Gene

KWMTBOMO00838  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009751

Annotation

60S_ribosomal_protein_L23_[Papilio_polytes]

Location

Bomo_Chr2(+):4103662-4106912      View in EpiBrowser

Full name

60S ribosomal protein L23      

Alternative Name

L17A

Location in the cell

Mitochondrial   Reliability : 1.457

CDS

ATGTCTAAGAGAGGACGTGGTGGTTCCGCGGGAGCGAAATTCCGTATCTCCCTGGGTCTCCCAGTGGGAGCAGTAATCAACTGCGCCGACAACACAGGGGCAAAGAATCTGTATGTGATCGCTGTCCAAGGTATCAAAGGTCGCCTGAACAGACTGCCGGCGGCCGGTTCCGGGGACATGATTGTGGCCACAGTCAAAAAGGGTAAACCTGAACTCCGGAAAAAGGTAATGCCGGCAGTGGTCATCAGGCAGCGGAAACCGTTCAGAAGGCGTGATGGAGTATTTATATACTTTGAGGACAATGCGGGTGTCATAGTCAATAACAAGGGCGAAATGAAGGGCTCGGCCATCACAGGGCCTGTAGCCAAAGAATGTGCTGATCTGTGGCCGCGTATTGCCTCAAACGCGAGCTCTATCGCTTGA

Protein

MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSIA

Similarity

Belongs to the universal ribosomal protein uL14 family.

Keywords

3D-structure   Complete proteome   Reference proteome   Ribonucleoprotein   Ribosomal protein  

Feature

chain  60S ribosomal protein L23

Uniprot

A0A0K8SRN0   Q6F469   A0A0L7LH74   A0A2A4J6M3   G0ZEF8   E7DZ40   + More
D1LYK3   A0A3G1T1M1   A0A212F6A5   Q5UAR6   Q962Y9   I4DM17   A0A194QZL0   I4DIM3   A0A222AIZ3   A0A232EWR8   A0A2R7X1T0   A0A0P4VUF7   K7ITK6   A0A2A3E633   V9IM76   A0A0M9ABL8   A0A088AHQ5   A0A0C9QH06   Q56FC6   A0A310SFS6   A0A1B6C0Q6   A0A1B6JN80   A0A069DW00   R4G4Z9   Q1W2B0   R4WCR9   R4UVH2   A0A067QGP5   A0A2P8Y3X2   A0A0X8NY01   A0A0J7KI10   A0A158NRB5   E2AUW4   A0A0A9WN28   E0VVN2   A0A1D1XKL0   A0A2H8TDE2   D6WRI6   A0A026X364   C4WRU2   Q0PXU8   A0A1W4X931   Q4GXH1   V5I9Q0   A0A2R5LGB1   A0A1Y1M7Q5   A0A023GE91   G3MMW4   C9W1F8   A0A224YQC9   Q4PM16   A0A0K8RHM7   A0A131Z6D0   A0A0C9S9S6   A0A023FTQ8   A0A131XP05   A0A1E1WYV1   A0A023FEP9   A2I414   A8C9Z7   A0A2A4APG4   N6UR62   F5GTX9   A0A2J7Q1R6   A0A0U1U016   A0A151IFQ1   A0A1Z5LGH5   A0A1L8DS35   A0A1W4VDN2   B4LMW0   A0A2C9NEC8   B4KSL0   A0A3B0JH02   A0A1A9V9C1   Q28X51   B4H515   B4P8L1   A0A0M4EEM3   A0A1I8QCT8   B3MEK3   B4MJM1   B4I8C4   B4J762   B3NNX4   A0A1A9ZPC1   A0A1A9WIA2   B4QI17   P48159   A0A0L7RF43   Q4GXH3   E2C326   A0A1I8M882   A0A151XHM2   A0A023EEN9  

