCTCCAGTCACATGCCTATCAAGGGCTTCGATTATACAGGATAACAACTTCATAGTGAGCTCATCGGAAGCCGGTGAGATGTGCACTTGGGATTTGGTCGATGGGAAGTGTAGGGAGAGTGTCAAATTGACTCAGGTCCATACGAACATTCAGGCCTATCATATGTGCAATAGTGAGGATCTACGCCTCTTCTGCAACGGCTACTACGCCGAGATACTAATAATGGATCCTTTCTCGTTGGAAATACTGTTCTCTTTGAGCTCAAAGATGAATCCCGATTGGATATCGGCTTTGCACGTGCTGCGTCCGTCGTCACGTAAGGACGATGTTGTCCTCGCGATATCAATCACCGGCACTGTCAAAGTGTGGTCGCTGCTCGGCCACGAGAACAAACAGTCCGAGCCGATATACGAGAACGAATCCAAGCAGATCCGTTGTCTGAACGCGCTCTCGCTGAACTGCTGCGCGTACAACCAGCGCACCGTCCTCATTGTCTGCGCCAAGTACTGCCAGATATACGATGCAGGGGATTTCTCAGTTTTATGCTCGATCCAAGCACCGTCAGGCGAGCGTTGGATGTCAGGGGATTTCCTGGCCCCGGACAGAGTCCTCGTCTGGTCAACCGAAGGCAAGGGATATCTTTATAAGCTACCCGCCAATTCGGTTCCCGATCATAAAGGTTTCCACGGCCCGACTGTGGCCCACGACAGCCCGGTGCTTTTCGGGATATTGTCACATACGGATAATGAGTTACTTTCCTGTCCACCGGCGATGCGTTTCGTGATAACCTCATCAGGAGGACGCCAGCGCAGACTGCTCTTGAGGGGAGACTCGGCCGGAGTTGTCTCAATTTGGAATGTCGACGACGCCGCCACTCCGGACCTCAACAAAGTTAACACGTACGCCCCTCTGGTGCTGACGAGCATGGAAATAGCGTGGTCGGACATGAACCCGAGTCCTGTCGGAATCCTGGACCAACTACACGTCCCTGACGAGTCTGAAATCAAACTGACCGCTTCGATATACCTGATGGCGCTGAACCGCCTCGTGGTCGGCAGGGAGGACGGCTCCATCGTGATCGTGAACGCGACCCACACCGTCCAGCTTCAGCTGCTGCACGGCAGACACCAGCAGCTAGATGATTGGCCACCTCATCAGCTACTGTTGGGTCACAACGGAAGGGTCAATTGCTTGTTGTACCCACACCACGTACACCAGAGGTACGACAGAGCACATCTGGTGTCGGGTGGGATCGACTTCGCGGTCTGCCTGTGGGACCTCTTTAGTGGAAGCCTGCTGCACCGCTTCTGCGTGCACGCCGGAGAAATAGCTCAGCTGATCGTACCCCCCCACAATTGCAGTCCTCGGATCCAGAAATGCATTTGCTCAGTGGCGTCCGACCACAGTGTGACTCTGCTCAGTCTAGCCGAGAGGAAGTGCGTGACGCTGGCCTCTCGGCACCTGTTCCCGGTCGTGACGATAAAGTGGCGACCGGCCGACGACTTCATGGTGGTCGGCTGCAGCGATGGAACCGTCTACGTCTGGCAGATGGAGACGGGACACCTGGACAGAGTGCTGCATGGTATGATAGCCGAAGAGGTCTTGGCTGCTTGCGACGAGACTCTGTCTGATGACCTCGGGGGCTCGATGTCCAGCGGCTCCGGGGACCTGCAGGGCCTGGCCAATCCCGCCGTGCATTTCTTCAGGGGCCTCCGTCACCGGAACCTGACGGCCATGCGCGCGGCCACGCAGCGCGGGCTGGCGGCGCTGCAGCACGCGGGGCCGGCCGCCGCGGGCCCGCTCGCCGCCCCCGCGCGCCCGCGCCCCGCGCCCCTCACCGTGCAGCCCTTCCGCTCCAACCCGAAAGATCCCGAAAGCCACATTCTGTTCTTCGATATCGAGGGTCTGATCGTGGAGCTGCTGAGCGAGGAGTACTCCGCGATGAGTCCGGCCAGTTTGGAGGCCGCCGGCCTGATATCCAGCGAATACATGAAGGCAGCGGCTTTGACCCAGTCTGCGAGTCCTGACGCCACCAAACGCATTTCTGACTTCTTCGGTCGAGTGAAAGACAAGGCCGGCGATATGGAACGTATATTGAAAGAGAAGGACAAGCACGGTATCTTGGCCAAGATGAAGGAGGGCGCGGAAACCGTTCAGACCAAGCTACAGGCGAAAGCGGAACAGTTAAAAAACCACCTCGATAATAAAGAGGTTCCGCTGCGTGCGCTGCAGAAACGGTTAAAGTTTCGCTAA

