Gene

KWMTBOMO00846

Pre Gene Modal

BGIBMGA009757

Annotation

PREDICTED:_mucin-2-like_[Amyelois_transitella]

Location

Bomo_Chr2(+):4290962-4291797      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.463

CDS

ATGAAACACATTCCTAAAGAAAAAAGACAGAAATGGGACAAAAAGTCTGAACAATGCATACTTATAGGCTATCCTGAAGATGTTAAGGGATACCGTATATACAATCCTGCAACACAGAGCATCACAACAAGTCGAGATGTTATATTTATAGAAGAAAATAACTTAGATGAACAGAAAATCATTGAAATAAAAGAAGATGATTTAAGTAATAAATCATTGTCACCTTCAGTGGGAGATTTACCGGACACCAGTAGGGAGGATTCATTTACTTCAGCTGAAAATGCTACTGACTTGGATGAAACCTACGTACCATCTTCTGAGGATGAGGAGTCCTTGAAATTAGAAAAAGACCTGCTGAGAACATTACCGAAAAGGCACAGAAAGCAACCTGACAGATATGGATATATGTGTACAGAAGAATGTAACAATCCAGTCAGAGATGAATTGACATTAGAAGAGGCACTGGAAGGACCAGAAAAGGAGCACTGGGAACAGGCTATCAAAGAAGAACTGAAAAGTTTTGAAGACAACAAGGCATGGGATATTGTTGACGTTCCTGTAAGTGGCAACATTGTAAAGTGCAAGTGGGTTCTTAAAAAGAAATACGATGCTGAAAATAATGTGCGATATCGAGCGAGACTTGTGGCTAAAGGTTGTTCACAAAGATATGGTGAGGACTACAGTGAAACTTTCTCTCCTGTGGTGCGGCGGTTATGGGCCCAGCACGCTTCCAATGCCATTTCTTGA

Protein

MKHIPKEKRQKWDKKSEQCILIGYPEDVKGYRIYNPATQSITTSRDVIFIEENNLDEQKIIEIKEDDLSNKSLSPSVGDLPDTSREDSFTSAENATDLDETYVPSSEDEESLKLEKDLLRTLPKRHRKQPDRYGYMCTEECNNPVRDELTLEEALEGPEKEHWEQAIKEELKSFEDNKAWDIVDVPVSGNIVKCKWVLKKKYDAENNVRYRARLVAKGCSQRYGEDYSETFSPVVRRLWAQHASNAIS

Uniprot

V5GAG2   A0A2A4J6E2   A0A1Y1NAZ7   A0A1Y1N668   A0A194RJV9   A0A0A9WQD4   + More
X1X3E5   X1X2J4   A0A1Y1KL90   A0A0J7NHJ8   T1PKV2   A0A0C9RAA9   A0A2A4JRI1   A0A034VP70   A0A1X7U495   A0A0J7K6A2   A0A0J7K416   A0A0J7K761   A0A2N9GBJ1   A0A2N9GMY7   A0A0N1ICY1   A0A2N9GEP0   A0A2N9I2Y6   A0A2N9HJF5   A0A2N9FSJ8   A0A0A9XUP7   A0A2N9H7K3   A0A2N9FL83   A0A2N9I6R9   A0A2N9FRN5   A0A355BBC5   A0A2N9FVE8   A0A2N9GKI3   A0A2N9H4V1   A0A2N9EIR8   A0A2N9EMG6   A0A2N9I8F7   A0A2N9HZR4   Q9ZRJ0   A0A2N9GCG9   A0A2N9FV67   A0A2N9G4M2   A0A2N9GX47   A0A2N9IT68   A0A2N9EXI3   A0A2N9EIR6   A0A2N9EPJ3   A0A2N9EK90   A0A2N9FHB7   A0A2N9IWT1   A0A2N9ELY1   A0A2N9EM80   A0A2N9GA80   A0A2N9HJ76   A0A2N9GHK3   A0A2N9HZ75   A0A2N9G1G5   A0A2N9GEX0   A0A2N9EHW3   A0A2N9EYI8   A0A2N9EGT6   A0A2N9GYW9   A0A2N9GRB2   A0A2N9FW82   A0A2N9ETC8   A0A2N9GGS7   A0A2N9GMG5   A0A182H8F8   A0A2N9FQJ1   A0A2N9JB46   A0A2N9E6G7   A0A2N9I7K4   A0A2N9HKJ4   A0A2N9FWL6   A0A2N9H6B2   A0A0A9XV68   A0A2N9G940   A0A2N9GQ16   A0A0J7KG03   A0A396GW39   A0A0A9XY84   A0A085MW59   A0A2N9GSE2   A0A2N9I9F7   A0A2N9I1P0   A0A2N9GRZ0   A0A2N9IGQ9   A0A2N9I0Q5   A0A0J7KH47   A0A146LH62   A0A1X7U0V8   A0A2N9J6C2   A0A0A9YB53   A0A0A9W6P7   A0A2N9IGN3   A0A2N9EW59   A0A2N9IN51  