Pubmed

26227816    22118469    19121390    14668217    22651552    26354079    + More
28648823    27129103    20075255    26334808    23691247    24845553    29403074    21347285    20798317    25401762    26823975    20566863    18362917    19820115    24508170    28004739    22216098    20650005    24029695    28797301    16431279    26830274    26131772    28049606    28503490    17760985    23537049    22182526    28528879    17994087    15632085    17550304    22936249    1511900    10731132    12537572    23636399    25315136    24945155   

EMBL

GBRD01009851    JAG55973.1    AB180421    BAD26665.1    JTDY01001158    KOB74714.1    + More
NWSH01002905    PCG67328.1    JF265036    AEL28867.1    HQ424743    ADT80687.1    GU084277    ACY95310.1    MG992448    AXY94886.1    AGBW02010065    OWR49267.1    BABH01017541    AY769292    AAV34834.1    AF395586    ODYU01006665    AAK83857.1    SOQ48708.1    AK402335    BAM18957.1    KQ460890    KPJ10978.1    AK401141    KQ459593    BAM17763.1    KPI96556.1    KY563810    ASO76336.1    NNAY01001826    OXU22794.1    KK856367    PTY25611.1    GDKW01000930    JAI55665.1    KZ288371    PBC26732.1    JR053143    AEY61862.1    KQ435689    KOX81215.1    GBYB01002759    JAG72526.1    AY961574    AAX62476.1    KQ768478    OAD53115.1    GEDC01030483    JAS06815.1    GECU01007077    JAT00630.1    GBGD01003400    JAC85489.1    ACPB03000431    GAHY01000930    JAA76580.1    DQ445517    GEBQ01022068    ABD98755.1    JAT17909.1    AK416949    BAN20164.1    KC632432    AGM32246.1    KK853496    KDR07208.1    PYGN01000956    PSN38939.1    KC507346    AHB12469.1    LBMM01007252    KMQ89902.1    ADTU01023845    GL442898    EFN62772.1    GBHO01034763    GBRD01008354    GDHC01021600    JAG08841.1    JAG57467.1    JAP97028.1    DS235812    EEB17438.1    GDJX01025085    JAT42851.1    GFXV01000322    MBW12127.1    KQ971351    EFA06574.1    KK107019    EZA62692.1    ABLF02033690    AK339915    BAH70612.1    DQ673438    ABG82011.1    AM049052    CAJ17291.1    GALX01002550    JAB65916.1    GGLE01004434    MBY08560.1    GEZM01037977    JAV81812.1    GBBM01003259    JAC32159.1    JO843215    AEO34832.1    EZ406106    ACX53905.1    GFPF01005615    MAA16761.1    DQ066312    AAY66949.1    GADI01003166    JAA70642.1    GEDV01002205    JAP86352.1    GBZX01003003    JAG89737.1    GBBL01002253    JAC25067.1    GEFH01001165    JAP67416.1    GFAC01006965    JAT92223.1    GBBK01004520    GBBK01004519    JAC19962.1    EF070517    ABM55583.1    EU035821    ABV44723.1    NWMT01000228    PCC98070.1    APGK01019948    KB740150    KB632173    ENN81247.1    ERL89572.1    JI626292    AEB96527.1    NEVH01019380    PNF22528.1    EU252183    ACD11780.1    KQ977771    KYM99986.1    GFJQ02000463    JAW06507.1    GFDF01004924    JAV09160.1    CH940648    EDW62075.1    CCAG010018977    CH933808    EDW09515.1    OUUW01000001    SPP74650.1    CM000071    EAL26465.1    CH479210    EDW32851.1    CM000158    EDW92228.1    CP012524    ALC41651.1    CH902619    EDV37623.1    CH963846    EDW72310.1    CH480824    EDW56849.1    CH916367    EDW02080.1    CH954179    EDV56707.1    CM000362    CM002911    EDX08271.1    KMY95891.1    M85295    AE013599    BT053700    KQ414608    KOC69460.1    AM049050    CAJ17289.1    GL452274    EFN77642.1    KQ982138    KYQ59710.1    GAPW01005756    JAC07842.1   

Proteomes

UP000037510    UP000218220    UP000007151    UP000005204    UP000053240    UP000053268    + More
UP000215335    UP000002358    UP000242457    UP000053105    UP000005203    UP000015103    UP000027135    UP000245037    UP000036403    UP000005205    UP000000311    UP000009046    UP000007266    UP000053097    UP000007819    UP000192223    UP000243750    UP000019118    UP000030742    UP000235965    UP000078542    UP000192221    UP000008792    UP000092444    UP000009192    UP000268350    UP000078200    UP000001819    UP000008744    UP000002282    UP000092553    UP000095300    UP000007801    UP000007798    UP000001292    UP000001070    UP000008711    UP000092445    UP000091820    UP000000304    UP000000803    UP000053825    UP000008237    UP000095301    UP000075809   

PRIDE

Q5UAR6    A0A088AHQ5    P48159   

Pfam

PF00238   Ribosomal_L14

Interpro

IPR000218   Ribosomal_L14P        + More
IPR019972   Ribosomal_L14P_CS       
IPR036853   Ribosomal_L14_sf       

SUPFAM

SSF50193   SSF50193       

Gene 3D

2.40.150.20    

ProteinModelPortal

A0A0K8SRN0   Q6F469   A0A0L7LH74   A0A2A4J6M3   G0ZEF8   E7DZ40   + More
D1LYK3   A0A3G1T1M1   A0A212F6A5   Q5UAR6   Q962Y9   I4DM17   A0A194QZL0   I4DIM3   A0A222AIZ3   A0A232EWR8   A0A2R7X1T0   A0A0P4VUF7   K7ITK6   A0A2A3E633   V9IM76   A0A0M9ABL8   A0A088AHQ5   A0A0C9QH06   Q56FC6   A0A310SFS6   A0A1B6C0Q6   A0A1B6JN80   A0A069DW00   R4G4Z9   Q1W2B0   R4WCR9   R4UVH2   A0A067QGP5   A0A2P8Y3X2   A0A0X8NY01   A0A0J7KI10   A0A158NRB5   E2AUW4   A0A0A9WN28   E0VVN2   A0A1D1XKL0   A0A2H8TDE2   D6WRI6   A0A026X364   C4WRU2   Q0PXU8   A0A1W4X931   Q4GXH1   V5I9Q0   A0A2R5LGB1   A0A1Y1M7Q5   A0A023GE91   G3MMW4   C9W1F8   A0A224YQC9   Q4PM16   A0A0K8RHM7   A0A131Z6D0   A0A0C9S9S6   A0A023FTQ8   A0A131XP05   A0A1E1WYV1   A0A023FEP9   A2I414   A8C9Z7   A0A2A4APG4   N6UR62   F5GTX9   A0A2J7Q1R6   A0A0U1U016   A0A151IFQ1   A0A1Z5LGH5   A0A1L8DS35   A0A1W4VDN2   B4LMW0   A0A2C9NEC8   B4KSL0   A0A3B0JH02   A0A1A9V9C1   Q28X51   B4H515   B4P8L1   A0A0M4EEM3   A0A1I8QCT8   B3MEK3   B4MJM1   B4I8C4   B4J762   B3NNX4   A0A1A9ZPC1   A0A1A9WIA2   B4QI17   P48159   A0A0L7RF43   Q4GXH3   E2C326   A0A1I8M882   A0A151XHM2   A0A023EEN9  

PDB

4V6W     E-value=2.15237e-64,     Score=616

KEGG

692699    K02894 large subunit ribosomal protein L23e | (RefSeq) RpL23; ribosomal protein L23

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0005840   GO:0006412   GO:0003735   GO:0022625   GO:0070180   GO:0017022   GO:0002181   GO:0051603   GO:0008270   GO:0043565   GO:0003677   GO:0004887   GO:0003707   GO:0016021  

PANTHER

PTHR11761  

Length:

140

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.17895

Exp number, first 60 AAs:

0.1774

Total prob of N-in:

0.25721

outside

1  -  140

 

 

Pi

210.016709

Theta

187.734927

Tajima's D

0.558631

CLR

1.03844

CSRT

0.530723463826809

Interpretation

Uncertain