SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00890  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA009660
Annotation
PREDICTED:_dymeclin_[Papilio_machaon]
Full name
Dymeclin      
Location in the cell
PlasmaMembrane   Reliability : 2.842
 

Sequence

CDS
ATGGGAATAACGGTCAGTCAATACTCTGTGCTATCAAGCAATGAGCACTTGATAAAGTTCTGCTCAAGTGAGATAATATGCCCCAACGATCCATTCTGGAATCAGATGTTAGCTTTTAATATCAAACCACCGGGAAGTGCAGAAGAACAACTAATGTTTGATTCTGCAACAGAATCGCTGCTGCAAACATTCGTTCAGAATAATCTGCAGACCGGAAACCTTGGGTCTCTGGTTCAAGTCTTCATTACCAGGGCAACGTTGTTACTGGCGTCTCCGGTCAGTGATAACGTAATGCTCTCTTGGACAACGTTCAACGCGTTGTTCGTCATAAAAGCGGTCATAAAATATTTGGTGGAGATGGTACCTGAATACGAACTGTGTCGGCATCTGGACGCTCAGATCGACAGAAGAACAGGCAACGGTCAGCTCGATAACAAAGACGCTTCGCAGACGCCATCGACACCCTCGAGCCATGAAGCCCACTCACAAACGCCTGAAGTGCAACAATCTCCAAAGCTGACGGCCTCCGAGAGTCGAGTGGAGATCCTCATAGATGCGCTGATAGGGCTCATCATAGATGTGCCTGTTACAGACAACACATACTACTTGCACTTGGAATGCATAAACACGCTGTTAGTGCTGATGTCAATATATATGTTTGCTGAAGTCCACGGACAAGAGAGACTGGTCGAGACTTCGTTGATATACAGAACTCTCTTTCAAGGTCGTTACGGCATGCACGCCCCGCTGCTGGTCAAAACCCTGCTGTTGAATCTGTCGAGCATGTTGGCCGCCCCGCCGAGCATGTTCGGCACGCACGAGGGAGGTAGCGTTCTTATTAATTTGGCGTCCGGCCTCTGGAGCATGCTGTCGTTCACCACGTCCGCCAGACCCACGATATACAGCCACCCGCCGGCGGACCGGCAGGAGTTGCTGCGGAGACTGAACAAGGAGCACCCGGTGGCGAACCAGTCGTGCCTGCTGCTGCTGGCGCTGGCCAACCACTGCATGAACGACGACAACCTGTACAGGAGGTCGTTGCTCTGCTGCGAGGATAGTAGCGAAACGAGTTCGACGACGCCGCAGAAAGACGCCGTGACGTCACAAATCACGCCCCCCCGTATAGACATGGCTGCGCTCCACAGAGCCCTGTGCGGCGCGGCTGGTTGCGAGCACGTGACGCTGCTTCTGTACCTCATGCTGCATTCCTGCCGCCATTACAAGAGCCACGTCAGCGCCACACCACACATTGAAAACCTGATAGTACCGGTGCTTGAGGTGCTGTACAACGCGCCCGAGAACAACTCCCACCACATCTACATGTCGCTGATCATACTGCTGATACTGACCGAAGACGACGCTCTGATTAAGAACGTGCATATGATCACCCTAAAAAACCCGACATGGTACACGGAGAGGACGATATCGGAGATCTCGCTGGGCGGTCTGATGGTGCTGGTCATAATAAGAGCGCTGCAGTACAACATGACACGGGTCCGGGACAAATATTTGCACACGAACTGCTTGGCTGCCGTCGCCAACATGAGCTGTGAATTTAGGAACCTCCATCCGTACGTAGCGCAGAGACTAATATCTCTATTCGAATCATTGACCAAGAGAAGAGCGAGACTGTGCAGCGAGATCGAAGGTGGCGATTTAAATAATTTAGAACTACCGCATCAGTCAGAAGAAAAGACAGAGGAAATTATGGACCACATCAACGTTTTGGATGAAGTCCTGAGGATGCTCTTGGAGATAATAAACTCTTGCCTGGCGCACCAGCTCTCCAACAACCTGAATCTGGTGTACGCGCTGCTGCACAAGCGGAACGTCTTCCAGCAGCATCAGAACCTGCACATCACCCAGAACATAGAGATGGTCATAGGGTACTTCTCGAGTCGCCTCCAGCGTGTGCAGGAGGGCGCCGGCACCGACCTGGGCGTGGCCGAAGTGCTGGCCTGTATCAGGAAGGGCGCTGAACAGTGGTCCAGCGACCGCCTAAAGAAGTTTCCGGACCTGAAGTTCCGTTACGTGGAAGAGGACAAACCGGAAGAGTTCTTCAGCCCGTACGTGTGGAGGTTGATCAGCGGCTGCGGCGGCGTGCACTGGGCGAGCGAGGGCGGAGCCCGGGCGCTCCGCCACCTGCTCGTCTGA
Protein
MGITVSQYSVLSSNEHLIKFCSSEIICPNDPFWNQMLAFNIKPPGSAEEQLMFDSATESLLQTFVQNNLQTGNLGSLVQVFITRATLLLASPVSDNVMLSWTTFNALFVIKAVIKYLVEMVPEYELCRHLDAQIDRRTGNGQLDNKDASQTPSTPSSHEAHSQTPEVQQSPKLTASESRVEILIDALIGLIIDVPVTDNTYYLHLECINTLLVLMSIYMFAEVHGQERLVETSLIYRTLFQGRYGMHAPLLVKTLLLNLSSMLAAPPSMFGTHEGGSVLINLASGLWSMLSFTTSARPTIYSHPPADRQELLRRLNKEHPVANQSCLLLLALANHCMNDDNLYRRSLLCCEDSSETSSTTPQKDAVTSQITPPRIDMAALHRALCGAAGCEHVTLLLYLMLHSCRHYKSHVSATPHIENLIVPVLEVLYNAPENNSHHIYMSLIILLILTEDDALIKNVHMITLKNPTWYTERTISEISLGGLMVLVIIRALQYNMTRVRDKYLHTNCLAAVANMSCEFRNLHPYVAQRLISLFESLTKRRARLCSEIEGGDLNNLELPHQSEEKTEEIMDHINVLDEVLRMLLEIINSCLAHQLSNNLNLVYALLHKRNVFQQHQNLHITQNIEMVIGYFSSRLQRVQEGAGTDLGVAEVLACIRKGAEQWSSDRLKKFPDLKFRYVEEDKPEEFFSPYVWRLISGCGGVHWASEGGARALRHLLV

