Gene

KWMTBOMO00837  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009684

Annotation

PREDICTED:_proteasome_subunit_beta_type-4_[Amyelois_transitella]

Location

Bomo_Chr2(-):4099237-4102521      View in EpiBrowser

Full name

Proteasome subunit beta      

Location in the cell

Cytoplasmic   Reliability : 1.176

CDS

ATGGCTTTTATGGGGGACACGATGAACCCCACGCCGTTGTGGCAAAACGGACCGTCGCCTGGAGCATTTTATAATTTTCCTGGAAATGCTTCCACAATTGCTCCATCCAGGCACGGTGTACAGGATTTTACAGCTCACTCAGCGAGCCCCATCACGACCACCACAACTGTCATCGGAGTTAAGTTTGACAAGGGATGTGTTATCGCCGGTGACACACTGGGCTCGTACGGGTCATTGGCCCGGTTTCGAGACTGTCCCCGCGTGATGAAAGTCAATGACTTAATACTACTAGGCTGCGGAGGAGACTATGCTGATTTTCAGTATTTGAAGGATATCATTCAACAAAAAATCATTGATGAGCGCTGTGTTGGAGATGGTCTCCAGCTCAAGCCCCGTTCTCTGCACTGCTGGTTGACTCGTGTCCTCTACAACAAGAGGAGCAAGATGGATCCCCTCTGGAACAGCTATGTGGTTGCCGGTATTCAGGATGGTGAACCCTTTCTCGGAGCTGTTGATAAATTGGGAACAGCCTATGAAGATGCTGTGATCTCGAACGGGCTAGGAGCTTACATGGCGACTCCTCTACTGAGGGACGCAGTGGATAAAGGACCTCTGGACCAAGAAACTGCTATTGCGGTTGTACGTAAAAGTATGGAGGTGCTTTTCTACAGAGATGCTCGCGCGTTCCAACGCTACCAGCTCGGCGTGGTCACGGCTGAGGGAATAAAGATCACAGACGAGGAGCTCAAGCATGATTGGTCGTTGGCTCACATGATACAAATGAAGTGA

Protein

MAFMGDTMNPTPLWQNGPSPGAFYNFPGNASTIAPSRHGVQDFTAHSASPITTTTTVIGVKFDKGCVIAGDTLGSYGSLARFRDCPRVMKVNDLILLGCGGDYADFQYLKDIIQQKIIDERCVGDGLQLKPRSLHCWLTRVLYNKRSKMDPLWNSYVVAGIQDGEPFLGAVDKLGTAYEDAVISNGLGAYMATPLLRDAVDKGPLDQETAIAVVRKSMEVLFYRDARAFQRYQLGVVTAEGIKITDEELKHDWSLAHMIQMK

Catalytic Activity

Cleavage of peptide bonds with very broad specificity.

Subunit

The 26S proteasome consists of a 20S proteasome core and two 19S regulatory subunits.

Similarity

Belongs to the peptidase T1B family.

Uniprot

H9JJI3   A0A2H1W6J7   A0A2A4J617   A0A1E1WDG0   S4P1S9   A0A194QZU6   + More
I4DL87   A0A194PZG5   A0A1Y1MEW2   D6WTK4   A0A2P8YT67   A0A1B6GG72   A0A1B6K4B3   K7IPQ8   A0A232ERM7   A0A067QRU4   A0A1B6MSW4   E2AWR1   A0A0J7KKX3   F4WYJ3   A0A0L7RCZ9   E2BNX4   A0A195E3I7   A0A195F4G4   A0A1W4WKB4   A0A154P3I6   A0A151I2H5   A0A151K235   A0A310SJ20   A0A0M9AA60   A0A088AM79   A0A2A3EHE4   V9IL75   T1JMI3   A0A158P1G3   A0A151X7C1   V4A971   A0A0B7AYI7   A0A0L7LH29   E9G7M2   A0A210PN58   A0A3L8DVQ0   C3YDQ6   A0A1W5APG6   A0A0T6B449   A0A0P5Z2Y6   Q4SZT8   H3CIJ2   A0A1A8CY81   A0A1A8AVF5   A0A0P5FC83   A0A060XUI2   C1BGS6   A0A3B3XY46   A0A1S3PYJ0   A0A1B6CU75   D6R733   B5XFR6   A0A0P5HWG2   A0A3P9PRR1   A0A3P8YM14   A0A087XXP5   A0A3B3VXI3   A0A2T7PS28   A0A1S3JE44   A0A1A8SDP9   B5X5F6   A0A1S3JDE7   W5LMS4   H2RJK8   A0A2J7PD67   A8E7N8   A0A1A8IAE9   B5X7W0   A0A2I4CKW4   A0A3P8RYR9   N6TI04   A0A1A8M6R9   H3A4V7   B7NZD7   A0A0K8RM43   H3A4V6   A0A060VQY7   A0A1A8FV47   B5X9D0   A0A3P9CU85   Q90ZQ5   G1T918   A0A3B3QWW3   A0A2D0PWD6   E3TBP4   A0A131YAH7   A0A2U3W7W6   A0A146NLI0   A0A146MHN3   D2HBR7   J3JY13   G1L1C8   E0VBP9  

