SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00844
Pre Gene Modal
BGIBMGA009681
Annotation
PREDICTED:_uncharacterized_protein_LOC106129482_[Amyelois_transitella]
Location in the cell
Extracellular   Reliability : 2.318
 

Sequence

CDS
ATGAGGTGTTTATTGATAATAAGCGCGCTGCTCGCGACCGCGCGTTCCAAGCAAATCCCGCTAACAGATTTACCGGGAACGACGGTAGCTGCGGTATCCGAGTCAGATACCACGTCGTGGCCCGGCGCCGTCGCTGCCCTGGACTCTCTCACCGTCGCCTGCGAGAAAGACAGCATGCAAGTCACCATTACACTGGCGAAACGGGACCCCGAAATCAATAGCATCTACGACATATTCAATGGGATCGTCTACCCTGCTGGACTTGGGAGCAATTCGAGCTGTCTCCGAGAATACGTGGCAGAGCGGGGAGACCTACAGTACACCGTGCCTTTGAAGGGCTGCAATACCATGTCCACTGATAACGACGACGGCACAGTTGAGTACTACAACAACATCATAGTTCAGCCGCACTTGAAGCTGGTGACCGGCCAGGGTCGAGGCTACCACGTGAGGTGCAGGTACCGGCGCCGCGACCTCACACATTTCCACGTGTACCGACCGAGGGCCCACGCCGACAGACTCACCAATTCACTATCCGATGATTTTAATGACAACGAGGAGTTTGACGAGGATTCAGGATTGTTGCCGTCTGCCACGATGAAGATATATAAGGGTGACCCTAAAAATAAAGAGGAGGCATCAAACGTGAAGATCGGCGACACATTGACCCTGGTCGTGGCGCTGGAGAAACAGCGGCGGTTCGGTTTGCTGGTCTCCGAGTGTTCTGTTAAGGATGGACTGGGCTGGTCGGAGCAGACCCTCATCGCTGATAATGGATGTCCATTAGACGCTGAGATAATGGGCATGTTCCAATACTCGAGCGACAAGCAAGAGGCGCATGTGGCGTACCCCGCGCATAAGTTCCCGTACACAGCCAGCGTGTACTACACGTGTGCCGTCAAGTTGTGCGACCTGCAGCACCCGACGGACTGCGAACCTTGCAAGATAAAGGAAAGGAGCCGCCGCGACACAGACGACGAAGGCTCCCCAGCGACAGTGGAACTCTTCTCCGGCTTATATGTCAACGAGCCAGATTCGCTTGACAACGACGACGTTATCAGCGAAAAGAAAGAGGACGAGATATGTATTTCGCAACGTAATTTCGCCATCGGCATATGCATAGCCGGCGTTATTCTGATGGTGTGCGTCATAGCGGCTATCGCCTTCATACTGGCTCGACGAAGGAATCCGAAGGCGTACTCGCGGACTGGCAGCTCCCTGTACAGCGGCCCTTACACTAACACCGGCTATTCACACACAAGCTAA
Protein
MRCLLIISALLATARSKQIPLTDLPGTTVAAVSESDTTSWPGAVAALDSLTVACEKDSMQVTITLAKRDPEINSIYDIFNGIVYPAGLGSNSSCLREYVAERGDLQYTVPLKGCNTMSTDNDDGTVEYYNNIIVQPHLKLVTGQGRGYHVRCRYRRRDLTHFHVYRPRAHADRLTNSLSDDFNDNEEFDEDSGLLPSATMKIYKGDPKNKEEASNVKIGDTLTLVVALEKQRRFGLLVSECSVKDGLGWSEQTLIADNGCPLDAEIMGMFQYSSDKQEAHVAYPAHKFPYTASVYYTCAVKLCDLQHPTDCEPCKIKERSRRDTDDEGSPATVELFSGLYVNEPDSLDNDDVISEKKEDEICISQRNFAIGICIAGVILMVCVIAAIAFILARRRNPKAYSRTGSSLYSGPYTNTGYSHTS

