SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00841
Pre Gene Modal
BGIBMGA009754
Annotation
PREDICTED:_uncharacterized_protein_LOC101735440_isoform_X2_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 3.639
 

Sequence

CDS
ATGGCGTATTTTAGGTTATATTTGTTTTTGTTTTGTTTGAAGTTAGTCGAGTCAAAAATTTTGTGCGAATTAGGATTTTGTGAAAAACACATCCGAGAGCACGGTTGCCCTGAGCCCCCTATACACTGTGCTGTGAACAACGCCACTCACAGCGGTCTCTGGTTACCATCGCCGACGCTCTGCAACTGTTGCCCTTATTGCCTAACGTTTATTGAAGAGGGAGACCATTGCAGTGCCGGTGGACCTGGTACCGGTGCTAATGTGGGCCGCTGCGGCGATGGCCTCACCTGCGTTCGAGATGACACCGATGGGCACAGCTATTGCCGGAGAATGACGTCAGATTGTCACACGGCTCAAGACAATTTTGATGCTCGTTTGAGGTCCGGTCAAGTAGGAGCGTTAGAGCACAGACCACACTGCGATGGCAAAGGAAAGTTTGCATCGTTTTATTGTATACCAGCGCACACGTGTTTTTGTCAATCAGAAGAAGGTGAGAGGATTTTCGGCGAAGTCCTGAATCTAGGTTCATCAACAGAACGGAATATGCACTGTGGATGCTCCCGTTTAAGTTGGAAGATCAAGAAATCCATTCAGACAGGGGTTAGGCTGCCGGTCCTGACTCCTAGGTGCACGGCTGACGGTAACTTCCATCCGATCCAGTGTATCGGCAATATTTGCTATTGTGTCGATACCGTAACGGGCATCATTGAGGAAGGAGATGGAAAAGAAATTGACCTCGACGAGGAGCCGGTCACAGAGTTGGAATGCTACAATCCTCGTCTGGATTTCTTCCCCGAATTCAGTAGAGGCGAACCGCCCTACCAGTATACGACGCCTTGTCTCAAAGACGTTACGGAGAAGATAGACATGTTCTTGCAGAGCATAGAAGATGGGTTCATTGTGGATTACTTCAACAGCTTCCCAGAGTGCAAGCCTGACGGAACCTACGGTACTGTCCTCGAGAACAGTGATGGAATGAAAATATGTGCCGATCAAAGAGGCGTTCAGATAAAAGATTATGAAGCAAAACCAGATACGCCAGAATATGAAGCCATGAATTGTAATTGTGCACAAACATCACTCGTAATGGCAGATGCTCTTGAAAAACCAGTCTGTTGTAAGAACGGTAATTTCCGTCGCATACAATGCCGGCGAGGGATGTGCCGTTGTGTTGATACCGATGGTAGACAAGTAGGAACGGATTCGAGTGATGTGACTAGACTTCCCTGCTTCACGGCAAACTGGCGAGATTGTTAG
Protein
MAYFRLYLFLFCLKLVESKILCELGFCEKHIREHGCPEPPIHCAVNNATHSGLWLPSPTLCNCCPYCLTFIEEGDHCSAGGPGTGANVGRCGDGLTCVRDDTDGHSYCRRMTSDCHTAQDNFDARLRSGQVGALEHRPHCDGKGKFASFYCIPAHTCFCQSEEGERIFGEVLNLGSSTERNMHCGCSRLSWKIKKSIQTGVRLPVLTPRCTADGNFHPIQCIGNICYCVDTVTGIIEEGDGKEIDLDEEPVTELECYNPRLDFFPEFSRGEPPYQYTTPCLKDVTEKIDMFLQSIEDGFIVDYFNSFPECKPDGTYGTVLENSDGMKICADQRGVQIKDYEAKPDTPEYEAMNCNCAQTSLVMADALEKPVCCKNGNFRRIQCRRGMCRCVDTDGRQVGTDSSDVTRLPCFTANWRDC

Summary

EMBL
BABH01017551    BABH01017552    NWSH01001124    PCG72479.1    KQ460890    KPJ10981.1    + More
GDQN01000765    JAT90289.1    GDQN01003167    JAT87887.1    KQ459593    KPI96560.1    ODYU01011452    SOQ57194.1    AGBW02014667    OWR41250.1    ODYU01004732    SOQ44919.1    GALX01002575    JAB65891.1    APCN01001489    AAAB01008807    EAA04008.3    AXCN02000497    ATLV01024072    KE525348    KFB50488.1    AXCM01009055    AJVK01059044    CH477618    EAT38224.1    ADMH02002049    ETN59763.1    GGFK01001018    MBW34339.1    GGFK01001029    MBW34350.1    UFQS01001614    UFQT01001614    SSX11600.1    SSX31167.1    GGFL01002344    MBW66522.1    FJ654713    ACP18834.1    DS231889    EDS43694.1    APGK01059446    KB741293    KB632046    ENN70282.1    ERL88289.1    GFDL01007271    JAV27774.1    CVRI01000051    CRK99618.1    KQ971354    EFA06927.2    NNAY01002067    OXU22177.1    JXUM01002648    KQ560143    KXJ84196.1    AAZX01001184    AJWK01032005    GDIP01017321    JAM86394.1    GDIP01233250    JAI90151.1    GDIP01229500    JAI93901.1    GDIQ01154872    JAK96853.1    GDIP01062761    GDIQ01038977    JAM40954.1    JAN55760.1    GDIP01144207    GDIQ01254798    LRGB01000050    JAJ79195.1    JAJ96926.1    KZS21200.1    GDIQ01193511    JAK58214.1    GDIQ01058166    JAN36571.1    GDIQ01058167    JAN36570.1    GDIQ01097206    JAL54520.1    GL732624    EFX70144.1    GDIQ01107291    JAL44435.1    GDIP01118707    JAL85007.1    GDIQ01213035    JAK38690.1    PYGN01001103    PSN37550.1    GDIQ01182919    JAK68806.1    GDIQ01055518    JAN39219.1    GDIQ01055519    JAN39218.1    GDIQ01007371    JAN87366.1    NEVH01024955    PNF16259.1    GDIP01182893    JAJ40509.1    GDIQ01173178    JAK78547.1    GDIQ01038978    JAN55759.1    LNIX01000004    OXA56364.1    GDIQ01081856    JAN12881.1    GDIQ01154871    JAK96854.1    GDIP01118708    GDIP01044665    JAL85006.1    GDIQ01048181    JAN46556.1    GDIP01035260    JAM68455.1    LJIJ01000155    ODN01386.1    KK117915    KFM71752.1    CH477237    EAT46562.1    HACA01029261    CDW46622.1    AAAB01008960    EDO63763.1    APCN01000100    CAEY01001959    GFWV01021685    MAA46413.1   
Pfam
PF00086   Thyroglobulin_1        + More
PF00939   Na_sulph_symp
Interpro
IPR036857   Thyroglobulin_1_sf        + More
IPR000716   Thyroglobulin_1       
IPR009030   Growth_fac_rcpt_cys_sf       
IPR000867   IGFBP-like       
IPR031312   Na/sul_symport_CS       
IPR001898   SLC13A/DASS       
SUPFAM
SSF57610   SSF57610        + More
SSF57184   SSF57184       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.995252
 
 
Length:
418
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00462
Exp number, first 60 AAs:
0.00462
Total prob of N-in:
0.00142
outside
1  -  418
 
 

Population Genetic Test Statistics

Pi
286.349469
Theta
174.095894
Tajima's D
2.082422
CLR
0.005054
CSRT
0.889305534723264
Interpretation
Uncertain
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