EC Number

3.4.25.1

Pubmed

19121390    23622113    26354079    22651552    28004739    18362917    + More
19820115    29403074    20075255    28648823    24845553    20798317    21719571    21347285    23254933    26227816    21292972    28812685    30249741    18563158    15496914    24755649    20433749    25069045    25329095    21551351    23594743    23537049    9215903    25186727    12457246    21993624    29240929    20634964    20010809    22516182    20566863   

EMBL

BABH01017541    ODYU01006665    SOQ48709.1    NWSH01002905    PCG67329.1    GDQN01006153    + More
JAT84901.1    GAIX01012335    JAA80225.1    KQ460890    KPJ10977.1    AK402055    BAM18677.1    KQ459593    KPI96555.1    GEZM01037901    JAV81857.1    KQ971354    EFA05833.1    PYGN01000374    PSN47440.1    GECZ01008363    JAS61406.1    GECU01001420    JAT06287.1    NNAY01002575    OXU21015.1    KK853011    KDR12542.1    GEBQ01000945    JAT39032.1    GL443403    EFN62137.1    LBMM01006160    KMQ90871.1    GL888450    EGI60725.1    KQ414615    KOC68670.1    GL449511    EFN82566.1    KQ979709    KYN19444.1    KQ981852    KYN34974.1    KQ434796    KZC05798.1    KQ976538    KYM81319.1    LKEX01009667    KYN50132.1    KQ762882    OAD55382.1    KQ435711    KOX79626.1    KZ288248    PBC31130.1    JR053230    AEY61883.1    JH431845    ADTU01006535    KQ982450    KYQ56271.1    KB200701    ESP00519.1    HACG01038983    CEK85848.1    JTDY01001158    KOB74710.1    GL732534    EFX84494.1    NEDP02005576    OWF37903.1    QOIP01000004    RLU24019.1    GG666504    EEN61525.1    LJIG01016021    KRT81853.1    GDIP01050016    LRGB01002076    JAM53699.1    KZS09320.1    CAAE01011492    CAF93844.1    HADZ01019854    HAEA01001890    SBP83795.1    HADY01020183    HAEJ01004842    SBP58668.1    GDIQ01257574    JAJ94150.1    FR905650    CDQ80754.1    BT073805    ACO08229.1    GEDC01020341    JAS16957.1    HM124771    ADF97632.1    BT049885    ACI69686.1    GDIQ01224114    JAK27611.1    AYCK01011407    PZQS01000002    PVD36233.1    HAEH01014303    HAEI01013310    SBS15779.1    BT046275    ACI66076.1    NEVH01026393    PNF14268.1    BX571688    HAED01007870    HAEE01013504    SBQ94082.1    BT047129    ACI66930.1    APGK01025883    KB740605    ENN80034.1    HAEF01011539    HAEG01010879    SBR52532.1    AFYH01247314    DP001034    ACJ74020.1    GADI01001653    JAA72155.1    FR904286    CDQ57373.1    HAEB01015467    HAEC01001930    SBQ61994.1    BT047649    ACI67450.1    AF361366    AAK51461.1    AAGW02000574    GU587768    ADO27730.1    GEFM01000346    JAP75450.1    GCES01154047    JAQ32275.1    GCES01167119    JAQ19203.1    GL192667    EFB28453.1    BT128136    AEE63097.1    ACTA01000202    DS235035    EEB10805.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007266    UP000245037    + More
UP000002358    UP000215335    UP000027135    UP000000311    UP000036403    UP000007755    UP000053825    UP000008237    UP000078492    UP000078541    UP000192223    UP000076502    UP000078540    UP000078542    UP000053105    UP000005203    UP000242457    UP000005205    UP000075809    UP000030746    UP000037510    UP000000305    UP000242188    UP000279307    UP000001554    UP000192224    UP000076858    UP000007303    UP000193380    UP000261480    UP000087266    UP000242638    UP000265140    UP000028760    UP000261500    UP000245119    UP000085678    UP000018467    UP000005226    UP000235965    UP000000437    UP000192220    UP000265080    UP000019118    UP000008672    UP000265160    UP000001811    UP000261540    UP000221080    UP000245340    UP000008912    UP000009046   