Summary

Similarity
Belongs to the dymeclin family.
Keywords
Complete proteome   Lipoprotein   Myristate   Phosphoprotein   Reference proteome  
Feature
chain  Dymeclin
EMBL
BABH01017724    BABH01017725    GDQN01002775    JAT88279.1    GDQN01006379    JAT84675.1    + More
KQ460890    KPJ11021.1    KQ459593    KPI96602.1    NWSH01001329    PCG71673.1    GDQN01006261    JAT84793.1    NEVH01014374    PNF27662.1    JXUM01082939    JXUM01082940    JXUM01082941    JXUM01082942    JXUM01082943    KQ563346    KXJ73999.1    CM000157    EDW89425.1    AAAB01008980    EAA14482.2    APCN01001772    GGFM01001393    MBW22144.1    GGFJ01002709    MBW51850.1    GGFJ01002708    MBW51849.1    KA648167    AFP62796.1    CH477681    EAT37306.1    AXCM01001095    AE013599    AF132149    CM002911    KMY92385.1    UFQT01000675    SSX26433.1    ADMH02001451    ETN62523.1    CH954177    EDV59449.1    GGFK01005178    MBW38499.1    CH480816    EDW47019.1    CH933808    EDW08671.1    UFQT01000558    SSX25295.1    CH902619    EDV35945.1    CM000362    EDX06265.1    GDHF01005757    JAI46557.1    AXCN02000686    ATLV01026972    KE525421    KFB53701.1    GAKP01007748    JAC51204.1    CP012524    ALC40482.1    CH940648    EDW59901.1    CCAG010012934    JXJN01011775    JXJN01011776    JXJN01011777    CH916367    EDW01777.1    GFDF01010501    JAV03583.1    GBXI01003481    JAD10811.1    CH964154    EDW79812.1    CM000071    JRES01000930    KNC27216.1    OUUW01000001    SPP73919.1    DS231883    EDS43007.1    GFDL01011827    JAV23218.1    GFDL01011671    JAV23374.1    GDAI01001922    JAI15681.1    GADI01006202    JAA67606.1    GFDL01011769    JAV23276.1    GFDL01011815    JAV23230.1    GFDL01011822    JAV23223.1    GFDL01011761    JAV23284.1    GANO01000181    JAB59690.1    GFDL01011848    JAV23197.1    GFDL01011825    JAV23220.1    GGFK01005458    MBW38779.1    GAMC01014430    JAB92125.1    JXUM01069884    KQ562576    KXJ75561.1    GGFJ01003100    MBW52241.1    GEFH01004037    JAP64544.1    GACK01007331    JAA57703.1    GEDV01005163    JAP83394.1    KQ971354    EFA05864.1    GFPF01004871    MAA16017.1    CH479181    EDW31351.1    GFAA01001532    JAU01903.1    GFAC01005624    JAT93564.1    NNAY01000959    OXU25724.1    GEZM01087549    JAV58619.1    GL762326    EFZ21677.1    KK107148    EZA57439.1    JO842298    AEO33915.1    GBBM01000611    JAC34807.1    ADTU01022919    GL436993    EFN71284.1    GL445235    EFN89994.1    GFWV01019545    MAA44273.1    KQ982652    KYQ52804.1    GFJQ02003380    JAW03590.1   
Interpro
IPR019142   Dymeclin        + More
IPR016024   ARM-type_fold       
SUPFAM
SSF48371   SSF48371       

Ontologies

Topology

Length:
717
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
3.50073000000001
Exp number, first 60 AAs:
0.00016
Total prob of N-in:
0.03965
outside
1  -  717
 
 

Population Genetic Test Statistics

Pi
223.795076
Theta
147.092195
Tajima's D
1.560499
CLR
0.036362
CSRT
0.807409629518524
Interpretation
Uncertain
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