Protein

MPGTNLIVPVVLWGKHAPTHCISSVYLSRDQKTLVTGCYDGQICIWQSDPETLKMTPRCLLVGHTAPVTCLSRASIIQDNNFIVSSSEAGEMCTWDLVDGKCRESVKLTQVHTNIQAYHMCNSEDLRLFCNGYYAEILIMDPFSLEILFSLSSKMNPDWISALHVLRPSSRKDDVVLAISITGTVKVWSLLGHENKQSEPIYENESKQIRCLNALSLNCCAYNQRTVLIVCAKYCQIYDAGDFSVLCSIQAPSGERWMSGDFLAPDRVLVWSTEGKGYLYKLPANSVPDHKGFHGPTVAHDSPVLFGILSHTDNELLSCPPAMRFVITSSGGRQRRLLLRGDSAGVVSIWNVDDAATPDLNKVNTYAPLVLTSMEIAWSDMNPSPVGILDQLHVPDESEIKLTASIYLMALNRLVVGREDGSIVIVNATHTVQLQLLHGRHQQLDDWPPHQLLLGHNGRVNCLLYPHHVHQRYDRAHLVSGGIDFAVCLWDLFSGSLLHRFCVHAGEIAQLIVPPHNCSPRIQKCICSVASDHSVTLLSLAERKCVTLASRHLFPVVTIKWRPADDFMVVGCSDGTVYVWQMETGHLDRVLHGMIAEEVLAACDETLSDDLGGSMSSGSGDLQGLANPAVHFFRGLRHRNLTAMRAATQRGLAALQHAGPAAAGPLAAPARPRPAPLTVQPFRSNPKDPESHILFFDIEGLIVELLSEEYSAMSPASLEAAGLISSEYMKAAALTQSASPDATKRISDFFGRVKDKAGDMERILKEKDKHGILAKMKEGAETVQTKLQAKAEQLKNHLDNKEVPLRALQKRLKFR

Uniprot

H9JJF6   A0A194R0H8   A0A2A4JZ52   A0A1Y1K5X2   A0A067QWM1   A0A2J7Q6P2   + More
A0A2J7Q6P6   K7IUY9   A0A1E1WFB8   A0A2J7Q6P4   A0A2J7Q6Q6   A0A2J7Q6P8   A0A2J7Q6P3   A0A154NX68   A0A232F2T0   A0A195E576   F4WP01   A0A2A3EI53   E2A854   A0A1Y1K5S4   A0A195EUZ3   A0A0L7R9M4   E2B7B4   A0A0C9QSC0   A0A3L8DV60   A0A084WD89   A0A1S4GWY3   A0A195B974   A0A088ATB4   A0A151WRU5   A0A195CP23   A0A158NPH6   A0A1B6CTQ7   A0A1S4J7T9   Q5TQM2   A0A1B6C6M7   A0A1B6LRM6   A0A1B6LGD1   A0A1B6DM46   A0A1B6BYP8   A0A1Y1K6H9   A0A2J7Q6Q1   A0A2J7Q6N5   A0A1Q3FH64   E0VAC8   D6WQ51   A0A2J7Q6Q2   A0A2J7Q6R6   A0A0K8T9P9   A0A310SFQ4   A0A2J7Q6Q3   A0A182JU60   A0A182WT05   A0A182L1V5   A0A182TLG9   A0A2M4B9A8   A0A2M4A0H3   A0A2M4B982   A0A182XZY3   A0A2M4CTS9   A0A1B6C9P0   W5J4S1   A0A182Q0N8   A0A182MRW4   B0W6Z8   A0A1B6C248   A0A1L8DNJ5   A0A0M4ETH8   A0A1B6KPF7   A0A1B6KFE9   A0A1B6MPX3   A0A1B6LFK9   A0A1B6FXU2   A0A1B6CWJ7   B4L1W6   A0A224XGA0   B4M8B9   W8AI12   A0A1B0FNG5   B4JKW4   A0A1B6EFM4   A0A1W4VRD7   A0A0P4VWE9   A0A0A1XCN5   Q29I31   B4N1L5   B4Q1K4   B3P8T3   A0A182H3E7   A0A0R1E9S3   Q9W543   A0A0K8U841   A0A3B0K9C6   A0A182P4S5   A0A034WAF8   B3MXG8   B4I9L1   A0A0L0CTE4   B4H4K2   A0A1Q3FH73  

