SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00840
Annotation
PREDICTED:_metaxin-2_isoform_X2_[Papilio_machaon]
Location in the cell
Extracellular   Reliability : 1.262 Nuclear   Reliability : 1.153
 

Sequence

CDS
ATGCCGGAATTCAACTTATCTGATTCTATAATAACCTCTTTGAATGCCCAAGAGCCATGGCCGGATAATGTGAAACTTTATCAGCCTTATGAAGTTGAGCAGATATTGTTACCTGACAATGCGAGCTGTCTGGCAGTACAAGCATTTCTGAAGATGTGTAATCTTCCATTCGAAGTGGAGATGCGCTGGAATGCTGAATTCATGTCTCCATCGGGACGCGTCCCCTTCATTAAGTGCGGTGCTTTTGTCGTATCCGAATTGGAGCCTATCGTTCAGTTTGCCGCGAACAAAGGTGTCACATTGTGTGCTCAACTTTCTACGGAGGAGAAAGCCGAGATGAGAGCGTATATGAGCCTCATTACTAATGTTTTGGTTAACGCCGAACTCTACATATCCTGGTTGGATAATGACACGTACAACGCGGTGACCAGAGTGAGGAACTCCTCAGTGTACCCATGGCCCTTAGGCTGGTTGCAGACTCGACAGAAACGTAATGCTGTAGCTAAGCGGCTGAAGGCTCTGCATTGGCACGAGAAGAGCCTCGACCAGGTTCTAGCTGACGTCGAACAGTGCTGCAACTCTTTGAGTCAAAGATTGGGCGATAAGGACTTCTTCTTCGGGACCACCCCAACGGAACTGGACGCTTTGATATTCGGTCACGTCTTCACGATCATCACGACCCGTCTCCCGTGCAGGAGGCTGGCAGAGACCGTTCGTAGGCACGAAACTCTCGTGTCTCTCGCGAAGAGAATCGACGAGAGATACTTCAAGAGGCCATAG
Protein
MPEFNLSDSIITSLNAQEPWPDNVKLYQPYEVEQILLPDNASCLAVQAFLKMCNLPFEVEMRWNAEFMSPSGRVPFIKCGAFVVSELEPIVQFAANKGVTLCAQLSTEEKAEMRAYMSLITNVLVNAELYISWLDNDTYNAVTRVRNSSVYPWPLGWLQTRQKRNAVAKRLKALHWHEKSLDQVLADVEQCCNSLSQRLGDKDFFFGTTPTELDALIFGHVFTIITTRLPCRRLAETVRRHETLVSLAKRIDERYFKRP