PRIDE

H9JJI3    A0A088AM79    A8E7N8   

Pfam

PF00227   Proteasome

Interpro

IPR016295   Proteasome_beta4        + More
IPR016050   Proteasome_bsu_CS       
IPR029055   Ntn_hydrolases_N       
IPR023333   Proteasome_suB-type       
IPR001353   Proteasome_sua/b       

SUPFAM

SSF56235   SSF56235       

Gene 3D

3.60.20.10    

CDD

cd03760  proteasome_beta_type_4

ProteinModelPortal

H9JJI3   A0A2H1W6J7   A0A2A4J617   A0A1E1WDG0   S4P1S9   A0A194QZU6   + More
I4DL87   A0A194PZG5   A0A1Y1MEW2   D6WTK4   A0A2P8YT67   A0A1B6GG72   A0A1B6K4B3   K7IPQ8   A0A232ERM7   A0A067QRU4   A0A1B6MSW4   E2AWR1   A0A0J7KKX3   F4WYJ3   A0A0L7RCZ9   E2BNX4   A0A195E3I7   A0A195F4G4   A0A1W4WKB4   A0A154P3I6   A0A151I2H5   A0A151K235   A0A310SJ20   A0A0M9AA60   A0A088AM79   A0A2A3EHE4   V9IL75   T1JMI3   A0A158P1G3   A0A151X7C1   V4A971   A0A0B7AYI7   A0A0L7LH29   E9G7M2   A0A210PN58   A0A3L8DVQ0   C3YDQ6   A0A1W5APG6   A0A0T6B449   A0A0P5Z2Y6   Q4SZT8   H3CIJ2   A0A1A8CY81   A0A1A8AVF5   A0A0P5FC83   A0A060XUI2   C1BGS6   A0A3B3XY46   A0A1S3PYJ0   A0A1B6CU75   D6R733   B5XFR6   A0A0P5HWG2   A0A3P9PRR1   A0A3P8YM14   A0A087XXP5   A0A3B3VXI3   A0A2T7PS28   A0A1S3JE44   A0A1A8SDP9   B5X5F6   A0A1S3JDE7   W5LMS4   H2RJK8   A0A2J7PD67   A8E7N8   A0A1A8IAE9   B5X7W0   A0A2I4CKW4   A0A3P8RYR9   N6TI04   A0A1A8M6R9   H3A4V7   B7NZD7   A0A0K8RM43   H3A4V6   A0A060VQY7   A0A1A8FV47   B5X9D0   A0A3P9CU85   Q90ZQ5   G1T918   A0A3B3QWW3   A0A2D0PWD6   E3TBP4   A0A131YAH7   A0A2U3W7W6   A0A146NLI0   A0A146MHN3   D2HBR7   J3JY13   G1L1C8   E0VBP9  

PDB

6MSK     E-value=1.6352e-69,     Score=665

KEGG

101746822    K02736 20S proteasome subunit beta 7 [EC:3.4.25.1] | (RefSeq) proteasome subunit beta type-4

PATHWAY

03050    Proteasome - Bombyx mori (domestic silkworm)

GO

GO:0005737   GO:0005634   GO:0004298   GO:0051603   GO:0005839   GO:0004175   GO:0010498   GO:0043161   GO:0010499   GO:0016021   GO:0002862   GO:0001530   GO:0008270   GO:0043565   GO:0003677   GO:0004887   GO:0003707  

PANTHER

PTHR11599:SF5  

Subcellular location

Cytoplasm  
Nucleus  

Length:

262

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00778999999999999

Exp number, first 60 AAs:

0.00296

Total prob of N-in:

0.03853

outside

1  -  262

 

 

Pi

195.829596

Theta

178.442056

Tajima's D

0.714383

CLR

12.131517

CSRT

0.584520773961302

Interpretation

Uncertain