Gene

KWMTBOMO00854

Pre Gene Modal

BGIBMGA009758

Annotation

PREDICTED:_lipoma_HMGIC_fusion_partner-like_2_protein_[Bombyx_mori]

Location

Bomo_Chr2(+):4465032-4469840      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.913

CDS

ATGACACATGACCATAACAACTGTGGTTCATTCTCTTTCAACGGTCTCGCAACTGATTCTTCTGTTTACCCTGGCCCCTGGAAGGCTGCTATGTTTTTCTTGTCACTGTGTGCCTCAATACAATTTGCGACTGTGCTAGCAGGAATTATGGCGTGCTGTGTACAATCTGTTTTCAAGAAAAGCGTCATATCATTAGCAGGAGCCACACAGGCTTTGGCTGGTTTATTTGGTGTACTGGGCCTGGTGCTCTACCCCTGGGGTTGGGGTGCAGATCGGGTAAAAAGGCTGTGTGGTGAGAATTCTGAACCCTACATACCCGGAGATTGCTCTATAGGTTGGGCATTGTTCGTAACAGTTACGGGAGTCGCTCAAATATTCTTGGCCTGCGCTCTCTCGAAAACAGCGGACAAAGCGGCCAATTCTGATAAAGTTCAATTTCAAATGGACGAAGGGAAACAGTTGATATGCCTCGCTTGA

Protein

MTHDHNNCGSFSFNGLATDSSVYPGPWKAAMFFLSLCASIQFATVLAGIMACCVQSVFKKSVISLAGATQALAGLFGVLGLVLYPWGWGADRVKRLCGENSEPYIPGDCSIGWALFVTVTGVAQIFLACALSKTADKAANSDKVQFQMDEGKQLICLA

Uniprot

H9JJQ7   A0A2A4JKN4   A0A2H1VEH7   A0A194PV01   A0A194QZV9   A0A212FIJ1   + More
A0A2J7Q1P5   A0A067QPI9   A0A154P7D5   A0A0L7R6L5   A0A088AGR5   A0A026WJU9   A0A3L8DAW6   E1ZXS2   A0A151JRC4   A0A195CTT4   A0A195BMD2   A0A158P463   A0A195FPB3   E9INA7   A0A151WLQ6   A0A0A9YAI8   A0A1B6G9V4   A0A2A3ECQ6   D6WQ53   N6T566   A0A0J9RL38   B3MCC0   A0A1B0CPW1   A0A1W4UMG1   K7IQW8   A0A0J9RKV7   B4IHB3   A0A161MQY7   A0A131XNJ9   A0A1L8D9D7   A0A131YT60   A0A224XXH8   L7LTE9   Q95SW9   Q9W0X9   A0A023F9X2   A0A1I8Q232   A0A0P4VLX6   R4FPX5   B7PNM7   A0A0K8UQ15   W8B8I4   A0A1B0DGX9   A0A023GMP9   A0A034V993   B4LL20   B4MJX6   B4PBX9   A0A0M4EWC4   A0A0T6B4U1   A0A0C9S2Y3   B3NR82   T1JKX0   B4KQS2   A0A3B0JMG9   A0A2R5L8A0   Q292M2   B4GD31   A0A2S2QY71   A0A1A9X3T3   A0A1I8MQX9   A0A1B0BE68   A0A1A9XN76   A0A1A9UCQ8   A0A1B0G0P2   A0A087TDE8   A0A2S2P0X6   A0A210QIN9   A0A1A9ZNE1   A0A182M1E4   A0A182NAW0   Q7PMA1   A0A182PG51   A0A182T4P3   A0A182IXX1   A0A182KH10   C4WS49   A0A182UVQ6   A0A1S3HL43   A0A2H8TX49   I3KAN8   A0A182HRE1   A0A3B4AU55   A0A182TP65   A0A182KYZ2   R7TLB7   A0A3B4GQ65   A0A3P8PN17   A0A3P9BQY3   A0A182XHT5   B4J9M6   A0A182Y6E4   A0A182QB01   A0A084VWF4  