Summary

EMBL
GAIX01009553    JAA83007.1    AGBW02010065    OWR49265.1    KQ459593    KPI96558.1    + More
NWSH01008564    PCG62497.1    NWSH01003431    PCG66321.1    KQ460890    KPJ10980.1    GEZM01065029    JAV68589.1    KQ971351    EFA06445.2    GECZ01000996    JAS68773.1    NEVH01019380    PNF22529.1    KK853496    KDR07207.1    GL445059    EFN60236.1    GEBQ01030094    JAT09883.1    GL732551    EFX79513.1    ACPB03000431    BT126549    AEE61513.1    GDIQ01046035    JAN48702.1    GDIQ01235465    JAK16260.1    LRGB01000626    KZS17570.1    GDIQ01015864    JAN78873.1    GL452939    EFN76553.1    GDKW01002547    JAI54048.1    GDIP01028956    JAM74759.1    GDIP01165284    JAJ58118.1    GBGD01002567    JAC86322.1    GDIP01114064    JAL89650.1    IAAA01008121    IAAA01008122    IAAA01008123    LAA02537.1    GDIP01162806    JAJ60596.1    LJIG01009948    KRT82060.1    GDIQ01238965    JAK12760.1    KK116629    KFM68316.1    GALX01006807    JAB61659.1    GEDC01025494    GEDC01023474    GEDC01002463    JAS11804.1    JAS13824.1    JAS34835.1    GDIP01042824    JAM60891.1    GDIQ01136798    JAL14928.1    GEMB01002125    JAS01054.1    GECL01001461    JAP04663.1    KQ980794    KYN13036.1    APGK01019948    KB740150    ENN81246.1    KB632173    ERL89571.1    KQ978143    KYM96772.1    GFTR01005620    JAW10806.1    MWRG01000099    PRD37678.1    AZIM01000055    ETE73681.1    ADTU01026231    GAEP01000915    JAB53906.1    GBHO01016917    JAG26687.1    GBHO01037217    JAG06387.1    KQ976445    KYM86077.1    GL771847    EFZ09449.1    GBSH01001580    JAG67446.1    GDHC01005600    JAQ13029.1    GBHO01037221    GBRD01017345    JAG06383.1    JAG48482.1    GBHO01037225    GBRD01017348    JAG06379.1    JAG48479.1    GBHO01010616    JAG32988.1    GAHY01002373    JAA75137.1    GBHO01037219    GBRD01012968    JAG06385.1    JAG52858.1    AAWZ02025923    AAWZ02025924    GBHO01041616    JAG01988.1    GBHO01041627    JAG01977.1    GDAY02001388    JAV50039.1    GBRD01005679    JAG60142.1    GBHO01037222    GBRD01017346    JAG06382.1    JAG48481.1    GBHO01037218    GBRD01012969    JAG06386.1    JAG52857.1    GAAZ01001393    GBKC01002065    GBKD01001235    JAA96550.1    JAG44005.1    JAG46383.1    FJ824601    JX053336    ACU32593.1    AFK11564.1    JU175053    GBEX01001962    AFJ50577.1    JAI12598.1    GL888423    EGI61160.1    KZ288371    PBC26733.1    KQ768478    OAD53116.1    AHAT01020101    KB200129    ESP02991.1    GBSI01001348    JAC95148.1    BC073083    AAH73083.1    AGTP01035609    AGTP01035610    AMGL01052530    AMGL01052531    AMGL01052532    BC148004    AAI48005.1    ADFV01058807    ADFV01058808    ADFV01058809    KQ414608    KOC69459.1    KZ505689    PKU47063.1    AQIB01010144    AQIB01010145    AQIB01010146    AQIB01010147    AQIB01010148    AQIB01010149    AQIA01015100    AQIA01015101    AQIA01015102    AQIA01015103    CM001287    EHH54977.1    JSUE03009159    JU320393    JU474035    JV045142    AFE64149.1    AFH30839.1    AFI35213.1    QRBI01000096    RMC18514.1    AY553052    AAT02188.1    CM004483    OCT61176.1   
Pfam
PF10568   Tom37        + More
PF17171   GST_C_6
PF07743   HSCB_C
PF00226   DnaJ
Interpro
IPR019564   Sam37/metaxin_N        + More
IPR036282   Glutathione-S-Trfase_C_sf       
IPR033468   Metaxin_GST       
IPR040079   Glutathione_S-Trfase       
IPR036249   Thioredoxin-like_sf       
IPR010987   Glutathione-S-Trfase_C-like       
IPR001623   DnaJ_domain       
IPR036386   HscB_C_sf       
IPR004640   HscB       
IPR009073   HscB_oligo_C       
IPR036869   J_dom_sf       
SUPFAM
SSF47616   SSF47616        + More
SSF52833   SSF52833       
SSF47144   SSF47144       
SSF46565   SSF46565       
Gene 3D

Ontologies

Topology

Length:
259
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.61178
Exp number, first 60 AAs:
0.001
Total prob of N-in:
0.01395
outside
1  -  259
 
 

Population Genetic Test Statistics

Pi
233.993236
Theta
147.718053
Tajima's D
0.482232
CLR
0.252781
CSRT
0.506824658767062
Interpretation
Uncertain
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