Gene

KWMTBOMO00860  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009760

Annotation

coatomer_protein_complex_subunit_zeta_[Bombyx_mori]

Location

Bomo_Chr2(+):4789519-4806136      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.317 Golgi   Reliability : 1.849

CDS

ATGGAAGGTTCTCTGTTCGAACCCACATTGTACATTGTCAAGGGGATGTGCATTTTGGACTATGAAGGAAACAGAATTTTGGCCAAATATTACGATAAAGACGTCCTACCCACAACTAAGGAGCAGAAGGCATTTGAGAAGAACTTGTTCAATAAGACTCACAGAGCAAATGCAGAAATCATAATGCTGGATGGTCTTACTTGTGTTTATAAAAGTAACGTAGATTTATTCTTCTATGTTATGGGAAGCTCCCATGAAAATGAGTTGATCCTTCAATCAGTATTGAATGCACTCTACGAGTCTGTTAGTTTGCTGCTAAGAAGGAACATGGAGCGGAGGGTCCTCATGGAGAACTTGGATGCTGTTATGCTTGCCTTCGATGAGATCTGCGACGGCGGTGTGATATTGGATGCTGATCCCACGTCGATCGTAAGCCGGGCAGCGCTGCGCACCGAGGACGTGCCCCTGGGAGAGCAAACAGTGGCCCAGGTATTGCAATCAGCAAGGGAGCAACTTAAGTGGTCCTTATTGAAATGA

Protein

MEGSLFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEICDGGVILDADPTSIVSRAALRTEDVPLGEQTVAQVLQSAREQLKWSLLK

Uniprot

D2Y4R7   Q2F5X8   I4DNA1   I4DMZ6   A0A194PUC7   A0A1E1WMW9   + More
S4PB31   A0A212ENI6   H9JJQ9   A0A2A4JXX7   A0A2H1V7U4   A0A1E1WJ42   K7J3B5   A0A2H1VUV1   J9HTQ2   A0A023EGZ8   B0W863   A0A158NTZ6   A0A139WEJ8   A0A1L8DVP2   Q16K40   A0A3L8DN81   A0A0C9QIL8   A0A0L7RF57   U5EXW1   A0A1Y1MM58   A0A0J7KYC4   A0A067QZB9   A0A2P8XWI4   A0A0P4VTE4   A0A154P3D0   A0A182WBW8   A0A069DWL2   A0A195FL34   A0A088AC71   A0A0K8U5V1   E9IQ51   A0A0N0U2Y9   A0A182LSV6   A0A182RU48   A0A182K3P4   A0A182T9I0   A0A2A3EP29   V9IGN4   A0A195C7F4   A0A0A9WEI1   A0A182QL23   A0A1W4X0A8   A0A182VDE7   A0A182U1D6   A0A182WXB9   A0A182LKL5   Q7Q5C2   A0A182I4A8   A0A151I4P4   A0A0C9R460   E0VA85   A0A182NIW7   A0A182Y7W5   A0A182IRP8   A0A0T6AX76   A0A0K8R9L9   W8BUQ5   A0A158NTZ7   A0A0A1WQV6   A0A2R5LND1   A0A224YVH4   A0A131Z538   L7M6F0   A0A131XAT0   C4WUX3   A0A023GFJ6   A0A023FG69   A0A336MP29   A0A084WMK8   A0A0K8TSW5   T1JLE9   A0A023FTY2   E9H019   B4LG45   A0A3B0KLW4   B4N3N4   B5DRG2   E2C335   B3M4F3   B4QMW8   Q9VV89   D2NUJ2   A0A151IXJ4   F4WXA4   W5JB88   A0A1W4UUN2   A0A1A9YGX2   A0A1B0BY44   A0A0L0CCL3   A0A023GHX4   B4KXK2   A0A2M3Z7Q5   B4PKB4   B4HJR4  