Pubmed

28004739    26354079    25401762    25348373    30148503    8624443    + More
26483478    30397259    24929829    26823975   

EMBL

GALX01001351    JAB67115.1    NWSH01002797    PCG67521.1    GEZM01011855    JAV93396.1    + More
GEZM01011856    JAV93393.1    KQ460297    KPJ16236.1    GBHO01036544    JAG07060.1    ABLF02062902    ABLF02031072    ABLF02059092    ABLF02060653    GEZM01082909    JAV61231.1    LBMM01004924    KMQ91985.1    KA648745    AFP63374.1    GBYB01005195    JAG74962.1    NWSH01000816    PCG74073.1    GAKP01015352    JAC43600.1    LBMM01013184    KMQ85774.1    LBMM01014433    KMQ85183.1    LBMM01012652    KMQ86074.1    OIVN01001715    SPC96923.1    OIVN01002137    SPD00935.1    KQ460882    KPJ11482.1    OIVN01001812    SPC97920.1    OIVN01004614    SPD18379.1    OIVN01003558    SPD12118.1    OIVN01001130    SPC90232.1    GBHO01019985    JAG23619.1    OIVN01002940    SPD07631.1    OIVN01000958    SPC87933.1    OIVN01004921    SPD19975.1    OIVN01001091    SPC89740.1    DNYX01000169    HBK83011.1    OIVN01001202    SPC91100.1    OIVN01002040    SPD00055.1    OIVN01002854    SPD06945.1    OIVN01000351    SPC78817.1    OIVN01000191    SPC75975.1    OIVN01005068    SPD20708.1    OIVN01004420    SPD17230.1    D83003    BAA11674.1    OIVN01001733    SPC97079.1    OIVN01001196    SPC91020.1    OIVN01001484    SPC94512.1    OIVN01002491    SPD04083.1    OIVN01006189    SPD27343.1    OIVN01000395    SPC79545.1    OIVN01000116    SPC74628.1    OIVN01000469    SPC80756.1    OIVN01000147    SPC75222.1    OIVN01000866    SPC86622.1    OIVN01006238    SPD28613.1    OIVN01000183    SPC75833.1    OIVN01000189    SPC75922.1    OIVN01001666    SPC96375.1    OIVN01003897    SPD14257.1    OIVN01002247    SPD01987.1    OIVN01004379    SPD17029.1    OIVN01001388    SPC93388.1    OIVN01001789    SPC97674.1    OIVN01000095    SPC74169.1    OIVN01000404    SPC79669.1    OIVN01000080    SPC73890.1    OIVN01002564    SPD04723.1    OIVN01002268    SPD02135.1    OIVN01001520    SPC94877.1    OIVN01000557    SPC82046.1    OIVN01001890    SPC98658.1    OIVN01002444    SPD03657.1    JXUM01118474    KQ566190    KXJ70335.1    OIVN01001052    SPC89229.1    OIVN01006468    SPD33689.1    OIVN01000113    SPC74546.1    OIVN01005334    SPD21977.1    OIVN01003569    SPD12194.1    OIVN01001534    SPC95017.1    OIVN01002904    SPD07378.1    GBHO01019780    JAG23824.1    OIVN01001636    SPC96102.1    OIVN01002547    SPD04547.1    LBMM01008124    KMQ89126.1    PSQE01000007    RHN45312.1    GBHO01019781    JAG23823.1    KL367622    KFD61455.1    OIVN01002274    SPD02204.1    OIVN01005059    SPD20680.1    OIVN01004603    SPD18338.1    OIVN01002256    SPD02034.1    OIVN01005646    SPD23424.1    OIVN01004867    SPD19656.1    LBMM01007399    KMQ89763.1    GDHC01011760    JAQ06869.1    OIVN01006429    SPD32977.1    GBHO01016859    JAG26745.1    GBHO01043059    JAG00545.1    OIVN01005591    SPD23209.1    OIVN01000367    SPC79092.1    OIVN01006120    SPD25513.1   