Summary

EMBL
NWSH01000684    PCG74805.1    KQ460890    KPJ10984.1    KQ459593    KPI96563.1    + More
BABH01017559    ODYU01003055    SOQ41351.1    ODYU01006129    SOQ47710.1    KQ971351    EFA06573.1    GEZM01032293    JAV84685.1    GEZM01032294    JAV84684.1    NEVH01019380    PNF22525.1    KK853496    KDR07206.1    QOIP01000009    RLU18924.1    KQ435711    KOX79527.1    KQ434796    KZC05806.1    GBYB01014698    JAG84465.1    GBYB01014695    JAG84462.1    KQ764883    OAD54311.1    KQ980903    KYN11655.1    ATLV01024074    KE525348    KFB50493.1    GDAI01002926    JAI14677.1    GECU01035315    JAS72391.1    GEBQ01030936    JAT09041.1    GEBQ01001532    JAT38445.1    DS235196    EEB13139.1    AAAB01008807    EAA03968.4    APCN01001489    GDUN01000204    JAN95715.1    GEDC01026926    JAS10372.1    AJVK01033134    AJVK01033135    GFDF01010940    JAV03144.1    JXUM01002660    JXUM01002661    JXUM01002662    JXUM01002663    JXUM01002664    JXUM01002665    JXUM01002666    JXUM01002667    GAPW01001653    KQ560143    JAC11945.1    KXJ84198.1    KZ288340    PBC27759.1    GFDL01002062    JAV32983.1    KQ982130    KYQ59756.1    GEDC01007972    JAS29326.1    CH933808    EDW09185.2    KRG04511.1    GDIP01038354    JAM65361.1    KRG04510.1    LRGB01002648    KZS06663.1    GDIP01224577    JAI98824.1    GGFM01006100    MBW26851.1    GGFM01001141    MBW21892.1    GDIQ01014248    JAN80489.1    GDIP01039550    JAM64165.1    GL444953    EFN60409.1    LBMM01005354    KMQ91582.1    GDIP01250811    JAI72590.1    GGFK01001553    MBW34874.1    GGFL01014386    MBW78564.1    GGFL01014387    MBW78565.1    CVRI01000059    CRL03070.1    ABLF02033007    GGMR01007184    MBY19803.1    CP012524    ALC40748.1    GAPW01001774    JAC11824.1    GFXV01006816    MBW18621.1    GGMS01002823    MBY72026.1    GGFJ01005343    MBW54484.1    CM000158    EDW92566.1    KRK00580.1    KRK00581.1    CH940648    EDW61553.1    KRF80059.1    AE013599    BT003795    BT011382    AY862157    AAM68320.2    AAO41478.1    AAR96174.1    AAW51949.1    ACZ94567.1    AHN56644.1    KQ977185    KYN05042.1    CH954179    EDV57032.1    KQS63135.1    KQ976432    KYM87462.1    CM002911    KMY96379.1    KMY96380.1    KMY96381.1    GDIP01079054    JAM24661.1    CH902619    EDV37791.1    KPU77035.1    GDIP01200583    JAJ22819.1    GL732599    EFX72491.1    CM000071    EDY69486.1    KRT03092.1    KRT03093.1    CH479210    EDW32899.1    APGK01019949    APGK01019950    APGK01019951    APGK01019952    KB740150    ENN81248.1    GANO01004137    JAB55734.1    GDIP01116396    JAL87318.1    NNAY01000899    OXU26019.1    CH963848    EDW73841.2    GFTR01005735    JAW10691.1    KQ981905    KYN33390.1    CH480838    EDW49220.1    KK115487    KFM65219.1    GBBK01001723    JAC22759.1    KB632173    ERL89573.1    GBBM01006432    JAC28986.1    GFPF01010635    MAA21781.1    GEDV01011065    JAP77492.1    ACPB03000430    ACPB03000431    GAHY01001786    JAA75724.1    GEGO01002170    JAR93234.1    GFAC01004337    JAT94851.1    GBHO01043733    GBRD01000595    GDHC01002599    JAF99870.1    JAG65226.1    JAQ16030.1    AXCM01002461    PYGN01002240    PSN31033.1   
Pfam
PF00100   Zona_pellucida
Interpro
IPR001507   ZP_dom       

Ontologies

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.996508
 
 
Length:
421
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.94376
Exp number, first 60 AAs:
0.00021
Total prob of N-in:
0.01116
outside
1  -  369
TMhelix
370  -  392
inside
393  -  421
 
 

Population Genetic Test Statistics

Pi
23.353553
Theta
152.04326
Tajima's D
1.500285
CLR
0.044833
CSRT
0.789810509474526
Interpretation
Uncertain
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