Pubmed

19121390    26354079    22118469    24845553    24508170    30249741    + More
20798317    21347285    21282665    25401762    18362917    19820115    23537049    22936249    17994087    20075255    28049606    26830274    25576852    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25474469    27129103    24495485    25348373    17550304    15632085    25315136    28812685    12364791    14747013    17210077    25186727    25463417    20966253    23254933    25244985    24438588   

EMBL

BABH01017571    NWSH01001256    PCG71962.1    ODYU01002123    SOQ39219.1    KQ459593    + More
KPI96574.1    KQ460890    KPJ10992.1    AGBW02008380    OWR53546.1    NEVH01019388    PNF22503.1    KK853162    KDR10434.1    KQ434822    KZC07108.1    KQ414646    KOC66488.1    KK107167    EZA56238.1    QOIP01000010    RLU17292.1    GL435087    EFN74044.1    KQ978615    KYN29834.1    KQ977279    KYN04101.1    KQ976435    KYM87048.1    ADTU01008667    KQ981382    KYN42298.1    GL764292    EFZ17936.1    KQ982959    KYQ48750.1    GBHO01014395    JAG29209.1    GECZ01013817    GECZ01010550    JAS55952.1    JAS59219.1    KZ288283    PBC29508.1    KQ971354    EFA06128.2    APGK01052258    KB741211    KB632263    ENN72808.1    ERL90942.1    CM002911    KMY96487.1    CH902619    EDV37244.1    AJWK01022700    KMY96486.1    CH480838    EDW49289.1    GEMB01002020    JAS01159.1    GEFH01000786    JAP67795.1    GFDF01011134    JAV02950.1    GEDV01006154    JAP82403.1    GFTR01003715    JAW12711.1    GACK01010147    JAA54887.1    AY060453    AAL25492.1    AE013599    BT150127    AAF47300.1    AGO35566.1    GBBI01000913    JAC17799.1    GDKW01001100    JAI55495.1    ACPB03015779    GAHY01000674    JAA76836.1    ABJB010077035    ABJB010208242    ABJB010305548    ABJB010437931    ABJB010710204    ABJB010745052    ABJB010779026    ABJB010863000    ABJB010929434    ABJB011106785    DS753757    EEC08199.1    GDHF01026806    GDHF01024533    GDHF01023864    GDHF01011864    GDHF01011522    JAI25508.1    JAI27781.1    JAI28450.1    JAI40450.1    JAI40792.1    GAMC01013137    JAB93418.1    AJVK01033898    AJVK01033899    GBBM01000296    JAC35122.1    GAKP01020629    GAKP01020627    JAC38325.1    CH940648    EDW61827.1    CH963846    EDW72415.1    CM000158    EDW92633.1    CP012524    ALC42362.1    LJIG01009884    KRT82187.1    GBYB01015256    JAG85023.1    CH954179    EDV57101.1    JH431714    CH933808    EDW09271.1    OUUW01000001    SPP74486.1    GGLE01001586    MBY05712.1    CM000071    EAL24840.1    CH479181    EDW31569.1    GGMS01013524    MBY82727.1    JXJN01012802    CCAG010023103    KK114715    KFM63137.1    GGMR01010259    MBY22878.1    NEDP02003473    OWF48602.1    AXCM01005445    AAAB01008980    EAA14087.5    ABLF02038861    ABLF02038864    ABLF02057135    AK340046    BAH70719.1    GFXV01007011    MBW18816.1    AERX01025396    APCN01001695    AMQN01002506    KB309374    ELT94643.1    CH916367    EDW02533.1    AXCN02000654    ATLV01017583    KE525174    KFB42298.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000235965    + More
UP000027135    UP000076502    UP000053825    UP000005203    UP000053097    UP000279307    UP000000311    UP000078492    UP000078542    UP000078540    UP000005205    UP000078541    UP000075809    UP000242457    UP000007266    UP000019118    UP000030742    UP000007801    UP000092461    UP000192221    UP000002358    UP000001292    UP000000803    UP000095300    UP000015103    UP000001555    UP000092462    UP000008792    UP000007798    UP000002282    UP000092553    UP000008711    UP000009192    UP000268350    UP000001819    UP000008744    UP000091820    UP000095301    UP000092460    UP000092443    UP000078200    UP000092444    UP000054359    UP000242188    UP000092445    UP000075883    UP000075884    UP000007062    UP000075885    UP000075901    UP000075880    UP000075881    UP000007819    UP000075903    UP000085678    UP000005207    UP000075840    UP000261520    UP000075902    UP000075882    UP000014760    UP000261460    UP000265100    UP000265160    UP000076407    UP000001070    UP000076408    UP000075886    UP000030765   

PRIDE

H9JJQ7    Q95SW9    Q9W0X9   

Pfam

PF10242   L_HMGIC_fpl

Interpro

IPR019372   LHFPL       

ProteinModelPortal

H9JJQ7   A0A2A4JKN4   A0A2H1VEH7   A0A194PV01   A0A194QZV9   A0A212FIJ1   + More
A0A2J7Q1P5   A0A067QPI9   A0A154P7D5   A0A0L7R6L5   A0A088AGR5   A0A026WJU9   A0A3L8DAW6   E1ZXS2   A0A151JRC4   A0A195CTT4   A0A195BMD2   A0A158P463   A0A195FPB3   E9INA7   A0A151WLQ6   A0A0A9YAI8   A0A1B6G9V4   A0A2A3ECQ6   D6WQ53   N6T566   A0A0J9RL38   B3MCC0   A0A1B0CPW1   A0A1W4UMG1   K7IQW8   A0A0J9RKV7   B4IHB3   A0A161MQY7   A0A131XNJ9   A0A1L8D9D7   A0A131YT60   A0A224XXH8   L7LTE9   Q95SW9   Q9W0X9   A0A023F9X2   A0A1I8Q232   A0A0P4VLX6   R4FPX5   B7PNM7   A0A0K8UQ15   W8B8I4   A0A1B0DGX9   A0A023GMP9   A0A034V993   B4LL20   B4MJX6   B4PBX9   A0A0M4EWC4   A0A0T6B4U1   A0A0C9S2Y3   B3NR82   T1JKX0   B4KQS2   A0A3B0JMG9   A0A2R5L8A0   Q292M2   B4GD31   A0A2S2QY71   A0A1A9X3T3   A0A1I8MQX9   A0A1B0BE68   A0A1A9XN76   A0A1A9UCQ8   A0A1B0G0P2   A0A087TDE8   A0A2S2P0X6   A0A210QIN9   A0A1A9ZNE1   A0A182M1E4   A0A182NAW0   Q7PMA1   A0A182PG51   A0A182T4P3   A0A182IXX1   A0A182KH10   C4WS49   A0A182UVQ6   A0A1S3HL43   A0A2H8TX49   I3KAN8   A0A182HRE1   A0A3B4AU55   A0A182TP65   A0A182KYZ2   R7TLB7   A0A3B4GQ65   A0A3P8PN17   A0A3P9BQY3   A0A182XHT5   B4J9M6   A0A182Y6E4   A0A182QB01   A0A084VWF4  

PDB

6C14     E-value=2.33041e-06,     Score=117

KEGG

101746683    no KO assigned | (RefSeq) lipoma HMGIC fusion partner-like 2 protein

GO

GO:0016021   GO:0005918   GO:0007163  

PANTHER

PTHR12489  

Length:

158

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

66.76336

Exp number, first 60 AAs:

22.40449

Total prob of N-in:

0.01096

POSSIBLE N-term signal

sequence

outside

1  -  31

TMhelix

32  -  54

inside

55  -  60

TMhelix

61  -  83

outside

84  -  109

TMhelix

110  -  132

inside

133  -  158

 

 

Pi

234.86693

Theta

179.149516

Tajima's D

0.833703

CLR

0.000014

CSRT

0.614869256537173

Interpretation

Uncertain