Pubmed

19121390    26354079    28004739    24845553    20075255    28648823    + More
21719571    20798317    30249741    24438588    12364791    21347285    20566863    18362917    19820115    20966253    25244985    20920257    23761445    17994087    18057021    24495485    27129103    25830018    15632085    23185243    17550304    26483478    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25348373    26108605   

EMBL

BABH01017739    BABH01017740    BABH01017741    BABH01017742    KQ460890    KPJ11029.1    + More
NWSH01000336    PCG77295.1    GEZM01094194    JAV55818.1    KK853162    KDR10431.1    NEVH01017460    PNF24254.1    PNF24260.1    AAZX01004672    GDQN01005361    JAT85693.1    PNF24259.1    PNF24265.1    PNF24256.1    PNF24255.1    KQ434777    KZC04217.1    NNAY01001187    OXU24819.1    KQ979608    KYN20340.1    GL888243    EGI63932.1    KZ288253    PBC30952.1    GL437497    EFN70366.1    GEZM01094191    JAV55821.1    KQ981965    KYN31712.1    KQ414621    KOC67575.1    GL446154    EFN88399.1    GBYB01003557    JAG73324.1    QOIP01000003    RLU24314.1    ATLV01022956    KE525338    KFB48183.1    AAAB01008964    KQ976542    KYM81086.1    KQ982807    KYQ50395.1    KQ977574    KYN01859.1    ADTU01022546    ADTU01022547    GEDC01020537    JAS16761.1    EAL39674.3    GEDC01028171    JAS09127.1    GEBQ01013672    JAT26305.1    GEBQ01017204    JAT22773.1    GEDC01010608    JAS26690.1    GEDC01030905    JAS06393.1    GEZM01094192    JAV55820.1    PNF24253.1    PNF24257.1    GFDL01008149    JAV26896.1    DS235005    EEB10334.1    KQ971354    EFA06129.2    PNF24264.1    PNF24262.1    GBRD01003710    JAG62111.1    KQ761797    OAD56789.1    PNF24258.1    GGFJ01000472    MBW49613.1    GGFK01000931    MBW34252.1    GGFJ01000473    MBW49614.1    GGFL01004501    MBW68679.1    GEDC01027127    JAS10171.1    ADMH02002110    ETN58931.1    AXCN02000795    AXCM01003104    DS231851    EDS37272.1    GEDC01029706    JAS07592.1    GFDF01006137    JAV07947.1    CP012528    ALC49827.1    GEBQ01026639    JAT13338.1    GEBQ01029832    JAT10145.1    GEBQ01001981    JAT37996.1    GEBQ01017501    JAT22476.1    GECZ01014757    JAS55012.1    GEDC01019399    JAS17899.1    CH933810    EDW07687.1    KRF94136.1    GFTR01008814    JAW07612.1    CH940653    EDW62395.1    KRF80627.1    GAMC01018420    GAMC01018419    JAB88135.1    CCAG010019210    CH916370    EDW00217.1    GEDC01000608    JAS36690.1    GDKW01001577    JAI55018.1    GBXI01006069    JAD08223.1    CH379064    EAL31575.3    KRT06370.1    CH963925    EDW78254.1    CM000162    EDX01445.1    CH954183    EDV45538.2    JXUM01107375    JXUM01107376    JXUM01107377    JXUM01107378    KQ565136    KXJ71294.1    KRK06160.1    AE014298    BT015183    AAF45693.1    AAT94412.1    AHN59268.1    GDHF01029487    JAI22827.1    OUUW01000042    SPP89963.1    GAKP01008194    JAC50758.1    CH902630    EDV38433.1    CH480825    EDW43892.1    JRES01000037    KNC34669.1    CH479209    EDW32753.1    GFDL01008160    JAV26885.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000027135    UP000235965    UP000002358    + More
UP000076502    UP000215335    UP000078492    UP000007755    UP000242457    UP000000311    UP000078541    UP000053825    UP000008237    UP000279307    UP000030765    UP000078540    UP000005203    UP000075809    UP000078542    UP000005205    UP000007062    UP000009046    UP000007266    UP000075881    UP000076407    UP000075882    UP000075902    UP000076408    UP000000673    UP000075886    UP000075883    UP000002320    UP000092553    UP000009192    UP000008792    UP000092444    UP000001070    UP000192221    UP000001819    UP000007798    UP000002282    UP000008711    UP000069940    UP000249989    UP000000803    UP000268350    UP000075885    UP000007801    UP000001292    UP000037069    UP000008744   

