SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00833  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA009749
Annotation
PREDICTED:_uncharacterized_protein_LOC101745407_isoform_X3_[Bombyx_mori]
Location
Bomo_Chr2(+):3955171-4011905      View in EpiBrowser
Transcription factor
MBD
Location in the cell
Nuclear   Reliability : 3.912
 

Sequence

CDS
ATGCTTCCGTACTGGGGCAGGGATGGGAGTGCCGGCGGGGCGGCGGCGCAGGCCCAGGCTCAAGCGCAGGCCGCGCTCTTCGGCTTCGGATCCCGGTACCCGCCGCCGACGACGCTCGGGGTCGCCGCCAACCAGGCAGCCTCGCTCGGCCTGCATCCGGCCGCAAGCGCAGCATGGTGGTCGATGGCTTCACACCTAGCCGCTCAGGACTATCTCGCTCGTCTCCAAGCCTCAGGCCTGAACTTCCCACCGCTGGGCGATCCGTATGCCGCACTATCAGCTTTATCTGGAAGCGGAATGAAGCAGAACAAGCCAGTCAAGCCGCCTGGAAGATCTGAGAGATCGGGCCGGAGCAGTACATCATCAAGCGCTTCCGCCAAGGAGAAGAGTCCGTCAACGAATAACTCCTCGCAACCGAATATGGCGGACTGGAGTTCCAATTACGGGTTCCCGAAGACCTCGTCTCCCTCAACAATGCATTCCCAGTCGTTGTCGAGTCTGGCCTCGCTCAACAGTCTAGTGTCAGCGCCCCATCAGCACAAGCCGGCCAAAACTAACCCGTCCTCTTCGCAGTCCAGGAAGTCGTCGTCGTCAGGTCCGTCGAAGAATAAGGAGCGCGAGCTTGCTCTGCTGCGTGGGGACCTCATGCTGGCGCAAGCCGCCGCGCACGGCGCCTACCACGCCGCCGTCGCCGCCGCTAAGGGCAAGAATATGTCTCCCTTATACCCCTTCGGAATGGGTTCAGAAAAGGACCGACACGCCGGATTTGACTCCCTCACAGGACTTCCACACACAATATTAAGTGATCCGGCGTCAGTACTGGGGGGAGTGAGGCTACCCCCGGATACGGAAATCATCAAGTACACCTCATCCCTGGCGGGTCCCAAGGCGCCCCCCGGTTCCACGAATAGAGGCAGGAAAAAGACCATATCCTTGGACCCTCCACAAGTGTCCGTGCATCCGTCGTCAGGGGACAGAAGCGCGCCGCTACCGAGTAAGAGGCCTAAGGTGGACGAGTACGGCGCGTCTCGCTCCTCGGTGGAAGTGATCCGACTACCCCACGGCAAGCAGGAGAGAGCGCACAATTCAACTCCGCCGCATAACTTCTCCGATTACGCAGGTATATCTCGGGAGCTGCTACAGACCATAGCTAGTCAGAGCGGCGTCAGCTTAGCGGCTTTGGAGAGGCAGCTGGCTGGTGCTACGCCCTCAGGAGAGTCAGGAGTCGGCATGAGCAAGTCCATCGGTGGCGAGCACAGCCCTCTGGACCTGGGTTCCAAGTCCGCTGACGACGACAAGCCCCTGAACCTATCGCTCAAGCCCACTCCCTCATGTACTCAAGCCTCAGATGCGCTGTCCCGACTGACGTCACTCAGCAGCTCGCTCAGCGCTTCCAACGACAGATCCTCCCGACGCAAGCCCGGCGCCAAGCCGCGCAGGGTGGCGCCCGACTTCGCGCAGGCAGACTCGCCGCGACCCAAGTCCAGCGGCAGCGAGGACAGCGAATCGGTGTCGGGCTGGCCATCCCGGGAAGGAAGGCCGCGGAACCTGGGCCGCGGGGTCAGCAAGCCCAAGAAGAACACGGTCGCCTCCCTGCTCGCACAGAGCCGCGCCCTCGGCCTGCGCCCCGCGCTGGCGCAGCAACTCCTCGGGGAAACCGACCTGGAGAAGCTGAAGGCGTTGCTGGGCGAGACGGCCAGCACGGACTCGGAGTGCCCGTCGGACAGCGGGCCCTCCGACTCGGACGCCAGCGACTCCAGCCGCCGCCCCAAGGAGTCCCAGCTCCGCCTGCCACTGGCTCTAGGCTGGAAGCGAGTGACCGTGATCCGAGGGTTGTCCCGGAACTGCAGCATCAAGGGAGACGTGAGCTACTCGCCGCCAGAGCCCCACGCCGCCCTCAAACTCAAGTCCATGCAGGAGTTGCAATCGTTTCTAGACTCGAATCCGTGTCCGCCGTTGTCCCTGGACAACTTCAGCTTTAGTTCGCGCGCGATCCTCGGCGAGTACGTGCAGCCCTGCGCCGACGTCGCCGACCCGCTGGTCTTCAACGAGACCGAGATCACCAAGAGGCTGGAGGAGGCGCGTGCGCTGAGCTCGCTGGGCAGCCGGCCCACGCCGCCGCCGCTGGACCGCCGCATGGAGCTGGCGCGCCTGCAGCAGGCCGCCCGGGACGCGCGCCGGGACCACTCCGTCCGCTCCAAGGACCAGGCGCGTCTAGTCAGAGAGCTGGAGAAGTCTGAGAAGGCTGAGCTGGCGAAGCGGGAGAAGGAGGCCAGGAGTCAGCAGCTGTTGGAGCACATCAACAAGAACCGAACCCAACTGACGATCGAGCCGGTGCCGTCGGTATCGAAGGAATGGAAAGTTCCAGATGTGTCGATGGGCCCCGCTAAGGCCCACAGAGAACGAGCCATGCCCCCGATAAGCTTGTCACTGATACCGGTCTGCTGCCCCAACGAATCCCCAATAAAGAACATTCTCGATTGGAAAGTCGAGCAAGAGGAATACAACGCTCTAGATAAAATGAAGGATTTCGCTGAAAAAGCAGCCTTCGATCTGCCGAAACGTAAAGACTATGATTATCTCAAAGCGGGCGATAAAAAAAAACCTCCCGACAAAGAGAACAATCTAGATAAGCTAATCGAGTCGTATTCTAGAATAACTGAGTTCATAAACGGCTGCGATTGGTCGAAACTGCAAACGGACAAAAAGACTGAAAACGCTGTGGCGTTAGAGAAAAAATACTTGGACGCTAAAAACGAATTCATGTCGCAAAACCTTAGCTTGATGCCGAAGGAGACCAAGAAATCGGTTCTCAAGGACGTGATCGATTTGAGCGAAGACGATGACGTCACGGATGTGGTTTCCAAAAAAATATTAAACCAAGGAACGTTTTGCGTCGGAAAAGACGGGGCTCTATCGATTTCCATACATCCATACAAAGATTACGGATCGGCTAAAAAGAGGAAACAGGAGGAGATAGAGAAGCAGAGGATGGAGGAGCAAGCTAAAAAACAACAGGAAAGAGAGATAAAAAGGCAACAAGCACTACTACTAAAAGAACAGGAAAGAGAAAGGAGACGCCAACACACAACTTTCATCCGGCAGCTAGACGCCAGGAGGAGATGGGAGGAGAGGGAGAGAAAAAAGCACCAGAACCTGCTGGACAGGTTGCTGGTCAAAGAGAAGAAGCTGCAGCAGAGACGAAAAGAGATGGAACTGCTTTCGGAATTGAGGCGACCTCAAGAAGACTCGACTCTCTCAGACCAGAAGCCACTGCCGACCCTAAACAGAATCCCGGGTCTGAAGTTAGCGGGGCAGGCCATGGCAGACATACTGCAAGTTTACGAGTTCATACACAACTTTGGACAAACTTTAGGATTCGAGGACCCGGGCATACCCCACCCGGGACGGCACACCACGCTGCTCGGTCACGCCATCCGGATGGGCGACATAACTCCTCACAACCTGAGCGAAGTGCTCCGGATATATTTGTATGCCAACGCTACCGGAGAGGTCAAGGCGTTGACAGGTCTGACGGCCGAGCGTGAGCGAGAGCGTCGCGTGGCGGACCACCACCAGACCGACGCAGAGATGGTGCACACCAGCGCCACCACGCGCAACGCCGCCTACTACGAGCATCTGCACAACAACGGGACCTACAAACTATCCGAGGCCCTGCGAGACAAGCCCTTCGTTGCCCTCAACGCCACGGTGAAGGCGAAGATCCTTGCCTTCCTCTGCAACGAGCTGCTTCAGAACAAGGCCGTGCTGCGGCAGATCGACGGCTCCCTGGAACATCTCACGCAGCTGAAGAAGGAACGGTACCTCATGGATATGAAGATCAGGAAAGTCCGCGTGCTGCACCAGCGGAAGCTGCGCGCCGAGCAGTCGGAGAAGCAGCAAGCTCTCGCGCTGGAGCGGATGCAGCGGCTCGTGGAGGAAAGCTCCGGCAACACGAGAGCTTCCCCGCACTCACACGACGAAGACCAACAGATGCACGAGAAACCAGAAACTCCGAAGAAGCAACCGAAGGAGCATGCGTTGACTCCCGAAGCCGACGACAAGACCGACTCGCCTTCACCTTACAAAGAACCCCAGCACGTTGAAGAAAGCGACAAGGAATTGTCGCCTTTAAAGGACTTGTCCAACGGCGTGAAGAGCAAGGAGCTGCTGAACAACAACAAGGAGGAGTGCGGGGGCGGCGACGCGTCCAAGCTGGACAAGGACAGCGTGCTGGGCGACGACGTGCTCAGCGACCCGGAGAGCGACGGCGCGCAGCACGACGAGGACGAAGACAAGAATTTATCAGCTGAAGAACTTTCGAGAAAGCTCGAGAAGCTTCTGAGGCAGTCGGAACAACAGCTGCAGCAGCTTCAGGCCGGCTCGCACGCACTCCGCGCCACTTGCTACGGACAGGACCGGTACTGGCGTCGCTACTGGTCCCTGGGTAAAGCCGGCGGCATCTTCGTTGAAGGGATGGAGTCTGCGCAGCCTGAGATCTTAATGTACCATGAGACCCTCGAAAACAACCTCGCCAGAGATAAGGATGAGATGTCTATTGCGAAAAAGAAAGAGGTGAAAGAGAAGATTGAGTCGCCGCCGGAGGAGGGAGACATCAGACCAGACGACACCGAGACTCAAGCGGAAGCTCTCAAATCGCAATTGGAACTGAAAAACATCAAGTCCGAACTCAACCTCAGCGACCACACCCAGATCATCAAGTACGAGCCGAACGTCAAACATGGCGCCTGTAAGGTTGAGGGCTCGTCAATAAAAATGGAGGAGAAGTTCATTCAGCACAAACAGAACAGCGAGGGTCAAGACATGCTGGACATTGAGGACTCCATACCGACCGCCTTCCTGGTTCAGAAGCCGACCCACAAGCCGCTGTACGCCGCCCAGGCCGAGCCCGCCGACCGGCCCCAGGAGATCGTCAAGGTGGAGAACGTCAAGGTCGAAACTCCAGAACAAGACACGAAGGACCAGCTGGTCAACAACCTGGAGGAGCTTCGCAAGATGGCCGAAGCCGTATCTTCGCAGCTCGACGCGGCTAAAAAAGCCGAGGAGATCAAACAGGAGAGTCTTAAGTCGGAGACCAGCGAACCTGACAGCGCTCAAGCGTACCTCCACTCGAAGATCTTAGAAGGAAAATGGTTCTCGATACTAAGGCACGAGAGTTCATTCTTGAACAGCATCAATGATGGAGACGACGTGGCGTACTGCGACAACGAGCACACGTGCGCCGAGGTGGCGGTGGCGCAGGGACACAAGTGGGACGTCTCCAACAACCTGCATCTGCTGCGCGACCCCAGCCTCTTCACGCTCAACAGCATGGTGACCAGCGTGCAGGTGCCCCCGCCCAGCGTGTGCGCCGACAGCAGCCTCACCATGTCCGGCCTGCACCCAGACGTGATGGAAGCCAGCCTGGCCGGGGACGCGGCGATGGATGAAGACGAGAACAAAGAACAGGAGAACGACTTAGAGAAGGAGCTCCAAGCGGACAGGCTGAAGCTTGACGCGGCGGCCCAGCGCGCCAAGGCGAGCAGCCTCACCAGCCTCGGCCTGCTCAACTTCAACGCGCTGTCCACCTACGTCACGTGCGACAGCCCGCCGCCCATACAGATGTCGCCCGACGAGCTCGAGCAGCTCGACTACTGCAAGATATACGGACTGCCCAAGAAGATCAGCGGGAACTTCGTGACCAGGGACCTCAGGCACGGCTGGTGGCGGATCACGGATTCCGAGCAGCTGAGGGCGCTGATGGAGGCTCTCCATCCGCGAGGAGTTCGAGAACGGGAGCTGCACGCGTCCTTCGTCAACCACCTACCGACCGCCAACAACAAGCTGCACATAGACCTGGGCGATGTCCCGGTCGATTTGGACCCGGGTAACCTAGACCCGGGTAGCGAGGACCCGGGTGAGCACTCCGCCGGGTACCCGCCACCCGACTCGCCCTCGTCGTACTGCGCGCTCACCGCGAGACGGGTCGATCTGAATCTATTGCAAATGGTAGAGCAGCTGGAGGAGCGCGTGGCGGCGGCGTCGCTGCAGACCAAGGGCTGGCGGCCGTCGCGCGGGGCGGCGGGGGCGGCGGCGGGGGGGTTGGGGGGCGCGGAGCTGGTGGCGCGCGCGCGGCTCAAGCTGGCGGCCGTGGAGGCGCACATTGAGAGGAGATACCTCAAACCGCCTTTGGTACAAAGGTATGCTAGCACAGCGGAAGCGAACCTGGGAGCGATGTTGTCAGGCGAGCACGGCAACACGTCCGCGCCGTCGCCGCAGAACTCTGACGGCGGGAACGAGTCTAAAGACAACAAGGGCATAGCCCGCGGGCTGGCCACGTGGAGGGACGCCGTGGCGCGCTGCAGCACGTCAGCGCAGCTCGCCATGCTGCTGCACGCGCTGGAGACCGCCGTCGCCTGGGACAAGAGCGTCATGAAAGCCAACTGTCAGTTTTGTCTGAACGGCGACAATGAGGATCAGCTGCTGCTCTGTGACGCGTGCGACAAGGGCTACCACACCTACTGCTTCAAGCCGCGGATGGACAAGATACCCGAGGGAGACTGGTACTGCTGGGAGTGCGTGAACAAGGCGCGCGGGGAGCGCGTGTGCATCGTGTGCGGCGGCGCCAGCCCGGGCCGCGTCATCCCGTGCGCGCTGTGCGTGCGGGCCTACCACCAGGACTGCCACTACCCGCCACTCGCCAAGAACCCGCGCGGCAAGTGGTACTGCAACAACTGCATATCGCGCGCGCCGCCCAAGAAGCCGCGCAACGCGAAGAAACGAGACAACAAGCACAAAGACAAGGACAAGGACAGCAGCCTCGAACTCGACCACAGCATGGCGCCCAGCCCGGCGCCTTCCCACGCGTCCTCCTCCACCGCGGCCGAGGAGGGCGCAGCCCCGGACGCCGCCGACCTGCCGCGGGACTGCACGCACGCTTGCATTACTGCGCCTGCAGCAGATCTACCTGAAGACGGTCCGCCGCCAGAGAAGAGGAGATCTCTCCAGTACGTCGGCGGCAACGGCGCGGTCCACGACGACGACCAGAGCATCGACAGCGAAGACAGAGACACTGAAAACGTTCCGGCGCCTCCCCGAGCCAAGAAAGAGAAGAATTCGGCCAAGAAACTCTTAAAGGAACTACAGTTTTGCAAGAACCTGCTCTGCGAGATGGAGTGCCACGAGCACGCGTGGCCGTTCCTGCTGCCGGTCAACAACAAGCAGTTCCCGCAGTACAAGAAGGTCATCAAGTGCCCCATGGACCTGTCCACCATCAAGAAGAAGTTGCAGGACAGCTCGTACAAGTGCAAGGAGGAGTTCGCCTCTGACGTCCGCCTCATCTTCAGCAACTGCGAGGTATTCAACGAGGACTACAGCCCGGTGGGGCGCGCCGGACACAACATGAGACAGTTCTTCGAGGAGAAGTGGACCCAAAGCTAA
Protein
MLPYWGRDGSAGGAAAQAQAQAQAALFGFGSRYPPPTTLGVAANQAASLGLHPAASAAWWSMASHLAAQDYLARLQASGLNFPPLGDPYAALSALSGSGMKQNKPVKPPGRSERSGRSSTSSSASAKEKSPSTNNSSQPNMADWSSNYGFPKTSSPSTMHSQSLSSLASLNSLVSAPHQHKPAKTNPSSSQSRKSSSSGPSKNKERELALLRGDLMLAQAAAHGAYHAAVAAAKGKNMSPLYPFGMGSEKDRHAGFDSLTGLPHTILSDPASVLGGVRLPPDTEIIKYTSSLAGPKAPPGSTNRGRKKTISLDPPQVSVHPSSGDRSAPLPSKRPKVDEYGASRSSVEVIRLPHGKQERAHNSTPPHNFSDYAGISRELLQTIASQSGVSLAALERQLAGATPSGESGVGMSKSIGGEHSPLDLGSKSADDDKPLNLSLKPTPSCTQASDALSRLTSLSSSLSASNDRSSRRKPGAKPRRVAPDFAQADSPRPKSSGSEDSESVSGWPSREGRPRNLGRGVSKPKKNTVASLLAQSRALGLRPALAQQLLGETDLEKLKALLGETASTDSECPSDSGPSDSDASDSSRRPKESQLRLPLALGWKRVTVIRGLSRNCSIKGDVSYSPPEPHAALKLKSMQELQSFLDSNPCPPLSLDNFSFSSRAILGEYVQPCADVADPLVFNETEITKRLEEARALSSLGSRPTPPPLDRRMELARLQQAARDARRDHSVRSKDQARLVRELEKSEKAELAKREKEARSQQLLEHINKNRTQLTIEPVPSVSKEWKVPDVSMGPAKAHRERAMPPISLSLIPVCCPNESPIKNILDWKVEQEEYNALDKMKDFAEKAAFDLPKRKDYDYLKAGDKKKPPDKENNLDKLIESYSRITEFINGCDWSKLQTDKKTENAVALEKKYLDAKNEFMSQNLSLMPKETKKSVLKDVIDLSEDDDVTDVVSKKILNQGTFCVGKDGALSISIHPYKDYGSAKKRKQEEIEKQRMEEQAKKQQEREIKRQQALLLKEQERERRRQHTTFIRQLDARRRWEERERKKHQNLLDRLLVKEKKLQQRRKEMELLSELRRPQEDSTLSDQKPLPTLNRIPGLKLAGQAMADILQVYEFIHNFGQTLGFEDPGIPHPGRHTTLLGHAIRMGDITPHNLSEVLRIYLYANATGEVKALTGLTAERERERRVADHHQTDAEMVHTSATTRNAAYYEHLHNNGTYKLSEALRDKPFVALNATVKAKILAFLCNELLQNKAVLRQIDGSLEHLTQLKKERYLMDMKIRKVRVLHQRKLRAEQSEKQQALALERMQRLVEESSGNTRASPHSHDEDQQMHEKPETPKKQPKEHALTPEADDKTDSPSPYKEPQHVEESDKELSPLKDLSNGVKSKELLNNNKEECGGGDASKLDKDSVLGDDVLSDPESDGAQHDEDEDKNLSAEELSRKLEKLLRQSEQQLQQLQAGSHALRATCYGQDRYWRRYWSLGKAGGIFVEGMESAQPEILMYHETLENNLARDKDEMSIAKKKEVKEKIESPPEEGDIRPDDTETQAEALKSQLELKNIKSELNLSDHTQIIKYEPNVKHGACKVEGSSIKMEEKFIQHKQNSEGQDMLDIEDSIPTAFLVQKPTHKPLYAAQAEPADRPQEIVKVENVKVETPEQDTKDQLVNNLEELRKMAEAVSSQLDAAKKAEEIKQESLKSETSEPDSAQAYLHSKILEGKWFSILRHESSFLNSINDGDDVAYCDNEHTCAEVAVAQGHKWDVSNNLHLLRDPSLFTLNSMVTSVQVPPPSVCADSSLTMSGLHPDVMEASLAGDAAMDEDENKEQENDLEKELQADRLKLDAAAQRAKASSLTSLGLLNFNALSTYVTCDSPPPIQMSPDELEQLDYCKIYGLPKKISGNFVTRDLRHGWWRITDSEQLRALMEALHPRGVRERELHASFVNHLPTANNKLHIDLGDVPVDLDPGNLDPGSEDPGEHSAGYPPPDSPSSYCALTARRVDLNLLQMVEQLEERVAAASLQTKGWRPSRGAAGAAAGGLGGAELVARARLKLAAVEAHIERRYLKPPLVQRYASTAEANLGAMLSGEHGNTSAPSPQNSDGGNESKDNKGIARGLATWRDAVARCSTSAQLAMLLHALETAVAWDKSVMKANCQFCLNGDNEDQLLLCDACDKGYHTYCFKPRMDKIPEGDWYCWECVNKARGERVCIVCGGASPGRVIPCALCVRAYHQDCHYPPLAKNPRGKWYCNNCISRAPPKKPRNAKKRDNKHKDKDKDSSLELDHSMAPSPAPSHASSSTAAEEGAAPDAADLPRDCTHACITAPAADLPEDGPPPEKRRSLQYVGGNGAVHDDDQSIDSEDRDTENVPAPPRAKKEKNSAKKLLKELQFCKNLLCEMECHEHAWPFLLPVNNKQFPQYKKVIKCPMDLSTIKKKLQDSSYKCKEEFASDVRLIFSNCEVFNEDYSPVGRAGHNMRQFFEEKWTQS