Proteomes

UP000218220    UP000053240    UP000007819    UP000036403    UP000007879    UP000069940    + More
UP000249989    UP000265566   

Pfam

PF00098   zf-CCHC        + More
PF00665   rve
PF07727   RVT_2
PF13976   gag_pre-integrs
PF13961   DUF4219
PF00931   NB-ARC
PF18052   Rx_N
PF13855   LRR_8
PF03106   WRKY

Interpro

IPR001584   Integrase_cat-core        + More
IPR039537   Retrotran_Ty1/copia-like       
IPR036875   Znf_CCHC_sf       
IPR012337   RNaseH-like_sf       
IPR001878   Znf_CCHC       
IPR013103   RVT_2       
IPR025724   GAG-pre-integrase_dom       
IPR036397   RNaseH_sf       
IPR025314   DUF4219       
IPR002182   NB-ARC       
IPR032675   LRR_dom_sf       
IPR038005   RX-like_CC       
IPR041118   Rx_N       
IPR036576   WRKY_dom_sf       
IPR001611   Leu-rich_rpt       
IPR003657   WRKY_dom       
IPR027417   P-loop_NTPase       

SUPFAM

SSF57756   SSF57756        + More
SSF53098   SSF53098       
SSF118290   SSF118290       
SSF52540   SSF52540       

Gene 3D

3.30.420.10     3.80.10.10     2.20.25.80    

CDD

cd14798  RX-CC_like

ProteinModelPortal

V5GAG2   A0A2A4J6E2   A0A1Y1NAZ7   A0A1Y1N668   A0A194RJV9   A0A0A9WQD4   + More
X1X3E5   X1X2J4   A0A1Y1KL90   A0A0J7NHJ8   T1PKV2   A0A0C9RAA9   A0A2A4JRI1   A0A034VP70   A0A1X7U495   A0A0J7K6A2   A0A0J7K416   A0A0J7K761   A0A2N9GBJ1   A0A2N9GMY7   A0A0N1ICY1   A0A2N9GEP0   A0A2N9I2Y6   A0A2N9HJF5   A0A2N9FSJ8   A0A0A9XUP7   A0A2N9H7K3   A0A2N9FL83   A0A2N9I6R9   A0A2N9FRN5   A0A355BBC5   A0A2N9FVE8   A0A2N9GKI3   A0A2N9H4V1   A0A2N9EIR8   A0A2N9EMG6   A0A2N9I8F7   A0A2N9HZR4   Q9ZRJ0   A0A2N9GCG9   A0A2N9FV67   A0A2N9G4M2   A0A2N9GX47   A0A2N9IT68   A0A2N9EXI3   A0A2N9EIR6   A0A2N9EPJ3   A0A2N9EK90   A0A2N9FHB7   A0A2N9IWT1   A0A2N9ELY1   A0A2N9EM80   A0A2N9GA80   A0A2N9HJ76   A0A2N9GHK3   A0A2N9HZ75   A0A2N9G1G5   A0A2N9GEX0   A0A2N9EHW3   A0A2N9EYI8   A0A2N9EGT6   A0A2N9GYW9   A0A2N9GRB2   A0A2N9FW82   A0A2N9ETC8   A0A2N9GGS7   A0A2N9GMG5   A0A182H8F8   A0A2N9FQJ1   A0A2N9JB46   A0A2N9E6G7   A0A2N9I7K4   A0A2N9HKJ4   A0A2N9FWL6   A0A2N9H6B2   A0A0A9XV68   A0A2N9G940   A0A2N9GQ16   A0A0J7KG03   A0A396GW39   A0A0A9XY84   A0A085MW59   A0A2N9GSE2   A0A2N9I9F7   A0A2N9I1P0   A0A2N9GRZ0   A0A2N9IGQ9   A0A2N9I0Q5   A0A0J7KH47   A0A146LH62   A0A1X7U0V8   A0A2N9J6C2   A0A0A9YB53   A0A0A9W6P7   A0A2N9IGN3   A0A2N9EW59   A0A2N9IN51  

KEGG

NA   

GO

GO:0000943   GO:0015074   GO:0008270   GO:0003676   GO:0003964   GO:0016301   GO:0043531   GO:0003700   GO:0043565  

PANTHER

PTHR11439  

Subcellular location

Nucleus  

Length:

248

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.21258

outside

1  -  248

 

 

Pi

124.19267

Theta

64.057612

Tajima's D

1.508963

CLR

0

CSRT

0.793160341982901

Interpretation

Uncertain