PRIDE

H9JJF6    Q9W543   

Pfam

PF00400   WD40

Interpro

IPR017986   WD40_repeat_dom        + More
IPR001680   WD40_repeat       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR019775   WD40_repeat_CS       
IPR036322   WD40_repeat_dom_sf       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR011044   Quino_amine_DH_bsu       
IPR011041   Quinoprot_gluc/sorb_DH       

SUPFAM

SSF50978   SSF50978        + More
SSF50998   SSF50998       
SSF50969   SSF50969       
SSF50952   SSF50952       

Gene 3D

2.130.10.10    

ProteinModelPortal

H9JJF6   A0A194R0H8   A0A2A4JZ52   A0A1Y1K5X2   A0A067QWM1   A0A2J7Q6P2   + More
A0A2J7Q6P6   K7IUY9   A0A1E1WFB8   A0A2J7Q6P4   A0A2J7Q6Q6   A0A2J7Q6P8   A0A2J7Q6P3   A0A154NX68   A0A232F2T0   A0A195E576   F4WP01   A0A2A3EI53   E2A854   A0A1Y1K5S4   A0A195EUZ3   A0A0L7R9M4   E2B7B4   A0A0C9QSC0   A0A3L8DV60   A0A084WD89   A0A1S4GWY3   A0A195B974   A0A088ATB4   A0A151WRU5   A0A195CP23   A0A158NPH6   A0A1B6CTQ7   A0A1S4J7T9   Q5TQM2   A0A1B6C6M7   A0A1B6LRM6   A0A1B6LGD1   A0A1B6DM46   A0A1B6BYP8   A0A1Y1K6H9   A0A2J7Q6Q1   A0A2J7Q6N5   A0A1Q3FH64   E0VAC8   D6WQ51   A0A2J7Q6Q2   A0A2J7Q6R6   A0A0K8T9P9   A0A310SFQ4   A0A2J7Q6Q3   A0A182JU60   A0A182WT05   A0A182L1V5   A0A182TLG9   A0A2M4B9A8   A0A2M4A0H3   A0A2M4B982   A0A182XZY3   A0A2M4CTS9   A0A1B6C9P0   W5J4S1   A0A182Q0N8   A0A182MRW4   B0W6Z8   A0A1B6C248   A0A1L8DNJ5   A0A0M4ETH8   A0A1B6KPF7   A0A1B6KFE9   A0A1B6MPX3   A0A1B6LFK9   A0A1B6FXU2   A0A1B6CWJ7   B4L1W6   A0A224XGA0   B4M8B9   W8AI12   A0A1B0FNG5   B4JKW4   A0A1B6EFM4   A0A1W4VRD7   A0A0P4VWE9   A0A0A1XCN5   Q29I31   B4N1L5   B4Q1K4   B3P8T3   A0A182H3E7   A0A0R1E9S3   Q9W543   A0A0K8U841   A0A3B0K9C6   A0A182P4S5   A0A034WAF8   B3MXG8   B4I9L1   A0A0L0CTE4   B4H4K2   A0A1Q3FH73  

PDB

5NNZ     E-value=1.76792e-07,     Score=136

KEGG

101735716    no KO assigned | (RefSeq) WD repeat-containing protein 7

GO

GO:0016021   GO:0003824   GO:0007035   GO:0035149   GO:0005623   GO:0005515   GO:0005524   GO:0015074   GO:0003676   GO:0005737   GO:0006396   GO:0000166   GO:0004887   GO:0003707  

Length:

815

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02894

Exp number, first 60 AAs:

0.0106

Total prob of N-in:

0.00112

outside

1  -  815

 

 

Pi

255.939387

Theta

157.495083

Tajima's D

1.855203

CLR

0.109216

CSRT

0.858757062146893

Interpretation

Uncertain