Pubmed

20967265    22651552    26354079    23622113    22118469    19121390    + More
20075255    17510324    24945155    26483478    21347285    18362917    19820115    30249741    28004739    24845553    29403074    27129103    26334808    21282665    25401762    20966253    12364791    14747013    17210077    20566863    25244985    24495485    25830018    28797301    26830274    25576852    28049606    24438588    26369729    21292972    17994087    15632085    20798317    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    21719571    20920257    23761445    26108605    17550304   

EMBL

GU322820    ADB66739.1    DQ311295    ABD36239.1    AK402796    BAM19391.1    + More
AK402664    BAM19286.1    KQ459593    KPI96578.1    GDQN01002719    JAT88335.1    GAIX01006142    JAA86418.1    AGBW02013642    OWR43048.1    BABH01017599    NWSH01000462    PCG76242.1    ODYU01000881    SOQ36314.1    GDQN01004173    JAT86881.1    ODYU01004292    SOQ44004.1    CH477978    EJY58023.1    JXUM01000854    GAPW01004970    JAC08628.1    DS231857    EDS38688.1    ADTU01026224    KQ971354    KYB26287.1    GFDF01003601    JAV10483.1    EAT34662.1    QOIP01000006    RLU21900.1    GBYB01014593    JAG84360.1    KQ414608    KOC69463.1    GANO01000745    JAB59126.1    GEZM01027394    JAV86762.1    LBMM01002087    KMQ95288.1    KK852811    KDR15905.1    PYGN01001240    PSN36366.1    GDKW01000806    JAI55789.1    KQ434796    KZC05640.1    GBGD01003170    JAC85719.1    KQ981522    KYN40699.1    GDHF01030285    JAI22029.1    GL764659    EFZ17369.1    KQ435970    KOX67801.1    AXCM01000274    KZ288210    PBC32956.1    JR044033    AEY59832.1    KQ978143    KYM96777.1    GBHO01037440    JAG06164.1    AXCN02000476    AAAB01008960    EAA11346.4    APCN01002296    KQ976445    KYM86082.1    GBYB01011089    JAG80856.1    DS235005    EEB10291.1    LJIG01022621    KRT79588.1    GADI01006240    JAA67568.1    GAMC01005877    JAC00679.1    GBXI01012853    JAD01439.1    GGLE01006906    MBY11032.1    GFPF01006828    MAA17974.1    GEDV01002073    JAP86484.1    GACK01006301    JAA58733.1    GEFH01003797    JAP64784.1    ABLF02019447    ABLF02033882    AK341261    AK342301    BAH71693.1    BAH72381.1    GBBM01002794    JAC32624.1    GBBK01003976    GBBK01003975    JAC20507.1    UFQT01000224    UFQT01001316    SSX22031.1    SSX30007.1    ATLV01024481    KE525352    KFB51452.1    GDAI01000375    JAI17228.1    JH431739    GBBL01002039    JAC25281.1    GL732579    EFX74963.1    CH940647    EDW69353.1    OUUW01000012    SPP87569.1    CH964095    EDW79239.1    CH379070    EDY74131.1    GL452274    EFN77651.1    CH902618    EDV40447.1    CM000363    CM002912    EDX10760.1    KMZ00090.1    AE014296    AB037672    AAF49428.2    BAA90485.1    BT120135    ADB57056.1    KQ980828    KYN12417.1    GL888423    EGI61153.1    ADMH02001882    ETN60668.1    JXJN01022478    JRES01000681    KNC29199.1    GBBM01002795    JAC32623.1    CH933809    EDW18688.2    GGFM01003793    MBW24544.1    CM000159    EDW94812.1    CH480815    EDW41791.1   

Proteomes

UP000053268    UP000007151    UP000005204    UP000218220    UP000002358    UP000008820    + More
UP000069940    UP000002320    UP000005205    UP000007266    UP000279307    UP000053825    UP000036403    UP000027135    UP000245037    UP000076502    UP000075920    UP000078541    UP000005203    UP000053105    UP000075883    UP000075900    UP000075881    UP000075901    UP000242457    UP000078542    UP000075886    UP000192223    UP000075903    UP000075902    UP000076407    UP000075882    UP000007062    UP000075840    UP000078540    UP000009046    UP000075884    UP000076408    UP000075880    UP000007819    UP000030765    UP000000305    UP000008792    UP000268350    UP000007798    UP000001819    UP000008237    UP000007801    UP000000304    UP000000803    UP000078492    UP000007755    UP000000673    UP000192221    UP000092443    UP000092460    UP000037069    UP000009192    UP000002282    UP000001292   

PRIDE

D2Y4R7    Q2F5X8    H9JJQ9    Q9VV89    D2NUJ2   

Pfam

PF01217   Clat_adaptor_s

Interpro

IPR011012   Longin-like_dom_sf        + More
IPR022775   AP_mu_sigma_su       
IPR039652   Coatomer_zeta       
IPR000804   Clathrin_sm-chain_CS       
IPR006212   Furin_repeat       
IPR036084   Ser_inhib-like_sf       

SUPFAM

SSF64356   SSF64356        + More
SSF57567   SSF57567       

CDD

cd00064  FU

ProteinModelPortal

D2Y4R7   Q2F5X8   I4DNA1   I4DMZ6   A0A194PUC7   A0A1E1WMW9   + More
S4PB31   A0A212ENI6   H9JJQ9   A0A2A4JXX7   A0A2H1V7U4   A0A1E1WJ42   K7J3B5   A0A2H1VUV1   J9HTQ2   A0A023EGZ8   B0W863   A0A158NTZ6   A0A139WEJ8   A0A1L8DVP2   Q16K40   A0A3L8DN81   A0A0C9QIL8   A0A0L7RF57   U5EXW1   A0A1Y1MM58   A0A0J7KYC4   A0A067QZB9   A0A2P8XWI4   A0A0P4VTE4   A0A154P3D0   A0A182WBW8   A0A069DWL2   A0A195FL34   A0A088AC71   A0A0K8U5V1   E9IQ51   A0A0N0U2Y9   A0A182LSV6   A0A182RU48   A0A182K3P4   A0A182T9I0   A0A2A3EP29   V9IGN4   A0A195C7F4   A0A0A9WEI1   A0A182QL23   A0A1W4X0A8   A0A182VDE7   A0A182U1D6   A0A182WXB9   A0A182LKL5   Q7Q5C2   A0A182I4A8   A0A151I4P4   A0A0C9R460   E0VA85   A0A182NIW7   A0A182Y7W5   A0A182IRP8   A0A0T6AX76   A0A0K8R9L9   W8BUQ5   A0A158NTZ7   A0A0A1WQV6   A0A2R5LND1   A0A224YVH4   A0A131Z538   L7M6F0   A0A131XAT0   C4WUX3   A0A023GFJ6   A0A023FG69   A0A336MP29   A0A084WMK8   A0A0K8TSW5   T1JLE9   A0A023FTY2   E9H019   B4LG45   A0A3B0KLW4   B4N3N4   B5DRG2   E2C335   B3M4F3   B4QMW8   Q9VV89   D2NUJ2   A0A151IXJ4   F4WXA4   W5JB88   A0A1W4UUN2   A0A1A9YGX2   A0A1B0BY44   A0A0L0CCL3   A0A023GHX4   B4KXK2   A0A2M3Z7Q5   B4PKB4   B4HJR4  

PDB

5NZV     E-value=3.40052e-60,     Score=582

KEGG

692893    K20472 coatomer subunit zeta | (RefSeq) COPZ; nonclathrin coat protein zeta 1-COP

GO

GO:0006890   GO:0030126   GO:0006891   GO:0006886   GO:0016020   GO:0010883   GO:0006810   GO:0006355   GO:0043565   GO:0006741   GO:0005737   GO:0006396   GO:0000166   GO:0004887   GO:0003707   GO:0016021  

PANTHER

PTHR11043  

Length:

178

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.2108

Exp number, first 60 AAs:

0.00763

Total prob of N-in:

0.01142

outside

1  -  178

 

 

Pi

282.058471

Theta

22.754578

Tajima's D

0.723528

CLR

1.818015

CSRT

0.593870306484676

Interpretation

Uncertain