SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00892  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA009659
Annotation
cuticular_protein_hypothetical_2_precursor_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.119 PlasmaMembrane   Reliability : 1.268
 

Sequence

CDS
ATGAGAGTTCTGATCCTAGCCGCCGCCTTCCTCGCCTCCGCCGCAGCCGTTCCCTCGGGAGCCCTGCTGGCCGGACACTACAGCCACGGACTCGTGGCTCACGGAGTCGTGGCCCACGGGCTCGCCCCCGCCGCCCCCACCATCTCCCCCGGAGACCTCCACGGCGCCGCCATCGACGCTCACGTTGAGGCCTCCGACCACGTCCGCGCCGCTGCCGACGCCGCCCGTGAATATCACGACCAGGCCGCCGAGATCCACGGCCAAGCCGTCAACGCAGCCGAAGACCACTCCTGGCAGGCGGTCGACGCTGTCAAGACCGTCGAGGCACAGCTGGACGGTGCCGCCGCCGGAGCCGCCCCCGTTCTCGCCAAGCAACTCGCTGGTCACGTAGCCGCCCCCGTGGTCGCCCACGCTGCCTATGGCGTCGCTCCCGTTGTTGCCCACGCTGGATACGCTGCCCCAGTAGCTTATGGTGCTCCAGTGCTCGGACATGCCGCGTACGCTTCCGCCCTCGCCGCCAGCAAGACGGTGGTCTCCCAGTCTCTGACCCAATCCCATCCCGCCCAGATCGCTCCTCTGGTCGCCTACGCCGGCCACGGTCTCGGCTATGCTCACGGACTCACCCACGGACTCGCTCACGGATGGTAA
Protein
MRVLILAAAFLASAAAVPSGALLAGHYSHGLVAHGVVAHGLAPAAPTISPGDLHGAAIDAHVEASDHVRAAADAAREYHDQAAEIHGQAVNAAEDHSWQAVDAVKTVEAQLDGAAAGAAPVLAKQLAGHVAAPVVAHAAYGVAPVVAHAGYAAPVAYGAPVLGHAAYASALAASKTVVSQSLTQSHPAQIAPLVAYAGHGLGYAHGLTHGLAHGW

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.974554
 
 
Length:
215
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
24.10993
Exp number, first 60 AAs:
16.61392
Total prob of N-in:
0.63592
POSSIBLE N-term signal
sequence
outside
1  -  215
 
 

Population Genetic Test Statistics

Pi
241.081592
Theta
190.395875
Tajima's D
0.885733
CLR
0.275476
CSRT
0.626218689065547
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
28467696 EYGVVWAGK 100.00 2e-08
29197581 TVEAQIDGAAAGAAPVIAK 100.00 2e-08
28467696 EQGKSDIIISNVNPNAGVK 95.45 3e-07
29197581 VVSVPEVVK 95.45 3e-07
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