SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00884
Pre Gene Modal
BGIBMGA009773
Annotation
PREDICTED:_KAT8_regulatory_NSL_complex_subunit_2_isoform_X2_[Papilio_xuthus]
Location in the cell
Nuclear   Reliability : 4.717
 

Sequence

CDS
ATGACGTCACAACCTCGTAAATTAATTCACCTGCCCAAAGTCAGGATGCTCAGTAGTGGGGGACCAACAAAATCCGGTATCCGGATAACAAATGTGAGGACTATAAAGCCTCCAGACCCGGAACACGTGAAGAAACAGGAAGAGGAGAAACTGAGGGCTCAGGTCCAAAAGGAGATCGCCTCGCGGTGTCGCTCGTGCGCGTACAAGGGCTACGAATGCTTGCAGCCCGTGCTGTCTGGTCGGCAGTACTGCTACAGACATGTGCTCCGCGACCCGACCGCCCCCTACAGGCAGTGCGTGCACAACTATGCCAACGGGGAGAGGTGTACGTTGCCGGCACCCATGGACACTAATGATCCCCGGGACCCTGGGTTGTGTTTCGAGCACGCCCGCGCCGCCCTCGCCCTCCGCCAGCGCCAGGCCGCGCCCCCTCCGCCCCTCCCCACCACCGAGACGCTGCTCCACCAGCTCAGCCACTACATACAAGCAGAGAGGCCCCGCACGACGTCATGTGCGTCTTCAGTGTCCGTTGTAAGCGACCCATCGGAACCAGAACAGTCTTCTCCGACAGTACTAGATCCATTCAAACAAATAGACGCGAGGTCGGTGAATGCATCGTACTCAGCGTCCATACAAGAGTACTGCAGTGCCTCTGACAGTGACGGTGACAGTGTCAAGCTGGGGGAAAACGGGGAATGTAGCTCGGGGGACGATGAACTCGCACCTGTTGAAGAGCTACCATTATGGCGTGCCGGTGTGTACACCGCCGAAGAAACTGTAAGTGAAGCGAGAAATGCACTAAAACTATTGCAAATGGCGTACGTCAATCAAATGGGGCGTCTCCGGGTGCTGCTACAGATGTCCCGGGCTAAATACGTGAAGGCTCTCAAGGCTGAGAAGGAACACTACTGCAGTATAAACACGCAAACCCGCAACGGTCCGCCCACGGCTCGCGAGAGGAGGCAACTGCGGAAACTGAAGGCCTTTGCTTCATATCACAAGAAACACGGTGTGGATGCTGTGCTCGGCAGGAAGCTACATCATAAGAGAGCCAAAGTCAACGACCCACACCCATCCCGGCCGGTGCCGTCCACGTGTCGCTGCACGTTCTCCGAGGGCGGCGTGCGGTGCCCCGCGCAGGCGCTGCCGGCCGCCAAGCACTGCCTCAAGCATATACTGCACGACAGACATCAAGTAACCTCCCTCAATCCACTATATGAGTCGTCTATTATCAAAGGTGGCAATCTGTGCATTTGGACAAAAAAATGTTATTGA
Protein
MTSQPRKLIHLPKVRMLSSGGPTKSGIRITNVRTIKPPDPEHVKKQEEEKLRAQVQKEIASRCRSCAYKGYECLQPVLSGRQYCYRHVLRDPTAPYRQCVHNYANGERCTLPAPMDTNDPRDPGLCFEHARAALALRQRQAAPPPPLPTTETLLHQLSHYIQAERPRTTSCASSVSVVSDPSEPEQSSPTVLDPFKQIDARSVNASYSASIQEYCSASDSDGDSVKLGENGECSSGDDELAPVEELPLWRAGVYTAEETVSEARNALKLLQMAYVNQMGRLRVLLQMSRAKYVKALKAEKEHYCSINTQTRNGPPTARERRQLRKLKAFASYHKKHGVDAVLGRKLHHKRAKVNDPHPSRPVPSTCRCTFSEGGVRCPAQALPAAKHCLKHILHDRHQVTSLNPLYESSIIKGGNLCIWTKKCY

Summary

EMBL
BABH01017691    BABH01017692    BABH01017693    KQ459593    KPI96597.1    KQ460890    + More
KPJ11016.1    AGBW02014100    OWR42261.1    KQ971352    KYB26724.1    KYB26723.1    GL452274    EFN77645.1    KQ760512    OAD60052.1    KQ435970    KOX67798.1    KQ414608    KOC69466.1    KQ434796    KZC05643.1    AJWK01030744    LBMM01009420    KMQ88149.1    KQ981522    KYN40697.1    GFDF01007227    JAV06857.1    KQ976445    KYM86080.1    ADTU01026230    KQ982926    KYQ49226.1    NNAY01000761    OXU26640.1    GL764659    EFZ17328.1    KQ978143    KYM96774.1    GEZM01016859    GEZM01016857    GEZM01016854    JAV91107.1    AAAB01008960    EDO63959.1    GEZM01016861    JAV91099.1    QOIP01000004    RLU23381.1    GEZM01016860    GEZM01016856    GEZM01016852    JAV91116.1    GEZM01016862    GEZM01016853    JAV91096.1    GEZM01016851    JAV91119.1    GEZM01016855    JAV91110.1    GEZM01016858    JAV91104.1    JXUM01014101    KQ560394    KXJ82637.1    CH477317    EAT43746.1    KQ980794    KYN13034.1    EAA11850.4    APCN01002346    JRES01000141    KNC33876.1    KK107046    EZA61714.1    APGK01034947    KB740923    KB632430    ENN78098.1    ERL95492.1    CCAG010010775    DS233065    EDS27835.1    DS232242    EDS38273.1    ADMH02001932    ETN60455.1    AXCM01001108    GFDL01012882    JAV22163.1    GFDL01012976    JAV22069.1    GFDL01013076    JAV21969.1    KA645006    AFP59635.1    JXJN01005427    UFQT01001144    SSX29134.1    UFQS01000258    UFQT01000258    SSX02126.1    SSX22503.1    ATLV01026739    KE525418    KFB53311.1    AXCN02000584    PYGN01001820    PSN32668.1    DS235361    EEB15203.1    GAKP01007434    JAC51518.1    GDAI01002416    JAI15187.1    GEDC01022356    JAS14942.1    GEDC01012063    JAS25235.1    GEDC01030514    JAS06784.1    CAQQ02089189    GAKP01010468    JAC48484.1    GGFK01004923    MBW38244.1    GGFK01004922    MBW38243.1    GAKP01010469    JAC48483.1    GBXI01010223    GBXI01000583    JAD04069.1    JAD13709.1    GDHF01033554    JAI18760.1    GBXI01006985    JAD07307.1    GBXI01012488    JAD01804.1    GDHF01008394    JAI43920.1    GAMC01005004    JAC01552.1    GAMC01005006    JAC01550.1    GAMC01005005    JAC01551.1    GL445059    EFN60234.1    CH940656    KRF78350.1   
Pfam
PF13891   zf-C3Hc3H
Interpro
IPR025927   Potential_DNA-bd        + More
IPR026316   NSL2       

Ontologies

Topology

Length:
424
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00138
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01217
outside
1  -  424
 
 

Population Genetic Test Statistics

Pi
212.529607
Theta
172.317586
Tajima's D
0.860495
CLR
0.742418
CSRT
0.625718714064297
Interpretation
Uncertain
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