Summary

Uniprot
H9JJP8  
Pubmed
19121390   
EMBL
BABH01017524    BABH01017525    BABH01017526    BABH01017527    BABH01017528    BABH01017529    + More
BABH01017530   
Proteomes
UP000005204   
PRIDE
H9JJP8   
Pfam
PF00628   PHD        + More
PF00439   Bromodomain
PF02791   DDT
PF15613   WSD
PF01429   MBD
Interpro
IPR016177   DNA-bd_dom_sf        + More
IPR018501   DDT_dom       
IPR028941   WHIM2_dom       
IPR036427   Bromodomain-like_sf       
IPR001739   Methyl_CpG_DNA-bd       
IPR019787   Znf_PHD-finger       
IPR001965   Znf_PHD       
IPR013083   Znf_RING/FYVE/PHD       
IPR001487   Bromodomain       
IPR018247   EF_Hand_1_Ca_BS       
IPR018359   Bromodomain_CS       
IPR011011   Znf_FYVE_PHD       
SUPFAM
SSF54171   SSF54171        + More
SSF47370   SSF47370       
SSF57903   SSF57903       
Gene 3D
1.20.920.10     3.30.40.10    
ProteinModelPortal
H9JJP8  
PDB
2E7O     E-value=9.57229e-31,     Score=341

Ontologies

KEGG
101745407    no KO assigned | (RefSeq) uncharacterized LOC101745407
GO
GO:0003677   GO:0005634   GO:0046872   GO:0005515   GO:0008270   GO:0043565   GO:0004887   GO:0003707   GO:0016021  

Topology

Length:
2479
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01447
Exp number, first 60 AAs:
0.00932
Total prob of N-in:
0.00061
outside
1  -  2479
 
 

Population Genetic Test Statistics

Pi
246.843306
Theta
157.081194
Tajima's D
1.996907
CLR
0.20567
CSRT
0.87915604219789
Interpretation
Uncertain
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