Silkworm Genome Informatics Database

Gene

KWMTBOMO00870

Pre Gene Modal

BGIBMGA009669

Annotation

hypothetical_protein_KGM_07112_[Danaus_plexippus]

Location

Bomo_Chr2(-):5210128-5215592 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.876

CDS

ATGCTCCTGGCTCGCGGAAGATACTTCTGTTCGAACTTAAATCAGTACGTGCTGGAGAATGTTGAGGCTAAGGCTTGCGTTAGAGTTGAAACTACAAACAAATCTATCTCCGGCGTCAAAGTTCCTCACATGGAAGTTGTTGAGTTGGGAGGACCACCGTACAACCATCTTGGGTTGGAGAAGGGAGGCCACACAATCGAAGAAGCGAAGGAGAAGTGGAGGGAGCTGCTGAAGAAAATGATACTGATGGTTCAACAGAGGACTGGCTTTGCCAGGATCGAAGTGGCACATAAAAACGCCACTAAACGAAAGAATGCCCTGATGAAGATCGTCATACCGAAAATAATAGCGAGCGTGAAGTATATTTTAGACGAATTGGAGGAACAAGCCAGAGAAGAGTTTTACAGATTCAAAAAGATTTTGGAAGTTAAGCGGAAACATGCAAAGAAAAAAGCCGAGGCTCTTGAAGCCGAATCTGATATTCCTAAACTAGCTATTGAATCAATAGAAGAAGTAGAAGCAGAAGAAAAAGGAGAAGAAGATGATAAAAATGAAATTTGTGATGACTTACCGGAAAAAGAAGATATCAAAGCAGCGAATCCTGAAGTGGAACTGAAGGTTTCAGAATTGAGAGCACACATTAAGTCAGTAATCGACGTCGGTAAATATATAGAAGAAAAAGGCACATTGTCTATTGATATGAAACAATTTTTGAAAACTGCTGAGCAAGTATTGGATGAAAAGAAAAATAATGAGAGTTTTAATGAAGAAACTGGCGAAAGTATTCAGGAAGTATCCATTGATTATGAGAAAAAAGTCTCCGATAAATCAATAAATGATAGAAATCGTTTAAATGTTACTAGTAGAAGAACGAGCACAACAGAAGCTCTAGGAATTGATAAGCAAACACAAACAGACATGGATGTTGACGGTTATGTTAGTAATCTCAAAGAAATAACAAGAATATTAAGAAAAACCACCGAAGATGGAACCACACTCAAAATTCGCAAGGAAGTTAGCTCTTCCACTAATCCTATCAATGTACCAATAAATAATGGTCCTGTTCTAGCATCCAAGAGCGAGAGTTTCATTTGTAATAGTAGATGTGATGATAACCAATCCTTACAGACTTTCCAAGAAATTGTCTGCAGTCGAATACAATCAGAAGTCATTCCTCTATCATCGAATACAGAAAAGGTAGTGAAGTCTTCAAGCTTAACGTCTTTTGGATCGGATATAGAAAATAATGGTTTTGATGATGAAAATGATTTGGAAGAAATACGAAAGGATTTCAAAGAGCTTTTAGATCTGGCAGGACCGCTCTTTCGGAGGCACGGCGAAGCAAGCGAAGCAAATGATGATAATTTAGAGTTGACGGAATCCGAATGGAAATTAATTGCTAGTATTTTCGAGAACAAAAGCAACACAAAAACTCTTGATAATGCTGATGACAGTCAAAATAATGAAAAATAA

Protein

MLLARGRYFCSNLNQYVLENVEAKACVRVETTNKSISGVKVPHMEVVELGGPPYNHLGLEKGGHTIEEAKEKWRELLKKMILMVQQRTGFARIEVAHKNATKRKNALMKIVIPKIIASVKYILDELEEQAREEFYRFKKILEVKRKHAKKKAEALEAESDIPKLAIESIEEVEAEEKGEEDDKNEICDDLPEKEDIKAANPEVELKVSELRAHIKSVIDVGKYIEEKGTLSIDMKQFLKTAEQVLDEKKNNESFNEETGESIQEVSIDYEKKVSDKSINDRNRLNVTSRRTSTTEALGIDKQTQTDMDVDGYVSNLKEITRILRKTTEDGTTLKIRKEVSSSTNPINVPINNGPVLASKSESFICNSRCDDNQSLQTFQEIVCSRIQSEVIPLSSNTEKVVKSSSLTSFGSDIENNGFDDENDLEEIRKDFKELLDLAGPLFRRHGEASEANDDNLELTESEWKLIASIFENKSNTKTLDNADDSQNNEK

Uniprot

H9JJG8

Pubmed

19121390

EMBL

BABH01017647

Proteomes

UP000005204

PRIDE

H9JJG8

Pfam

PF01813 ATP-synt_D

Interpro

IPR002699 V_ATPase_D

ProteinModelPortal

H9JJG8

PDB

6O7X E-value=1.96745e-07, Score=133

KEGG

101736595 K02149 V-type H+-transporting ATPase subunit D | (RefSeq) uncharacterized LOC101736595

GO

GO:0042626 GO:0006508 GO:0015074 GO:0003676 GO:0005737 GO:0006396 GO:0000166 GO:0004887 GO:0003707 GO:0016021

PANTHER

PTHR11671

Length:

490

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00337

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00209

outside

1 - 490

Pi

322.56285

Theta

196.36551

Tajima's D

1.97615

CLR

0.277924

CSRT

0.879406029698515

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics