Silkworm Genome Informatics Database

Gene

KWMTBOMO00857

Pre Gene Modal

BGIBMGA009672

Annotation

PREDICTED:_homeotic_protein_distal-less_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr2(-):4588760-4601918 View in EpiBrowser

Transcription factor

Homeobox

Location in the cell

Nuclear Reliability : 3.649

CDS

ATGCTGCTCCGTAATATCAGCTTCGAAATGAGAATCCCTTTTTTTGAAGTGAAGATATGGTTCCAAAATCGTCGGAGCAAATACAAGAAGATGATGAAGGCAGCCCAAGTCGGAGCTCCCCCGCCCAGCCTGGGTCTCCCACCCGGAAGCCCACCAAGCAACAACCAGCTCTTACATGGTGGTGGAGGAAGTTCCAGTGGCTCCCAGCATTCACCTTCAGCGTACCAAAGCGGAGGACCGACACAGGCTCACTCGCCCACACCCAGTTCGACACCCGTGTCGGAACTATCCCCCGGACTGTCCCCCACTGGTACCCATTGGGACGTTAAGCAGCCCCCTCAAGCTTCTTGGGACGTAAAGGTCGGATATCCGACTGCGGGACGCTCCCCTGATGGGAGCTCGTGCGACGTCAAACCCCCTCACCAGCAATCATGGGACCCCCGAGTGGGATATGAGGGTTATTTCGCTCAAACGGAGGACATTGAGGGCTCCCCAAGCGTGGACGGAGCAAGACGACCGATGCCCTGGATGTTAAAGGGCGCGCCTCCTGGTCCTTGGGACATGAAGGGCGCGCATGCCCACGCTCTCCATCACCAGGGAGCCCCACAGCCTCACCCACCATACGTACCGCAGTATTCCTGGTATCAAACGGACGCGAACCCTGGACTTCTAACGGTATGGCCGGCAGTTTAG

Protein

MLLRNISFEMRIPFFEVKIWFQNRRSKYKKMMKAAQVGAPPPSLGLPPGSPPSNNQLLHGGGGSSSGSQHSPSAYQSGGPTQAHSPTPSSTPVSELSPGLSPTGTHWDVKQPPQASWDVKVGYPTAGRSPDGSSCDVKPPHQQSWDPRVGYEGYFAQTEDIEGSPSVDGARRPMPWMLKGAPPGPWDMKGAHAHALHHQGAPQPHPPYVPQYSWYQTDANPGLLTVWPAV

Uniprot

A0A2A4JZP8 Q8WRT8 A0A194PZI5 Q95VX3 J7FYS7 A0A194R0E3 + More
A0A1A9V9P3 A0A1A9ZWT1 A0A1I8MVV3 A0A1I8P6X7 A0A1I8P6U2 A0A1I8MVU4 A0A1A9YDK5 A0A1A9WBC0 A0A182SVG9

Pubmed

11797007 26354079 7953552 25315136

EMBL

NWSH01000344 PCG77246.1 AF404825 AAL69325.1 KQ459593 KPI96575.1 + More
AF404110 AAK97630.1 JX112033 AFP57439.1 KQ460890 KPJ10994.1

Proteomes

UP000218220 UP000053268 UP000053240 UP000078200 UP000092445 UP000095301 + More
UP000095300 UP000092443 UP000091820 UP000075901

Pfam

PF00046 Homeodomain

Interpro

IPR009057   Homeobox-like_sf        + More
IPR001356   Homeobox_dom
IPR017970   Homeobox_CS
IPR000047   HTH_motif
IPR020479   Homeobox_metazoa

SUPFAM

SSF46689 SSF46689

CDD

cd00086 homeodomain

ProteinModelPortal

A0A2A4JZP8 Q8WRT8 A0A194PZI5 Q95VX3 J7FYS7 A0A194R0E3 + More
A0A1A9V9P3 A0A1A9ZWT1 A0A1I8MVV3 A0A1I8P6X7 A0A1I8P6U2 A0A1I8MVU4 A0A1A9YDK5 A0A1A9WBC0 A0A182SVG9

KEGG

101736212 K18488 homeobox protein DLX2 | (RefSeq) homeotic protein distal-less

GO

GO:0003677 GO:0005634 GO:0043565 GO:0006355 GO:0006741 GO:0005737 GO:0006396 GO:0000166 GO:0004887 GO:0003707 GO:0016021

Subcellular location

Nucleus

Length:

230

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.000710000000000001

Exp number, first 60 AAs:

0.000710000000000001

Total prob of N-in:

0.02044

outside

1 - 230

Pi

242.953257

Theta

156.335709

Tajima's D

2.355327

CLR

0.244277

CSRT

0.928653567321634

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics